EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000052279 (Gene tree)
Gene ID: 103692169
Gene Symbol: LOC103692169
Alias: LOC362388
Full Name: 39S ribosomal protein L53%2C mitochondrial
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 888 bases
Position: chr4:114807765-114808652
Accession: 9457461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070134	MRP_L53	PF10780.9	8.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000084616	-	614	XM_008763084	ENSRNOP00000070134	119 (aa)	XP_008761306	B2RYW4

Gene Model

Click here to download ENSRNOG00000052279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000052279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000052279	LOC103692169	100	100.000	ENSRNOG00000053109	Mrpl53	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000052279	LOC103692169	92	86.239	ENSG00000204822	MRPL53	84	91.489	Homo_sapiens
ENSRNOG00000052279	LOC103692169	100	81.513	ENSAMEG00000017229	MRPL53	84	91.489	Ailuropoda_melanoleuca
ENSRNOG00000052279	LOC103692169	92	85.321	ENSANAG00000032295	MRPL53	84	90.426	Aotus_nancymaae
ENSRNOG00000052279	LOC103692169	91	88.889	ENSBTAG00000016599	MRPL53	84	93.617	Bos_taurus
ENSRNOG00000052279	LOC103692169	92	86.239	ENSCJAG00000043158	MRPL53	84	91.489	Callithrix_jacchus
ENSRNOG00000052279	LOC103692169	97	82.759	ENSCAFG00020014067	MRPL53	99	81.897	Canis_lupus_dingo
ENSRNOG00000052279	LOC103692169	97	67.826	ENSCHIG00000020713	-	98	66.957	Capra_hircus
ENSRNOG00000052279	LOC103692169	91	87.963	ENSCHIG00000009415	-	84	92.553	Capra_hircus
ENSRNOG00000052279	LOC103692169	91	82.407	ENSCHIG00000021224	-	73	86.170	Capra_hircus
ENSRNOG00000052279	LOC103692169	100	80.672	ENSTSYG00000002278	-	100	79.832	Carlito_syrichta
ENSRNOG00000052279	LOC103692169	99	68.644	ENSTSYG00000037574	-	92	68.644	Carlito_syrichta
ENSRNOG00000052279	LOC103692169	97	75.862	ENSCPOG00000035123	MRPL53	100	73.950	Cavia_porcellus
ENSRNOG00000052279	LOC103692169	92	86.239	ENSCCAG00000025749	MRPL53	84	91.489	Cebus_capucinus
ENSRNOG00000052279	LOC103692169	92	87.156	ENSCATG00000009492	MRPL53	84	91.489	Cercocebus_atys
ENSRNOG00000052279	LOC103692169	97	78.448	ENSCLAG00000005239	MRPL53	100	76.471	Chinchilla_lanigera
ENSRNOG00000052279	LOC103692169	92	88.073	ENSCSAG00000015617	MRPL53	84	92.553	Chlorocebus_sabaeus
ENSRNOG00000052279	LOC103692169	92	86.239	ENSCANG00000042942	MRPL53	84	92.553	Colobus_angolensis_palliatus
ENSRNOG00000052279	LOC103692169	100	85.714	ENSCGRG00001012557	Mrpl53	100	85.714	Cricetulus_griseus_chok1gshd
ENSRNOG00000052279	LOC103692169	100	85.714	ENSCGRG00000008972	Mrpl53	100	85.714	Cricetulus_griseus_crigri
ENSRNOG00000052279	LOC103692169	100	72.269	ENSDNOG00000046731	MRPL53	84	82.979	Dasypus_novemcinctus
ENSRNOG00000052279	LOC103692169	82	87.755	ENSETEG00000012580	MRPL53	83	89.362	Echinops_telfairi
ENSRNOG00000052279	LOC103692169	98	79.487	ENSEASG00005010610	MRPL53	100	79.487	Equus_asinus_asinus
ENSRNOG00000052279	LOC103692169	98	79.487	ENSECAG00000026983	MRPL53	100	79.487	Equus_caballus
ENSRNOG00000052279	LOC103692169	100	79.832	ENSFCAG00000036033	MRPL53	100	78.992	Felis_catus
ENSRNOG00000052279	LOC103692169	97	75.862	ENSFDAG00000010624	MRPL53	84	85.106	Fukomys_damarensis
ENSRNOG00000052279	LOC103692169	92	87.156	ENSGGOG00000006504	MRPL53	84	92.553	Gorilla_gorilla
ENSRNOG00000052279	LOC103692169	97	74.138	ENSHGLG00000009928	MRPL53	84	81.915	Heterocephalus_glaber_female
ENSRNOG00000052279	LOC103692169	97	74.138	ENSHGLG00100017366	MRPL53	84	81.915	Heterocephalus_glaber_male
ENSRNOG00000052279	LOC103692169	100	78.992	ENSSTOG00000001025	MRPL53	100	78.992	Ictidomys_tridecemlineatus
ENSRNOG00000052279	LOC103692169	91	82.407	ENSJJAG00000011605	Mrpl53	84	87.234	Jaculus_jaculus
