EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000050741 (Gene tree)
Gene ID
293663
Gene Symbol
Rbm4
Alias
LOC293663
Full Name
RNA binding motif protein 4
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
9233 bases
Position
chr1:220039734-220048966
Accession
1306891
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000072133zf-CCHCPF00098.231.7e-0711
ENSRNOP00000072133RRM_5PF13893.62.5e-0812
ENSRNOP00000072133RRM_5PF13893.62.5e-0822
ENSRNOP00000059872RRM_5PF13893.61.1e-0611
ENSRNOP00000059872RRM_1PF00076.225.5e-3512
ENSRNOP00000059872RRM_1PF00076.225.5e-3522
ENSRNOP00000072133RRM_1PF00076.227.1e-3512
ENSRNOP00000072133RRM_1PF00076.227.1e-3522
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000067093-905XM_008760102ENSRNOP00000059872143 (aa)XP_008758324Q5U212
ENSRNOT00000087573-1444XM_008760101ENSRNOP00000072133365 (aa)XP_008758323D4A1W5
Gene Model
Click here to download ENSRNOG00000050741's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000050741's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000050741Rbm49830.000ENSRNOG00000016813Tia16930.000
ENSRNOG00000050741Rbm48830.201ENSRNOG00000011100AABR07040947.16330.201
ENSRNOG00000050741Rbm497100.000ENSRNOG00000061795Rbm4b10086.027
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000050741Rbm49972.131ENSG00000248643RBM14-RBM410071.858Homo_sapiens
ENSRNOG00000050741Rbm497100.000ENSG00000173914RBM4B97100.000Homo_sapiens
ENSRNOG00000050741Rbm410098.601ENSG00000173933RBM410098.601Homo_sapiens
ENSRNOG00000050741Rbm497100.000ENSAMEG00000010906RBM4B10087.671Ailuropoda_melanoleuca
ENSRNOG00000050741Rbm410096.721ENSAMEG00000010914RBM410096.721Ailuropoda_melanoleuca
ENSRNOG00000050741Rbm497100.000ENSANAG00000023478RBM4B97100.000Aotus_nancymaae
ENSRNOG00000050741Rbm410095.105ENSANAG00000033986-8795.105Aotus_nancymaae
ENSRNOG00000050741Rbm49798.551ENSBTAG00000031688RBM410093.699Bos_taurus
ENSRNOG00000050741Rbm497100.000ENSBTAG00000000423RBM4B10087.945Bos_taurus
ENSRNOG00000050741Rbm497100.000ENSCJAG00000013666RBM4B97100.000Callithrix_jacchus
ENSRNOG00000050741Rbm497100.000ENSCAFG00000012378RBM4B10087.397Canis_familiaris
ENSRNOG00000050741Rbm410096.721ENSCAFG00000012388RBM410096.721Canis_familiaris
ENSRNOG00000050741Rbm497100.000ENSCAFG00020015519RBM4B10087.397Canis_lupus_dingo
ENSRNOG00000050741Rbm410096.721ENSCAFG00020015515RBM410096.721Canis_lupus_dingo
ENSRNOG00000050741Rbm497100.000ENSCHIG00000008907RBM4B10087.945Capra_hircus
ENSRNOG00000050741Rbm49798.551ENSCHIG00000020613RBM410093.699Capra_hircus
ENSRNOG00000050741Rbm49485.981ENSTSYG00000036168-8685.981Carlito_syrichta
ENSRNOG00000050741Rbm46678.423ENSTSYG00000009580RBM4B9677.593Carlito_syrichta
ENSRNOG00000050741Rbm497100.000ENSCAPG00000009570RBM4B10087.123Cavia_aperea
ENSRNOG00000050741Rbm410099.301ENSCAPG00000016600RBM410099.301Cavia_aperea
ENSRNOG00000050741Rbm497100.000ENSCPOG00000013689RBM4B10087.123Cavia_porcellus
ENSRNOG00000050741Rbm410099.301ENSCPOG00000013194RBM410099.301Cavia_porcellus
ENSRNOG00000050741Rbm410095.804ENSCCAG00000007508-10095.804Cebus_capucinus
ENSRNOG00000050741Rbm49971.127ENSCCAG00000023319-10073.134Cebus_capucinus
ENSRNOG00000050741Rbm497100.000ENSCCAG00000016501RBM4B97100.000Cebus_capucinus
ENSRNOG00000050741Rbm497100.000ENSCATG00000035353RBM4B97100.000Cercocebus_atys
