EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000053060 (Gene tree)
Gene ID: 314836
Gene Symbol: Zfc3h1
Alias: LOC102550956|LOC314836|Psrc2|RGD1306287
Full Name: zinc finger%2C C3H1-type containing
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 57390 bases
Position: chr7:58366192-58423581
Accession: 1306287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073527	zf-C3H1	PF10650.9	1.9e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000081891	-	5544	XM_008765372	ENSRNOP00000073527	1848 (aa)	-	A0A0G2K5R4
ENSRNOT00000085829	-	645	-	ENSRNOP00000070719	214 (aa)	-	F1MAP0

Gene Model

Click here to download ENSRNOG00000053060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000053060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000053060	Zfc3h1	100	84.387	ENSG00000133858	ZFC3H1	98	87.826	Homo_sapiens
ENSRNOG00000053060	Zfc3h1	100	84.620	ENSAMEG00000000498	ZFC3H1	93	84.566	Ailuropoda_melanoleuca
ENSRNOG00000053060	Zfc3h1	99	40.822	ENSACIG00000015672	ZFC3H1	86	42.217	Amphilophus_citrinellus
ENSRNOG00000053060	Zfc3h1	99	44.692	ENSAOCG00000022567	ZFC3H1	83	43.906	Amphiprion_ocellaris
ENSRNOG00000053060	Zfc3h1	95	46.086	ENSATEG00000015391	ZFC3H1	83	45.732	Anabas_testudineus
ENSRNOG00000053060	Zfc3h1	89	64.458	ENSAPLG00000016116	ZFC3H1	92	64.152	Anas_platyrhynchos
ENSRNOG00000053060	Zfc3h1	99	61.612	ENSACAG00000007327	ZFC3H1	89	62.270	Anolis_carolinensis
ENSRNOG00000053060	Zfc3h1	100	83.955	ENSANAG00000038329	ZFC3H1	93	83.793	Aotus_nancymaae
ENSRNOG00000053060	Zfc3h1	96	44.211	ENSACLG00000021274	ZFC3H1	91	43.981	Astatotilapia_calliptera
ENSRNOG00000053060	Zfc3h1	93	41.802	ENSAMXG00000042831	-	91	42.437	Astyanax_mexicanus
ENSRNOG00000053060	Zfc3h1	100	84.333	ENSBTAG00000012267	ZFC3H1	93	84.441	Bos_taurus
ENSRNOG00000053060	Zfc3h1	100	84.009	ENSCJAG00000001384	ZFC3H1	93	83.955	Callithrix_jacchus
ENSRNOG00000053060	Zfc3h1	99	82.375	ENSCAFG00000000453	ZFC3H1	93	82.588	Canis_familiaris
ENSRNOG00000053060	Zfc3h1	99	82.592	ENSCAFG00020016502	ZFC3H1	99	82.632	Canis_lupus_dingo
ENSRNOG00000053060	Zfc3h1	100	84.657	ENSCHIG00000020097	ZFC3H1	93	84.657	Capra_hircus
ENSRNOG00000053060	Zfc3h1	100	82.947	ENSTSYG00000005471	ZFC3H1	93	82.947	Carlito_syrichta
ENSRNOG00000053060	Zfc3h1	100	78.029	ENSCPOG00000009504	ZFC3H1	92	77.831	Cavia_porcellus
ENSRNOG00000053060	Zfc3h1	100	83.901	ENSCCAG00000035967	ZFC3H1	93	83.847	Cebus_capucinus
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSCATG00000016321	ZFC3H1	93	84.171	Cercocebus_atys
ENSRNOG00000053060	Zfc3h1	100	84.125	ENSCLAG00000007646	ZFC3H1	93	84.071	Chinchilla_lanigera
ENSRNOG00000053060	Zfc3h1	100	84.063	ENSCSAG00000004100	ZFC3H1	93	84.009	Chlorocebus_sabaeus
ENSRNOG00000053060	Zfc3h1	99	66.006	ENSCPBG00000013449	ZFC3H1	87	66.755	Chrysemys_picta_bellii
ENSRNOG00000053060	Zfc3h1	100	84.279	ENSCANG00000030229	ZFC3H1	93	84.225	Colobus_angolensis_palliatus