ENSRNOG00000052279	LOC103692169	83	83.838	ENSLAFG00000007990	MRPL53	95	86.170	Loxodonta_africana
ENSRNOG00000052279	LOC103692169	92	87.156	ENSMFAG00000002637	MRPL53	84	91.489	Macaca_fascicularis
ENSRNOG00000052279	LOC103692169	92	87.156	ENSMNEG00000040378	MRPL53	84	91.489	Macaca_nemestrina
ENSRNOG00000052279	LOC103692169	92	86.239	ENSMLEG00000032167	MRPL53	84	90.426	Mandrillus_leucophaeus
ENSRNOG00000052279	LOC103692169	100	91.597	ENSMAUG00000010618	Mrpl53	100	91.597	Mesocricetus_auratus
ENSRNOG00000052279	LOC103692169	92	81.651	ENSMICG00000042776	MRPL53	84	87.234	Microcebus_murinus
ENSRNOG00000052279	LOC103692169	100	87.395	ENSMOCG00000015167	Mrpl53	100	87.395	Microtus_ochrogaster
ENSRNOG00000052279	LOC103692169	100	92.437	MGP_CAROLIEiJ_G0028544	Mrpl53	100	92.437	Mus_caroli
ENSRNOG00000052279	LOC103692169	100	95.798	ENSMUSG00000030037	Mrpl53	100	95.798	Mus_musculus
ENSRNOG00000052279	LOC103692169	100	96.639	MGP_PahariEiJ_G0022279	Mrpl53	100	96.639	Mus_pahari
ENSRNOG00000052279	LOC103692169	100	95.798	MGP_SPRETEiJ_G0029550	Mrpl53	100	95.798	Mus_spretus
ENSRNOG00000052279	LOC103692169	97	81.897	ENSMPUG00000008055	MRPL53	84	91.489	Mustela_putorius_furo
ENSRNOG00000052279	LOC103692169	91	80.556	ENSMLUG00000002655	MRPL53	84	87.097	Myotis_lucifugus
ENSRNOG00000052279	LOC103692169	100	84.034	ENSNGAG00000001052	Mrpl53	100	84.874	Nannospalax_galili
ENSRNOG00000052279	LOC103692169	92	86.239	ENSNLEG00000032770	MRPL53	84	91.489	Nomascus_leucogenys
ENSRNOG00000052279	LOC103692169	87	70.192	ENSMEUG00000008909	MRPL53	90	74.737	Notamacropus_eugenii
ENSRNOG00000052279	LOC103692169	92	81.818	ENSOCUG00000015342	MRPL53	83	89.362	Oryctolagus_cuniculus
ENSRNOG00000052279	LOC103692169	92	84.404	ENSOGAG00000001059	MRPL53	84	90.426	Otolemur_garnettii
ENSRNOG00000052279	LOC103692169	91	87.963	ENSOARG00000012700	MRPL53	84	92.553	Ovis_aries
ENSRNOG00000052279	LOC103692169	92	87.156	ENSPPAG00000029905	MRPL53	84	92.553	Pan_paniscus
ENSRNOG00000052279	LOC103692169	100	79.832	ENSPPRG00000008059	MRPL53	100	78.151	Panthera_pardus
ENSRNOG00000052279	LOC103692169	100	79.832	ENSPTIG00000011649	MRPL53	100	78.992	Panthera_tigris_altaica
ENSRNOG00000052279	LOC103692169	92	87.156	ENSPTRG00000044829	MRPL53	84	92.553	Pan_troglodytes
ENSRNOG00000052279	LOC103692169	92	87.156	ENSPANG00000032404	MRPL53	84	91.489	Papio_anubis
ENSRNOG00000052279	LOC103692169	100	90.083	ENSPEMG00000008725	Mrpl53	100	88.430	Peromyscus_maniculatus_bairdii
ENSRNOG00000052279	LOC103692169	97	76.724	ENSPCAG00000016829	MRPL53	84	86.170	Procavia_capensis
ENSRNOG00000052279	LOC103692169	92	80.734	ENSPCOG00000028676	MRPL53	84	87.234	Propithecus_coquereli
ENSRNOG00000052279	LOC103692169	91	83.333	ENSPVAG00000013958	MRPL53	84	89.362	Pteropus_vampyrus
ENSRNOG00000052279	LOC103692169	100	83.193	ENSRBIG00000013215	MRPL53	100	80.672	Rhinopithecus_bieti
ENSRNOG00000052279	LOC103692169	97	83.621	ENSRROG00000045669	MRPL53	84	91.489	Rhinopithecus_roxellana
ENSRNOG00000052279	LOC103692169	92	85.321	ENSSBOG00000026949	MRPL53	84	90.426	Saimiri_boliviensis_boliviensis
ENSRNOG00000052279	LOC103692169	87	68.269	ENSSHAG00000016957	MRPL53	89	73.684	Sarcophilus_harrisii
ENSRNOG00000052279	LOC103692169	97	83.621	ENSSARG00000010686	MRPL53	83	92.553	Sorex_araneus
ENSRNOG00000052279	LOC103692169	85	85.149	ENSTBEG00000017688	MRPL53	92	89.362	Tupaia_belangeri
ENSRNOG00000052279	LOC103692169	91	86.111	ENSTTRG00000012719	MRPL53	84	92.553	Tursiops_truncatus
ENSRNOG00000052279	LOC103692169	100	80.672	ENSUAMG00000021706	MRPL53	84	90.426	Ursus_americanus
ENSRNOG00000052279	LOC103692169	100	80.672	ENSUMAG00000001594	MRPL53	84	90.426	Ursus_maritimus
ENSRNOG00000052279	LOC103692169	97	81.897	ENSVVUG00000004459	MRPL53	99	81.034	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005840	ribosome	-	IEA	Component