EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000051383 (Gene tree)
Gene ID: 297962
Gene Symbol: Srsf12
Alias: LOC297962|RGD1561162|Srrp|Srrp35
Full Name: serine and arginine rich splicing factor 12
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 29156 bases
Position: chr5:48456757-48485912
Accession: 1561162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000072223	RRM_1	PF00076.22	1.8e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091482	-	2641	-	ENSRNOP00000072223	241 (aa)	-	A0A0G2K2F4

Gene Model

Click here to download ENSRNOG00000051383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000051383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000051383	Srsf12	100	78.544	ENSG00000154548	SRSF12	100	83.525	Homo_sapiens
ENSRNOG00000051383	Srsf12	100	75.573	ENSAMEG00000000418	SRSF12	100	80.534	Ailuropoda_melanoleuca
ENSRNOG00000051383	Srsf12	100	72.993	ENSANAG00000023238	SRSF12	100	77.737	Aotus_nancymaae
ENSRNOG00000051383	Srsf12	100	78.544	ENSBTAG00000046235	SRSF12	100	83.525	Bos_taurus
ENSRNOG00000051383	Srsf12	100	77.481	ENSCJAG00000038575	SRSF12	100	82.443	Callithrix_jacchus
ENSRNOG00000051383	Srsf12	91	77.917	ENSCAFG00000030745	SRSF12	75	83.333	Canis_familiaris
ENSRNOG00000051383	Srsf12	100	79.693	ENSCAFG00020015999	SRSF12	100	84.674	Canis_lupus_dingo
ENSRNOG00000051383	Srsf12	100	77.481	ENSCHIG00000014596	SRSF12	100	82.443	Capra_hircus
ENSRNOG00000051383	Srsf12	91	76.667	ENSTSYG00000001269	SRSF12	98	81.250	Carlito_syrichta
ENSRNOG00000051383	Srsf12	96	73.333	ENSCAPG00000001547	SRSF12	100	78.039	Cavia_aperea
ENSRNOG00000051383	Srsf12	91	76.569	ENSCPOG00000010917	SRSF12	100	81.590	Cavia_porcellus
ENSRNOG00000051383	Srsf12	100	78.544	ENSCCAG00000033029	SRSF12	100	83.525	Cebus_capucinus
ENSRNOG00000051383	Srsf12	100	78.544	ENSCATG00000030620	SRSF12	100	83.525	Cercocebus_atys
ENSRNOG00000051383	Srsf12	91	77.406	ENSCLAG00000013868	SRSF12	100	82.845	Chinchilla_lanigera
ENSRNOG00000051383	Srsf12	100	77.863	ENSCSAG00000017325	SRSF12	100	82.824	Chlorocebus_sabaeus
ENSRNOG00000051383	Srsf12	76	73.399	ENSCHOG00000013911	SRSF12	100	79.803	Choloepus_hoffmanni
ENSRNOG00000051383	Srsf12	91	76.349	ENSCANG00000038708	SRSF12	100	81.743	Colobus_angolensis_palliatus
ENSRNOG00000051383	Srsf12	91	87.448	ENSCGRG00000017064	Srsf12	100	87.448	Cricetulus_griseus_crigri
ENSRNOG00000051383	Srsf12	71	95.455	ENSETEG00000001386	SRSF12	72	95.455	Echinops_telfairi
ENSRNOG00000051383	Srsf12	100	78.626	ENSEASG00005005686	SRSF12	100	83.588	Equus_asinus_asinus
ENSRNOG00000051383	Srsf12	100	79.310	ENSECAG00000019135	SRSF12	100	84.291	Equus_caballus
ENSRNOG00000051383	Srsf12	100	77.863	ENSEEUG00000011026	SRSF12	100	82.824	Erinaceus_europaeus
ENSRNOG00000051383	Srsf12	100	80.077	ENSFCAG00000029256	SRSF12	100	85.057	Felis_catus
ENSRNOG00000051383	Srsf12	91	76.569	ENSFDAG00000003699	SRSF12	100	82.008	Fukomys_damarensis
ENSRNOG00000051383	Srsf12	91	76.987	ENSGGOG00000024850	SRSF12	97	82.427	Gorilla_gorilla
ENSRNOG00000051383	Srsf12	100	78.544	ENSHGLG00000001138	SRSF12	100	83.142	Heterocephalus_glaber_female
ENSRNOG00000051383	Srsf12	91	76.569	ENSHGLG00100005391	SRSF12	82	81.590	Heterocephalus_glaber_male
ENSRNOG00000051383	Srsf12	100	78.244	ENSSTOG00000007170	SRSF12	100	83.206	Ictidomys_tridecemlineatus
ENSRNOG00000051383	Srsf12	78	59.833	ENSLACG00000004376	SRSF12	97	62.637	Latimeria_chalumnae
ENSRNOG00000051383	Srsf12	91	75.934	ENSLAFG00000005458	SRSF12	100	81.328	Loxodonta_africana
ENSRNOG00000051383	Srsf12	100	78.544	ENSMFAG00000036543	SRSF12	100	83.525	Macaca_fascicularis
ENSRNOG00000051383	Srsf12	100	77.863	ENSMMUG00000014941	SRSF12	100	82.824	Macaca_mulatta
ENSRNOG00000051383	Srsf12	100	78.544	ENSMNEG00000030957	SRSF12	100	83.525	Macaca_nemestrina