ENSRNOG00000053060	Zfc3h1	100	83.603	ENSCGRG00001011660	Zfc3h1	92	83.711	Cricetulus_griseus_chok1gshd
ENSRNOG00000053060	Zfc3h1	89	86.922	ENSCGRG00000006894	Zfc3h1	92	86.800	Cricetulus_griseus_crigri
ENSRNOG00000053060	Zfc3h1	99	39.135	ENSCSEG00000021462	ZFC3H1	99	39.650	Cynoglossus_semilaevis
ENSRNOG00000053060	Zfc3h1	78	47.758	ENSCVAG00000019629	-	84	44.177	Cyprinodon_variegatus
ENSRNOG00000053060	Zfc3h1	100	83.955	ENSDNOG00000010314	ZFC3H1	93	83.739	Dasypus_novemcinctus
ENSRNOG00000053060	Zfc3h1	75	36.176	ENSEBUG00000003491	-	56	36.451	Eptatretus_burgeri
ENSRNOG00000053060	Zfc3h1	99	83.152	ENSEASG00005008229	ZFC3H1	93	82.982	Equus_asinus_asinus
ENSRNOG00000053060	Zfc3h1	99	83.261	ENSECAG00000026833	ZFC3H1	93	83.090	Equus_caballus
ENSRNOG00000053060	Zfc3h1	92	52.216	ENSELUG00000013421	-	78	46.896	Esox_lucius
ENSRNOG00000053060	Zfc3h1	100	84.765	ENSFCAG00000024198	ZFC3H1	93	84.711	Felis_catus
ENSRNOG00000053060	Zfc3h1	99	63.914	ENSFALG00000010320	ZFC3H1	92	63.802	Ficedula_albicollis
ENSRNOG00000053060	Zfc3h1	100	83.909	ENSFDAG00000017503	ZFC3H1	93	83.801	Fukomys_damarensis
ENSRNOG00000053060	Zfc3h1	89	47.170	ENSGMOG00000004527	-	74	45.601	Gadus_morhua
ENSRNOG00000053060	Zfc3h1	99	64.636	ENSGALG00000010177	ZFC3H1	89	65.900	Gallus_gallus
ENSRNOG00000053060	Zfc3h1	62	47.013	ENSGAFG00000013283	-	89	42.151	Gambusia_affinis
ENSRNOG00000053060	Zfc3h1	95	49.237	ENSGACG00000007651	ZFC3H1	89	43.062	Gasterosteus_aculeatus
ENSRNOG00000053060	Zfc3h1	99	65.519	ENSGAGG00000013798	ZFC3H1	92	66.863	Gopherus_agassizii
ENSRNOG00000053060	Zfc3h1	100	84.171	ENSGGOG00000025994	ZFC3H1	93	84.117	Gorilla_gorilla
ENSRNOG00000053060	Zfc3h1	100	83.918	ENSHGLG00000014297	ZFC3H1	93	83.810	Heterocephalus_glaber_female
ENSRNOG00000053060	Zfc3h1	100	83.756	ENSHGLG00100006263	ZFC3H1	93	83.648	Heterocephalus_glaber_male
ENSRNOG00000053060	Zfc3h1	69	41.942	ENSHCOG00000009144	-	67	48.485	Hippocampus_comes
ENSRNOG00000053060	Zfc3h1	100	85.467	ENSSTOG00000002650	ZFC3H1	93	85.359	Ictidomys_tridecemlineatus
ENSRNOG00000053060	Zfc3h1	95	48.733	ENSKMAG00000021476	-	85	43.970	Kryptolebias_marmoratus
ENSRNOG00000053060	Zfc3h1	85	49.032	ENSLBEG00000012352	-	86	47.483	Labrus_bergylta
ENSRNOG00000053060	Zfc3h1	94	55.017	ENSLACG00000002585	ZFC3H1	92	54.142	Latimeria_chalumnae
ENSRNOG00000053060	Zfc3h1	95	58.349	ENSLOCG00000016238	ZFC3H1	95	51.810	Lepisosteus_oculatus
ENSRNOG00000053060	Zfc3h1	99	82.649	ENSLAFG00000005820	ZFC3H1	93	83.351	Loxodonta_africana
ENSRNOG00000053060	Zfc3h1	100	84.333	ENSMFAG00000039403	ZFC3H1	93	84.279	Macaca_fascicularis
ENSRNOG00000053060	Zfc3h1	100	84.333	ENSMMUG00000020943	ZFC3H1	93	84.279	Macaca_mulatta
ENSRNOG00000053060	Zfc3h1	100	84.279	ENSMNEG00000008807	ZFC3H1	93	84.225	Macaca_nemestrina