ENSRNOG00000050741Rbm497100.000ENSCLAG00000015287RBM4B10087.123Chinchilla_lanigera
ENSRNOG00000050741Rbm410099.301ENSCLAG00000014756RBM410099.301Chinchilla_lanigera
ENSRNOG00000050741Rbm497100.000ENSCSAG00000008361RBM4B10087.123Chlorocebus_sabaeus
ENSRNOG00000050741Rbm46290.351ENSCHOG00000009753RBM14-RBM410091.228Choloepus_hoffmanni
ENSRNOG00000050741Rbm497100.000ENSCHOG00000002892RBM4B10088.219Choloepus_hoffmanni
ENSRNOG00000050741Rbm410094.406ENSCPBG00000023800-10074.869Chrysemys_picta_bellii
ENSRNOG00000050741Rbm497100.000ENSCANG00000021868RBM4B97100.000Colobus_angolensis_palliatus
ENSRNOG00000050741Rbm497100.000ENSCGRG00001024693Rbm4b10086.301Cricetulus_griseus_chok1gshd
ENSRNOG00000050741Rbm4100100.000ENSCGRG00001016609-100100.000Cricetulus_griseus_chok1gshd
ENSRNOG00000050741Rbm4100100.000ENSCGRG00000010183-100100.000Cricetulus_griseus_crigri
ENSRNOG00000050741Rbm497100.000ENSCGRG00000012112Rbm4b10086.301Cricetulus_griseus_crigri
ENSRNOG00000050741Rbm410096.175ENSDNOG00000032390RBM410096.175Dasypus_novemcinctus
ENSRNOG00000050741Rbm49798.551ENSDNOG00000045639-10086.575Dasypus_novemcinctus
ENSRNOG00000050741Rbm497100.000ENSDNOG00000019500-10087.671Dasypus_novemcinctus
ENSRNOG00000050741Rbm497100.000ENSDORG00000029108Rbm4b10085.479Dipodomys_ordii
ENSRNOG00000050741Rbm410097.902ENSDORG00000004538-10097.902Dipodomys_ordii
ENSRNOG00000050741Rbm46261.674ENSETEG00000018142-10062.115Echinops_telfairi
ENSRNOG00000050741Rbm410096.438ENSEASG00005005064RBM410096.438Equus_asinus_asinus
ENSRNOG00000050741Rbm497100.000ENSEASG00005005068RBM4B10087.397Equus_asinus_asinus
ENSRNOG00000050741Rbm410096.438ENSECAG00000022940RBM410096.438Equus_caballus
ENSRNOG00000050741Rbm497100.000ENSECAG00000022987RBM4B10087.123Equus_caballus
ENSRNOG00000050741Rbm49797.826ENSEEUG00000000058RBM4B10086.339Erinaceus_europaeus
ENSRNOG00000050741Rbm497100.000ENSFCAG00000007394RBM4B97100.000Felis_catus
ENSRNOG00000050741Rbm410098.601ENSFCAG00000029651RBM410098.601Felis_catus
ENSRNOG00000050741Rbm49797.826ENSFALG00000002073-10069.272Ficedula_albicollis
ENSRNOG00000050741Rbm410099.301ENSFDAG00000005447RBM410099.301Fukomys_damarensis
ENSRNOG00000050741Rbm497100.000ENSFDAG00000015530RBM4B10087.123Fukomys_damarensis
ENSRNOG00000050741Rbm49991.603ENSFDAG00000013661-9691.603Fukomys_damarensis
ENSRNOG00000050741Rbm49797.826ENSGALG00000037946-10076.064Gallus_gallus
ENSRNOG00000050741Rbm49797.826ENSGALG00000040489-8497.826Gallus_gallus
ENSRNOG00000050741Rbm49797.101ENSGAGG00000008553-10075.196Gopherus_agassizii
ENSRNOG00000050741Rbm410097.203ENSGGOG00000011698RBM4B97100.000Gorilla_gorilla
ENSRNOG00000050741Rbm49877.143ENSGGOG00000043023-9878.102Gorilla_gorilla
ENSRNOG00000050741Rbm49789.855ENSHGLG00000002853-10073.425Heterocephalus_glaber_female
ENSRNOG00000050741Rbm410098.601ENSHGLG00000009991RBM410098.601Heterocephalus_glaber_female
ENSRNOG00000050741Rbm49765.942ENSHGLG00000000117-9565.479Heterocephalus_glaber_female
ENSRNOG00000050741Rbm497100.000ENSHGLG00000016412-10087.397Heterocephalus_glaber_female
ENSRNOG00000050741Rbm49789.855ENSHGLG00100020033-10074.499Heterocephalus_glaber_male
ENSRNOG00000050741Rbm497100.000ENSHGLG00100003978-10086.612Heterocephalus_glaber_male