ENSRNOG00000051383	Srsf12	91	76.763	ENSMLEG00000042204	SRSF12	100	82.158	Mandrillus_leucophaeus
ENSRNOG00000051383	Srsf12	97	87.352	ENSMAUG00000017845	Srsf12	100	87.352	Mesocricetus_auratus
ENSRNOG00000051383	Srsf12	100	78.927	ENSMICG00000034783	SRSF12	100	83.908	Microcebus_murinus
ENSRNOG00000051383	Srsf12	100	87.739	ENSMOCG00000006973	Srsf12	100	87.739	Microtus_ochrogaster
ENSRNOG00000051383	Srsf12	98	68.482	ENSMODG00000018282	SRSF12	100	70.543	Monodelphis_domestica
ENSRNOG00000051383	Srsf12	100	95.851	MGP_CAROLIEiJ_G0025873	-	100	95.851	Mus_caroli
ENSRNOG00000051383	Srsf12	100	89.272	ENSMUSG00000054679	Srsf12	100	89.272	Mus_musculus
ENSRNOG00000051383	Srsf12	100	96.680	MGP_PahariEiJ_G0023996	-	100	96.680	Mus_pahari
ENSRNOG00000051383	Srsf12	100	89.272	MGP_SPRETEiJ_G0026822	-	100	89.272	Mus_spretus
ENSRNOG00000051383	Srsf12	91	74.899	ENSMLUG00000001545	SRSF12	100	80.162	Myotis_lucifugus
ENSRNOG00000051383	Srsf12	100	78.161	ENSNGAG00000019092	Srsf12	100	83.908	Nannospalax_galili
ENSRNOG00000051383	Srsf12	91	76.349	ENSNLEG00000032347	SRSF12	100	81.743	Nomascus_leucogenys
ENSRNOG00000051383	Srsf12	91	73.333	ENSOPRG00000016052	SRSF12	100	78.750	Ochotona_princeps
ENSRNOG00000051383	Srsf12	100	72.901	ENSODEG00000009174	-	100	77.863	Octodon_degus
ENSRNOG00000051383	Srsf12	95	76.707	ENSOCUG00000000945	SRSF12	100	82.329	Oryctolagus_cuniculus
ENSRNOG00000051383	Srsf12	91	75.417	ENSOGAG00000006421	SRSF12	100	80.833	Otolemur_garnettii
ENSRNOG00000051383	Srsf12	100	72.137	ENSPPAG00000041573	SRSF12	99	77.692	Pan_paniscus
ENSRNOG00000051383	Srsf12	100	80.077	ENSPPRG00000018838	SRSF12	100	85.057	Panthera_pardus
ENSRNOG00000051383	Srsf12	100	78.544	ENSPTRG00000018415	SRSF12	100	83.525	Pan_troglodytes
ENSRNOG00000051383	Srsf12	100	77.863	ENSPANG00000016731	SRSF12	100	82.824	Papio_anubis
ENSRNOG00000051383	Srsf12	100	86.973	ENSPEMG00000006893	Srsf12	100	86.973	Peromyscus_maniculatus_bairdii
ENSRNOG00000051383	Srsf12	100	70.000	ENSPCIG00000021713	SRSF12	100	72.031	Phascolarctos_cinereus
ENSRNOG00000051383	Srsf12	100	75.191	ENSPPYG00000016837	SRSF12	100	80.153	Pongo_abelii
ENSRNOG00000051383	Srsf12	100	69.349	ENSPCAG00000010020	SRSF12	75	96.591	Procavia_capensis
ENSRNOG00000051383	Srsf12	100	78.626	ENSPCOG00000001227	SRSF12	100	83.588	Propithecus_coquereli
ENSRNOG00000051383	Srsf12	91	76.667	ENSPVAG00000001046	SRSF12	100	82.083	Pteropus_vampyrus
ENSRNOG00000051383	Srsf12	91	76.987	ENSRBIG00000029756	SRSF12	97	82.427	Rhinopithecus_bieti
ENSRNOG00000051383	Srsf12	99	78.378	ENSRROG00000035967	SRSF12	100	83.398	Rhinopithecus_roxellana
ENSRNOG00000051383	Srsf12	91	71.146	ENSSBOG00000032399	SRSF12	100	76.285	Saimiri_boliviensis_boliviensis
ENSRNOG00000051383	Srsf12	91	76.763	ENSSARG00000007795	SRSF12	100	82.158	Sorex_araneus
ENSRNOG00000051383	Srsf12	91	64.435	ENSSPUG00000001194	SRSF12	97	67.300	Sphenodon_punctatus
ENSRNOG00000051383	Srsf12	100	79.310	ENSSSCG00000032781	SRSF12	100	84.291	Sus_scrofa
ENSRNOG00000051383	Srsf12	91	79.079	ENSTBEG00000008665	-	100	79.079	Tupaia_belangeri
ENSRNOG00000051383	Srsf12	68	73.333	ENSTBEG00000015120	-	100	78.431	Tupaia_belangeri
ENSRNOG00000051383	Srsf12	100	79.771	ENSTTRG00000003682	SRSF12	100	79.389	Tursiops_truncatus
ENSRNOG00000051383	Srsf12	98	77.132	ENSUMAG00000010534	SRSF12	98	77.132	Ursus_maritimus
ENSRNOG00000051383	Srsf12	100	72.519	ENSVPAG00000004175	SRSF12	100	77.481	Vicugna_pacos
ENSRNOG00000051383	Srsf12	95	75.806	ENSVVUG00000010197	SRSF12	99	81.048	Vulpes_vulpes
ENSRNOG00000051383	Srsf12	99	61.132	ENSXETG00000005385	srsf12	97	66.409	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0000395	mRNA 5'-splice site recognition	21873635.	IBA	Process
GO:0000395	mRNA 5'-splice site recognition	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process