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSMLEG00000029967	ZFC3H1	93	84.171	Mandrillus_leucophaeus
ENSRNOG00000053060	Zfc3h1	99	44.970	ENSMAMG00000021320	ZFC3H1	83	46.774	Mastacembelus_armatus
ENSRNOG00000053060	Zfc3h1	89	65.764	ENSMGAG00000010716	ZFC3H1	92	65.943	Meleagris_gallopavo
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSMICG00000009137	ZFC3H1	93	84.063	Microcebus_murinus
ENSRNOG00000053060	Zfc3h1	99	72.356	ENSMODG00000020408	ZFC3H1	93	72.359	Monodelphis_domestica
ENSRNOG00000053060	Zfc3h1	99	86.516	MGP_CAROLIEiJ_G0015814	Zfc3h1	93	87.076	Mus_caroli
ENSRNOG00000053060	Zfc3h1	99	87.351	ENSMUSG00000034163	Zfc3h1	93	87.459	Mus_musculus
ENSRNOG00000053060	Zfc3h1	100	85.261	MGP_PahariEiJ_G0031273	Zfc3h1	93	85.745	Mus_pahari
ENSRNOG00000053060	Zfc3h1	99	87.622	MGP_SPRETEiJ_G0016636	Zfc3h1	93	87.622	Mus_spretus
ENSRNOG00000053060	Zfc3h1	100	84.819	ENSMPUG00000017488	ZFC3H1	93	84.765	Mustela_putorius_furo
ENSRNOG00000053060	Zfc3h1	100	81.274	ENSMLUG00000011723	ZFC3H1	93	80.562	Myotis_lucifugus
ENSRNOG00000053060	Zfc3h1	100	84.649	ENSNGAG00000017623	Zfc3h1	93	84.162	Nannospalax_galili
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSNLEG00000004372	ZFC3H1	93	84.171	Nomascus_leucogenys
ENSRNOG00000053060	Zfc3h1	72	89.286	ENSOPRG00000008075	ZFC3H1	67	88.571	Ochotona_princeps
ENSRNOG00000053060	Zfc3h1	52	48.084	ENSONIG00000018271	ZFC3H1	99	41.574	Oreochromis_niloticus
ENSRNOG00000053060	Zfc3h1	100	84.171	ENSOCUG00000004591	ZFC3H1	93	84.279	Oryctolagus_cuniculus
ENSRNOG00000053060	Zfc3h1	94	42.230	ENSORLG00000000155	-	79	43.609	Oryzias_latipes
ENSRNOG00000053060	Zfc3h1	94	42.077	ENSORLG00015020699	-	85	43.541	Oryzias_latipes_hsok
ENSRNOG00000053060	Zfc3h1	90	80.645	ENSOMEG00000015403	-	76	43.422	Oryzias_melastigma
ENSRNOG00000053060	Zfc3h1	100	83.387	ENSOGAG00000033606	ZFC3H1	93	83.216	Otolemur_garnettii
ENSRNOG00000053060	Zfc3h1	100	84.333	ENSOARG00000014589	ZFC3H1	93	84.009	Ovis_aries
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSPPAG00000029409	ZFC3H1	93	84.171	Pan_paniscus
ENSRNOG00000053060	Zfc3h1	100	84.711	ENSPPRG00000010196	ZFC3H1	93	84.657	Panthera_pardus
ENSRNOG00000053060	Zfc3h1	100	84.711	ENSPTIG00000006898	ZFC3H1	93	84.657	Panthera_tigris_altaica
ENSRNOG00000053060	Zfc3h1	100	84.279	ENSPTRG00000005224	ZFC3H1	93	84.225	Pan_troglodytes
ENSRNOG00000053060	Zfc3h1	100	82.496	ENSPANG00000009558	ZFC3H1	93	82.442	Papio_anubis
ENSRNOG00000053060	Zfc3h1	95	77.419	ENSPKIG00000023219	ZFC3H1	92	45.637	Paramormyrops_kingsleyae
ENSRNOG00000053060	Zfc3h1	99	65.913	ENSPSIG00000012997	ZFC3H1	90	68.602	Pelodiscus_sinensis
ENSRNOG00000053060	Zfc3h1	51	45.642	ENSPMGG00000007504	ZFC3H1	86	42.308	Periophthalmus_magnuspinnatus
ENSRNOG00000053060	Zfc3h1	99	72.136	ENSPCIG00000025066	ZFC3H1	93	72.674	Phascolarctos_cinereus
ENSRNOG00000053060	Zfc3h1	81	52.841	ENSPFOG00000001903	-	85	42.497	Poecilia_formosa