ENSRNOG00000050741Rbm410098.601ENSHGLG00100003854RBM410098.601Heterocephalus_glaber_male
ENSRNOG00000050741Rbm410098.601ENSSTOG00000022811RBM410098.601Ictidomys_tridecemlineatus
ENSRNOG00000050741Rbm497100.000ENSSTOG00000011226RBM4B10087.397Ictidomys_tridecemlineatus
ENSRNOG00000050741Rbm49375.940ENSJJAG00000003168-9274.627Jaculus_jaculus
ENSRNOG00000050741Rbm49796.350ENSJJAG00000020870Rbm4b10084.110Jaculus_jaculus
ENSRNOG00000050741Rbm497100.000ENSLAFG00000002285RBM4B10084.973Loxodonta_africana
ENSRNOG00000050741Rbm497100.000ENSLAFG00000028147-10092.350Loxodonta_africana
ENSRNOG00000050741Rbm410097.902ENSMFAG00000033927RBM4B97100.000Macaca_fascicularis
ENSRNOG00000050741Rbm497100.000ENSMNEG00000043371RBM4B97100.000Macaca_nemestrina
ENSRNOG00000050741Rbm410097.902ENSMLEG00000028563RBM4B97100.000Mandrillus_leucophaeus
ENSRNOG00000050741Rbm497100.000ENSMAUG00000017027Rbm4b10084.658Mesocricetus_auratus
ENSRNOG00000050741Rbm49999.291ENSMICG00000003820RBM4B97100.000Microcebus_murinus
ENSRNOG00000050741Rbm410096.503ENSMICG00000047975-9996.503Microcebus_murinus
ENSRNOG00000050741Rbm410094.406ENSMICG00000003817-10094.406Microcebus_murinus
ENSRNOG00000050741Rbm497100.000ENSMOCG00000001835Rbm4b10085.205Microtus_ochrogaster
ENSRNOG00000050741Rbm49797.101ENSMODG00000008056-10088.347Monodelphis_domestica
ENSRNOG00000050741Rbm49972.678MGP_CAROLIEiJ_G0022514-10073.224Mus_caroli
ENSRNOG00000050741Rbm497100.000MGP_CAROLIEiJ_G0022515Rbm4b10085.753Mus_caroli
ENSRNOG00000050741Rbm4100100.000MGP_CAROLIEiJ_G0022516-100100.000Mus_caroli
ENSRNOG00000050741Rbm4100100.000ENSMUSG00000094936Rbm4100100.000Mus_musculus
ENSRNOG00000050741Rbm410097.203ENSMUSG00000033760Rbm4b9497.203Mus_musculus
ENSRNOG00000050741Rbm410098.082ENSMUSG00000096370Gm2199210098.082Mus_musculus
ENSRNOG00000050741Rbm4100100.000MGP_PahariEiJ_G0014013-100100.000Mus_pahari
ENSRNOG00000050741Rbm497100.000MGP_PahariEiJ_G0014012Rbm4b10085.205Mus_pahari
ENSRNOG00000050741Rbm410098.356MGP_PahariEiJ_G0014011-10098.356Mus_pahari
ENSRNOG00000050741Rbm410081.651MGP_SPRETEiJ_G0023430-10081.651Mus_spretus
ENSRNOG00000050741Rbm410081.651MGP_SPRETEiJ_G0023428-9481.651Mus_spretus
ENSRNOG00000050741Rbm410073.611MGP_SPRETEiJ_G0023429-10074.306Mus_spretus
ENSRNOG00000050741Rbm497100.000ENSMPUG00000003450RBM4B10087.945Mustela_putorius_furo
ENSRNOG00000050741Rbm410096.995ENSMPUG00000003443RBM410096.995Mustela_putorius_furo
ENSRNOG00000050741Rbm497100.000ENSMLUG00000001290RBM4B10086.027Myotis_lucifugus
ENSRNOG00000050741Rbm49797.826ENSMLUG00000004076RBM49593.113Myotis_lucifugus
ENSRNOG00000050741Rbm497100.000ENSNGAG00000016292Rbm4b10085.753Nannospalax_galili
ENSRNOG00000050741Rbm410098.601ENSNLEG00000035021RBM410098.601Nomascus_leucogenys
ENSRNOG00000050741Rbm410097.203ENSNLEG00000006213RBM4B97100.000Nomascus_leucogenys
ENSRNOG00000050741Rbm46284.649ENSMEUG00000005739-10084.649Notamacropus_eugenii
ENSRNOG00000050741Rbm49798.551ENSMEUG00000001445-10088.493Notamacropus_eugenii
ENSRNOG00000050741Rbm497100.000ENSOPRG00000009158RBM4B10087.671Ochotona_princeps
ENSRNOG00000050741Rbm49798.551ENSOPRG00000009149RBM410094.536Ochotona_princeps
ENSRNOG00000050741Rbm410097.203ENSODEG00000020039-10097.203Octodon_degus
ENSRNOG00000050741Rbm410077.622ENSODEG00000006635-10077.622Octodon_degus
ENSRNOG00000050741Rbm49799.275ENSODEG00000017696-10086.849Octodon_degus
