EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000050868 (Gene tree)
Gene ID: 682138
Gene Symbol: Ddx43
Alias: LOC682138
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 27429 bases
Position: chr8:85750082-85777510
Accession: 1586947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066094	KH_1	PF00013.29	2.5e-12	1	1
ENSRNOP00000066094	DEAD	PF00270.29	1.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072933	-	1941	XM_003750545	ENSRNOP00000066094	646 (aa)	XP_001060057	M0R9C6

Gene Model

Click here to download ENSRNOG00000050868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000050868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000050868	Ddx43	68	43.527	ENSRNOG00000051170	Ddx17	67	43.527
ENSRNOG00000050868	Ddx43	58	32.021	ENSRNOG00000001815	Eif4a2	92	31.563
ENSRNOG00000050868	Ddx43	60	39.259	ENSRNOG00000002501	Ddx3y	61	39.259
ENSRNOG00000050868	Ddx43	63	40.535	ENSRNOG00000060154	Ddx23	54	40.535
ENSRNOG00000050868	Ddx43	63	34.048	ENSRNOG00000002612	Ddx52	69	34.048
ENSRNOG00000050868	Ddx43	74	36.066	ENSRNOG00000009474	Ddx42	50	36.066
ENSRNOG00000050868	Ddx43	60	40.253	ENSRNOG00000026686	Ddx4	55	40.253
ENSRNOG00000050868	Ddx43	59	31.771	ENSRNOG00000053932	Ddx6	77	31.771
ENSRNOG00000050868	Ddx43	60	39.901	ENSRNOG00000057231	Ddx3	62	39.901
ENSRNOG00000050868	Ddx43	54	32.113	ENSRNOG00000045791	Eif4a3	84	32.113
ENSRNOG00000050868	Ddx43	53	32.143	ENSRNOG00000001043	Ddx55	59	32.143
ENSRNOG00000050868	Ddx43	54	30.051	ENSRNOG00000013040	Ddx31	57	30.051
ENSRNOG00000050868	Ddx43	60	34.663	ENSRNOG00000022368	Ddx49	81	34.663
ENSRNOG00000050868	Ddx43	64	36.557	ENSRNOG00000012771	Ddx41	66	36.557
ENSRNOG00000050868	Ddx43	57	40.568	ENSRNOG00000023383	Ddx3x	61	39.506
ENSRNOG00000050868	Ddx43	56	32.514	ENSRNOG00000030628	Eif4a1	92	31.332
ENSRNOG00000050868	Ddx43	59	35.678	ENSRNOG00000007838	Ddx47	85	35.678
ENSRNOG00000050868	Ddx43	68	44.519	ENSRNOG00000030680	Ddx5	71	44.519
ENSRNOG00000050868	Ddx43	59	34.278	ENSRNOG00000042451	Ddx59	61	34.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000050868	Ddx43	100	81.538	ENSAMEG00000007851	-	100	81.692	Ailuropoda_melanoleuca
ENSRNOG00000050868	Ddx43	100	76.507	ENSBTAG00000021814	-	99	76.507	Bos_taurus
ENSRNOG00000050868	Ddx43	99	75.311	ENSCAFG00020002717	-	99	75.311	Canis_lupus_dingo
ENSRNOG00000050868	Ddx43	100	80.650	ENSCAFG00020010029	-	100	80.650	Canis_lupus_dingo
ENSRNOG00000050868	Ddx43	100	76.662	ENSCHIG00000017351	-	99	76.662	Capra_hircus
ENSRNOG00000050868	Ddx43	78	81.673	ENSCAPG00000004247	-	100	81.673	Cavia_aperea
ENSRNOG00000050868	Ddx43	100	85.935	ENSCPOG00000003991	-	100	86.090	Cavia_porcellus
ENSRNOG00000050868	Ddx43	100	78.395	ENSCLAG00000010261	-	100	78.858	Chinchilla_lanigera
ENSRNOG00000050868	Ddx43	61	79.290	ENSCHOG00000003450	-	69	79.290	Choloepus_hoffmanni
ENSRNOG00000050868	Ddx43	100	95.046	ENSCGRG00001001145	Ddx43	100	95.046	Cricetulus_griseus_chok1gshd
ENSRNOG00000050868	Ddx43	87	96.625	ENSCGRG00000010217	Ddx43	100	96.625	Cricetulus_griseus_crigri
ENSRNOG00000050868	Ddx43	100	82.462	ENSDNOG00000017589	-	99	82.462	Dasypus_novemcinctus
