EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000053234 (Gene tree)
Gene ID
308311
Gene Symbol
Cnot3
Alias
LOC308311
Full Name
CCR4-NOT transcription complex%2C subunit 3
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
16344 bases
Position
chr1:64130908-64147251
Accession
1304771
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000075261Not3PF04065.153.1e-9511
ENSRNOP00000075261NOT2_3_5PF04153.185.4e-4111
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000088502-2969-ENSRNOP00000075261751 (aa)-D3ZUV9
Gene Model
Click here to download ENSRNOG00000053234's gene model file
Pathways
Pathway IDPathway NameSource
rno03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000053234's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000053234Cnot310095.086ENSG00000088038CNOT3100100.000Homo_sapiens
ENSRNOG00000053234Cnot36982.079ENSAPOG00000015499CNOT39882.079Acanthochromis_polyacanthus
ENSRNOG00000053234Cnot310093.342ENSAMEG00000004528CNOT310093.742Ailuropoda_melanoleuca
ENSRNOG00000053234Cnot37589.474ENSACIG00000006635cnot3a9993.590Amphilophus_citrinellus
ENSRNOG00000053234Cnot35990.179ENSACIG00000003652cnot3b7689.427Amphilophus_citrinellus
ENSRNOG00000053234Cnot38390.461ENSAOCG00000023769cnot3a6790.164Amphiprion_ocellaris
ENSRNOG00000053234Cnot36687.215ENSAOCG00000018385-7877.652Amphiprion_ocellaris
ENSRNOG00000053234Cnot37091.204ENSAPEG00000002640cnot3b7591.204Amphiprion_percula
ENSRNOG00000053234Cnot38590.461ENSAPEG00000006624cnot3a6890.164Amphiprion_percula
ENSRNOG00000053234Cnot37392.131ENSATEG00000015777cnot3b6692.434Anabas_testudineus
ENSRNOG00000053234Cnot38590.461ENSATEG00000022737cnot3a6390.945Anabas_testudineus
ENSRNOG00000053234Cnot310080.291ENSACAG00000016085CNOT310080.795Anolis_carolinensis
ENSRNOG00000053234Cnot310094.960ENSANAG00000025756CNOT310095.093Aotus_nancymaae
ENSRNOG00000053234Cnot38592.787ENSACLG00000016702cnot3b8172.811Astatotilapia_calliptera
ENSRNOG00000053234Cnot38590.461ENSACLG00000021136cnot3a6690.288Astatotilapia_calliptera
ENSRNOG00000053234Cnot37589.508ENSAMXG00000012359cnot3a7675.318Astyanax_mexicanus
ENSRNOG00000053234Cnot38590.820ENSAMXG00000009447cnot3b10058.801Astyanax_mexicanus
ENSRNOG00000053234Cnot310091.877ENSBTAG00000014900CNOT310092.543Bos_taurus
ENSRNOG00000053234Cnot35859.627WBGene00003826ntl-38259.259Caenorhabditis_elegans
ENSRNOG00000053234Cnot310094.960ENSCJAG00000001094CNOT310095.093Callithrix_jacchus
ENSRNOG00000053234Cnot310094.954ENSCAFG00000002699CNOT310094.954Canis_familiaris
ENSRNOG00000053234Cnot310094.954ENSCAFG00020018359CNOT310094.954Canis_lupus_dingo
ENSRNOG00000053234Cnot39989.733ENSCHIG00000015302CNOT39989.867Capra_hircus
ENSRNOG00000053234Cnot310094.008ENSTSYG00000008058CNOT310093.742Carlito_syrichta
ENSRNOG00000053234Cnot310093.742ENSCAPG00000009533CNOT310093.742Cavia_aperea
ENSRNOG00000053234Cnot310094.940ENSCPOG00000020741CNOT310094.940Cavia_porcellus
ENSRNOG00000053234Cnot310095.093ENSCCAG00000036290CNOT310095.225Cebus_capucinus
ENSRNOG00000053234Cnot310095.473ENSCATG00000030324CNOT310095.473Cercocebus_atys
ENSRNOG00000053234Cnot310093.742ENSCLAG00000003302CNOT310093.609Chinchilla_lanigera
ENSRNOG00000053234Cnot310095.340ENSCSAG00000001900CNOT310095.340Chlorocebus_sabaeus