ENSRNOG00000053060	Zfc3h1	73	52.646	ENSPLAG00000015995	-	91	44.102	Poecilia_latipinna
ENSRNOG00000053060	Zfc3h1	84	44.701	ENSPMEG00000007517	-	85	40.206	Poecilia_mexicana
ENSRNOG00000053060	Zfc3h1	82	48.039	ENSPREG00000016974	ZFC3H1	85	42.944	Poecilia_reticulata
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSPPYG00000004773	ZFC3H1	93	84.171	Pongo_abelii
ENSRNOG00000053060	Zfc3h1	86	81.373	ENSPCAG00000003723	ZFC3H1	79	81.373	Procavia_capensis
ENSRNOG00000053060	Zfc3h1	100	84.009	ENSPCOG00000019879	ZFC3H1	93	83.955	Propithecus_coquereli
ENSRNOG00000053060	Zfc3h1	96	88.805	ENSPVAG00000012354	ZFC3H1	89	88.805	Pteropus_vampyrus
ENSRNOG00000053060	Zfc3h1	96	44.753	ENSPNYG00000005977	ZFC3H1	85	44.830	Pundamilia_nyererei
ENSRNOG00000053060	Zfc3h1	62	46.202	ENSPNAG00000017704	-	88	40.420	Pygocentrus_nattereri
ENSRNOG00000053060	Zfc3h1	100	81.361	ENSRBIG00000028462	ZFC3H1	93	81.024	Rhinopithecus_bieti
ENSRNOG00000053060	Zfc3h1	100	84.225	ENSRROG00000040039	ZFC3H1	93	84.171	Rhinopithecus_roxellana
ENSRNOG00000053060	Zfc3h1	100	82.820	ENSSBOG00000032676	ZFC3H1	93	82.604	Saimiri_boliviensis_boliviensis
ENSRNOG00000053060	Zfc3h1	100	70.598	ENSSHAG00000002431	ZFC3H1	92	70.636	Sarcophilus_harrisii
ENSRNOG00000053060	Zfc3h1	87	52.794	ENSSFOG00015018112	ZFC3H1	90	47.478	Scleropages_formosus
ENSRNOG00000053060	Zfc3h1	78	44.963	ENSSMAG00000019783	ZFC3H1	84	44.122	Scophthalmus_maximus
ENSRNOG00000053060	Zfc3h1	95	45.121	ENSSDUG00000000244	ZFC3H1	83	45.705	Seriola_dumerili
ENSRNOG00000053060	Zfc3h1	92	43.781	ENSSLDG00000018408	ZFC3H1	88	46.591	Seriola_lalandi_dorsalis
ENSRNOG00000053060	Zfc3h1	84	86.217	ENSSARG00000008639	ZFC3H1	85	83.410	Sorex_araneus
ENSRNOG00000053060	Zfc3h1	87	41.801	ENSSPAG00000001916	-	84	44.315	Stegastes_partitus
ENSRNOG00000053060	Zfc3h1	96	88.845	ENSSSCG00000000509	ZFC3H1	100	83.677	Sus_scrofa
ENSRNOG00000053060	Zfc3h1	99	64.159	ENSTGUG00000007206	ZFC3H1	93	64.002	Taeniopygia_guttata
ENSRNOG00000053060	Zfc3h1	64	44.162	ENSTRUG00000004528	-	88	43.910	Takifugu_rubripes
ENSRNOG00000053060	Zfc3h1	86	81.250	ENSTBEG00000016441	ZFC3H1	80	81.250	Tupaia_belangeri
ENSRNOG00000053060	Zfc3h1	100	82.388	ENSTTRG00000007328	ZFC3H1	93	82.388	Tursiops_truncatus
ENSRNOG00000053060	Zfc3h1	100	84.927	ENSUAMG00000001880	ZFC3H1	93	84.873	Ursus_americanus
ENSRNOG00000053060	Zfc3h1	100	84.063	ENSUMAG00000021131	ZFC3H1	92	84.009	Ursus_maritimus
ENSRNOG00000053060	Zfc3h1	89	84.335	ENSVVUG00000008655	ZFC3H1	92	84.335	Vulpes_vulpes
ENSRNOG00000053060	Zfc3h1	94	52.596	ENSXETG00000033302	ZFC3H1	92	52.771	Xenopus_tropicalis
ENSRNOG00000053060	Zfc3h1	87	48.727	ENSXMAG00000006933	-	85	42.695	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000178	exosome (RNase complex)	-	IEA	Component
GO:0000178	exosome (RNase complex)	-	ISO	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component