ENSRNOG00000050741Rbm410095.804ENSODEG00000019143-10095.804Octodon_degus
ENSRNOG00000050741Rbm49686.861ENSODEG00000001866-10077.260Octodon_degus
ENSRNOG00000050741Rbm49799.275ENSOANG00000003143-8476.712Ornithorhynchus_anatinus
ENSRNOG00000050741Rbm49799.275ENSOANG00000011036-10083.014Ornithorhynchus_anatinus
ENSRNOG00000050741Rbm497100.000ENSOCUG00000006695LARK10087.397Oryctolagus_cuniculus
ENSRNOG00000050741Rbm410096.995ENSOCUG00000004731RBM410096.995Oryctolagus_cuniculus
ENSRNOG00000050741Rbm410096.448ENSOGAG00000015647RBM410096.448Otolemur_garnettii
ENSRNOG00000050741Rbm497100.000ENSOGAG00000015648RBM4B10087.397Otolemur_garnettii
ENSRNOG00000050741Rbm497100.000ENSOARG00000007759RBM4B10088.219Ovis_aries
ENSRNOG00000050741Rbm49798.551ENSOARG00000007700RBM410091.233Ovis_aries
ENSRNOG00000050741Rbm410097.203ENSPPAG00000015125RBM4B97100.000Pan_paniscus
ENSRNOG00000050741Rbm497100.000ENSPPRG00000003388RBM4B97100.000Panthera_pardus
ENSRNOG00000050741Rbm410098.601ENSPPRG00000003533RBM410098.601Panthera_pardus
ENSRNOG00000050741Rbm497100.000ENSPTIG00000015426RBM4B97100.000Panthera_tigris_altaica
ENSRNOG00000050741Rbm410099.301ENSPTIG00000016180RBM410099.301Panthera_tigris_altaica
ENSRNOG00000050741Rbm410097.203ENSPTRG00000003935RBM4B97100.000Pan_troglodytes
ENSRNOG00000050741Rbm497100.000ENSPANG00000020672RBM4B97100.000Papio_anubis
ENSRNOG00000050741Rbm49796.377ENSPSIG00000003477-9578.157Pelodiscus_sinensis
ENSRNOG00000050741Rbm49796.377ENSPSIG00000003430-10074.468Pelodiscus_sinensis
ENSRNOG00000050741Rbm497100.000ENSPEMG00000009144Rbm4b10086.027Peromyscus_maniculatus_bairdii
ENSRNOG00000050741Rbm497100.000ENSPPYG00000003010RBM4B10087.123Pongo_abelii
ENSRNOG00000050741Rbm410095.342ENSPPYG00000003012RBM410094.247Pongo_abelii
ENSRNOG00000050741Rbm49799.275ENSPCAG00000003393-10093.443Procavia_capensis
ENSRNOG00000050741Rbm497100.000ENSPCOG00000027885RBM4B97100.000Propithecus_coquereli
ENSRNOG00000050741Rbm410096.448ENSPVAG00000010486RBM410096.448Pteropus_vampyrus
ENSRNOG00000050741Rbm497100.000ENSPVAG00000010487RBM4B10087.671Pteropus_vampyrus
ENSRNOG00000050741Rbm497100.000ENSRBIG00000019394RBM4B97100.000Rhinopithecus_bieti
ENSRNOG00000050741Rbm49798.551ENSRROG00000032796-9098.592Rhinopithecus_roxellana
ENSRNOG00000050741Rbm497100.000ENSRROG00000032850RBM4B97100.000Rhinopithecus_roxellana
ENSRNOG00000050741Rbm49799.275ENSSBOG00000034474RBM4B9799.275Saimiri_boliviensis_boliviensis
ENSRNOG00000050741Rbm49799.275ENSSHAG00000008386-10086.849Sarcophilus_harrisii
ENSRNOG00000050741Rbm497100.000ENSSARG00000010710RBM4B10087.671Sorex_araneus
ENSRNOG00000050741Rbm410096.721ENSSSCG00000032437RBM410096.721Sus_scrofa
ENSRNOG00000050741Rbm49797.101ENSTGUG00000016779-9477.816Taeniopygia_guttata
ENSRNOG00000050741Rbm49698.400ENSTBEG00000003727-7098.636Tupaia_belangeri
ENSRNOG00000050741Rbm497100.000ENSTBEG00000003748RBM4B10085.753Tupaia_belangeri
ENSRNOG00000050741Rbm49798.551ENSTTRG00000011164RBM410093.443Tursiops_truncatus
ENSRNOG00000050741Rbm49799.275ENSTTRG00000011166RBM4B10087.397Tursiops_truncatus
ENSRNOG00000050741Rbm497100.000ENSUAMG00000004745RBM4B10087.945Ursus_americanus
ENSRNOG00000050741Rbm410098.601ENSUAMG00000014882RBM410098.601Ursus_americanus