ENSRNOG00000050868	Ddx43	100	86.862	ENSDORG00000030010	Ddx43	100	87.635	Dipodomys_ordii
ENSRNOG00000050868	Ddx43	80	89.971	ENSETEG00000001887	-	81	89.971	Echinops_telfairi
ENSRNOG00000050868	Ddx43	100	82.380	ENSEASG00005004346	-	89	82.380	Equus_asinus_asinus
ENSRNOG00000050868	Ddx43	100	82.226	ENSECAG00000017971	DDX43	98	82.226	Equus_caballus
ENSRNOG00000050868	Ddx43	100	79.907	ENSFCAG00000031631	-	99	79.907	Felis_catus
ENSRNOG00000050868	Ddx43	87	87.567	ENSHGLG00000001118	-	100	87.567	Heterocephalus_glaber_female
ENSRNOG00000050868	Ddx43	92	85.882	ENSHGLG00100011895	-	99	83.176	Heterocephalus_glaber_male
ENSRNOG00000050868	Ddx43	87	80.639	ENSSTOG00000032538	-	100	80.639	Ictidomys_tridecemlineatus
ENSRNOG00000050868	Ddx43	100	88.563	ENSJJAG00000014184	Ddx43	100	89.490	Jaculus_jaculus
ENSRNOG00000050868	Ddx43	93	84.959	ENSLAFG00000012755	-	100	84.298	Loxodonta_africana
ENSRNOG00000050868	Ddx43	100	93.653	ENSMAUG00000001441	Ddx43	100	93.498	Mesocricetus_auratus
ENSRNOG00000050868	Ddx43	100	94.453	ENSMOCG00000012956	Ddx43	100	94.299	Microtus_ochrogaster
ENSRNOG00000050868	Ddx43	100	97.833	MGP_CAROLIEiJ_G0032467	Ddx43	100	97.833	Mus_caroli
ENSRNOG00000050868	Ddx43	100	98.452	ENSMUSG00000070291	Ddx43	100	98.452	Mus_musculus
ENSRNOG00000050868	Ddx43	100	82.998	MGP_PahariEiJ_G0015333	Ddx43	100	82.998	Mus_pahari
ENSRNOG00000050868	Ddx43	100	98.452	MGP_SPRETEiJ_G0033607	Ddx43	100	98.452	Mus_spretus
ENSRNOG00000050868	Ddx43	100	81.607	ENSMPUG00000004342	-	99	81.607	Mustela_putorius_furo
ENSRNOG00000050868	Ddx43	100	83.103	ENSMLUG00000017604	-	100	83.257	Myotis_lucifugus
ENSRNOG00000050868	Ddx43	100	93.189	ENSNGAG00000015102	Ddx43	100	93.189	Nannospalax_galili
ENSRNOG00000050868	Ddx43	75	91.071	ENSOPRG00000013523	-	86	91.071	Ochotona_princeps
ENSRNOG00000050868	Ddx43	84	85.662	ENSODEG00000016207	-	99	85.662	Octodon_degus
ENSRNOG00000050868	Ddx43	100	78.053	ENSOCUG00000006338	-	100	78.516	Oryctolagus_cuniculus
ENSRNOG00000050868	Ddx43	98	65.827	ENSOCUG00000025811	-	98	65.827	Oryctolagus_cuniculus
ENSRNOG00000050868	Ddx43	100	76.198	ENSOARG00000010873	-	99	76.198	Ovis_aries
ENSRNOG00000050868	Ddx43	100	80.216	ENSPTIG00000017842	-	99	80.216	Panthera_tigris_altaica
ENSRNOG00000050868	Ddx43	87	98.046	ENSPEMG00000023986	Ddx43	100	98.046	Peromyscus_maniculatus_bairdii
ENSRNOG00000050868	Ddx43	99	81.115	ENSPCAG00000005962	-	99	81.734	Procavia_capensis
ENSRNOG00000050868	Ddx43	87	88.298	ENSPVAG00000012718	-	99	88.298	Pteropus_vampyrus
ENSRNOG00000050868	Ddx43	84	86.106	ENSSARG00000013493	-	99	86.106	Sorex_araneus
ENSRNOG00000050868	Ddx43	100	77.898	ENSSSCG00000004287	-	99	78.516	Sus_scrofa
ENSRNOG00000050868	Ddx43	87	73.712	ENSTTRG00000001488	-	99	73.712	Tursiops_truncatus
ENSRNOG00000050868	Ddx43	83	77.941	ENSUAMG00000012894	-	83	78.125	Ursus_americanus
ENSRNOG00000050868	Ddx43	100	81.327	ENSUMAG00000012291	-	99	81.481	Ursus_maritimus
ENSRNOG00000050868	Ddx43	94	72.623	ENSVPAG00000004969	-	100	73.115	Vicugna_pacos
ENSRNOG00000050868	Ddx43	100	80.341	ENSVVUG00000013908	-	100	80.371	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function