ENSRNOG00000050741Rbm410099.301ENSUMAG00000011738-10099.301Ursus_maritimus
ENSRNOG00000050741Rbm49798.551ENSVPAG00000001949RBM410094.262Vicugna_pacos
ENSRNOG00000050741Rbm49799.275ENSVPAG00000001950RBM4B10087.397Vicugna_pacos
ENSRNOG00000050741Rbm497100.000ENSVVUG00000010619RBM4B10087.397Vulpes_vulpes
ENSRNOG00000050741Rbm410096.175ENSVVUG00000010622RBM410096.175Vulpes_vulpes
ENSRNOG00000050741Rbm49987.943ENSVVUG00000011717-9687.943Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000381regulation of alternative mRNA splicing, via spliceosome-IEAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISOProcess
GO:0002190cap-independent translational initiation-ISOProcess
GO:0002192IRES-dependent translational initiation of linear mRNA-IEAProcess
GO:0002192IRES-dependent translational initiation of linear mRNA-ISOProcess
GO:0003723RNA binding-IEAFunction
GO:0003723RNA binding-ISOFunction
GO:0003729mRNA binding-IEAFunction
GO:0003729mRNA binding-ISOFunction
GO:0003730mRNA 3'-UTR binding-ISOFunction
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005730nucleolus-IEAComponent
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0008270zinc ion binding-IEAFunction
GO:0010468regulation of gene expression-ISOProcess
GO:0010494cytoplasmic stress granule-IEAComponent
GO:0010494cytoplasmic stress granule-ISOComponent
GO:0016607nuclear speck-IEAComponent
GO:0016607nuclear speck-ISOComponent
GO:0017148negative regulation of translation-ISOProcess
GO:0030332cyclin binding-IEAFunction
GO:0030332cyclin binding-ISOFunction
GO:0031016pancreas development-ISOProcess
GO:0032055negative regulation of translation in response to stress-IEAProcess
GO:0032055negative regulation of translation in response to stress-ISOProcess
GO:0032922circadian regulation of gene expression-ISOProcess
GO:0035198miRNA binding-IEAFunction
GO:0035198miRNA binding-ISOFunction
GO:0035278miRNA mediated inhibition of translation-IEAProcess
GO:0035278miRNA mediated inhibition of translation-ISOProcess
GO:0035773insulin secretion involved in cellular response to glucose stimulus-ISOProcess
GO:0035883enteroendocrine cell differentiation-ISOProcess
GO:0036002pre-mRNA binding-ISOFunction
GO:0042593glucose homeostasis-ISOProcess
GO:0043153entrainment of circadian clock by photoperiod-ISOProcess
GO:0045727positive regulation of translation-ISOProcess
GO:0045947negative regulation of translational initiation-IEAProcess
GO:0045947negative regulation of translational initiation-ISOProcess
GO:0046626regulation of insulin receptor signaling pathway-ISOProcess
GO:0046685response to arsenic-containing substance-IEAProcess
GO:0046685response to arsenic-containing substance-ISOProcess
GO:0046822regulation of nucleocytoplasmic transport-IEAProcess
GO:0046822regulation of nucleocytoplasmic transport-ISOProcess
GO:0048471perinuclear region of cytoplasm-ISOComponent
GO:0051149positive regulation of muscle cell differentiation-IEAProcess
GO:0051149positive regulation of muscle cell differentiation-ISOProcess
GO:0097157pre-mRNA intronic binding-ISOFunction
GO:0097158pre-mRNA intronic pyrimidine-rich binding-IEAFunction
GO:0097158pre-mRNA intronic pyrimidine-rich binding-ISOFunction
GO:0097167circadian regulation of translation-ISOProcess

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