ENSRNOG00000053234Cnot310081.325ENSCPBG00000011655CNOT310081.457Chrysemys_picta_bellii
ENSRNOG00000053234Cnot310095.473ENSCANG00000013408CNOT310095.473Colobus_angolensis_palliatus
ENSRNOG00000053234Cnot310097.872ENSCGRG00001000855Cnot310097.872Cricetulus_griseus_chok1gshd
ENSRNOG00000053234Cnot36277.099ENSCGRG00000012929Cnot37577.099Cricetulus_griseus_crigri
ENSRNOG00000053234Cnot310080.656ENSCSEG00000016892cnot3b10062.434Cynoglossus_semilaevis
ENSRNOG00000053234Cnot38589.180ENSCSEG00000003574cnot3a6889.180Cynoglossus_semilaevis
ENSRNOG00000053234Cnot37390.492ENSCVAG00000022122cnot3b7075.665Cyprinodon_variegatus
ENSRNOG00000053234Cnot39189.836ENSCVAG00000008168cnot3a6988.424Cyprinodon_variegatus
ENSRNOG00000053234Cnot38888.562ENSDARG00000019842cnot3b7788.562Danio_rerio
ENSRNOG00000053234Cnot38589.836ENSDARG00000007135cnot3a7380.737Danio_rerio
ENSRNOG00000053234Cnot310094.541ENSDNOG00000045972CNOT310094.541Dasypus_novemcinctus
ENSRNOG00000053234Cnot310094.407ENSDORG00000008021Cnot310094.407Dipodomys_ordii
ENSRNOG00000053234Cnot35969.512FBgn0033029Not35068.263Drosophila_melanogaster
ENSRNOG00000053234Cnot372100.000ENSETEG00000006305CNOT371100.000Echinops_telfairi
ENSRNOG00000053234Cnot310057.433ENSEBUG00000010437cnot3a10056.242Eptatretus_burgeri
ENSRNOG00000053234Cnot310094.828ENSEASG00005021591CNOT310094.828Equus_asinus_asinus
ENSRNOG00000053234Cnot310094.828ENSECAG00000023181CNOT310094.828Equus_caballus
ENSRNOG00000053234Cnot38581.212ENSELUG00000014743cnot3a7080.303Esox_lucius
ENSRNOG00000053234Cnot38589.216ENSELUG00000000953cnot3b7188.852Esox_lucius
ENSRNOG00000053234Cnot310093.742ENSFCAG00000014042CNOT310094.141Felis_catus
ENSRNOG00000053234Cnot37590.164ENSFHEG00000001696cnot3b7474.936Fundulus_heteroclitus
ENSRNOG00000053234Cnot37588.197ENSFHEG00000023166cnot3a10072.453Fundulus_heteroclitus
ENSRNOG00000053234Cnot38084.365ENSGMOG00000005365cnot3a6584.365Gadus_morhua
ENSRNOG00000053234Cnot37589.508ENSGAFG00000013094cnot3a6888.103Gambusia_affinis
ENSRNOG00000053234Cnot38588.852ENSGAFG00000003459cnot3b7574.680Gambusia_affinis
ENSRNOG00000053234Cnot35881.955ENSGACG00000009395cnot3b5386.207Gasterosteus_aculeatus
ENSRNOG00000053234Cnot37784.314ENSGACG00000011489cnot3a6484.314Gasterosteus_aculeatus
ENSRNOG00000053234Cnot39977.955ENSGAGG00000012677CNOT310079.460Gopherus_agassizii
ENSRNOG00000053234Cnot310095.086ENSGGOG00000012996CNOT310095.219Gorilla_gorilla
ENSRNOG00000053234Cnot36984.793ENSHBUG00000019699cnot3b7283.333Haplochromis_burtoni
ENSRNOG00000053234Cnot38590.461ENSHBUG00000005275cnot3a6690.288Haplochromis_burtoni
ENSRNOG00000053234Cnot310093.742ENSHGLG00000008821CNOT310093.875Heterocephalus_glaber_female
ENSRNOG00000053234Cnot310070.663ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSRNOG00000053234Cnot38589.474ENSHCOG00000020968cnot3a8089.180Hippocampus_comes
ENSRNOG00000053234Cnot39982.450ENSIPUG00000000167cnot37184.516Ictalurus_punctatus
ENSRNOG00000053234Cnot39391.039ENSIPUG00000009046cnot3b8277.907Ictalurus_punctatus
ENSRNOG00000053234Cnot310096.272ENSSTOG00000028248CNOT310096.272Ictidomys_tridecemlineatus
ENSRNOG00000053234Cnot310095.739ENSJJAG00000014594Cnot310095.606Jaculus_jaculus
ENSRNOG00000053234Cnot38590.164ENSKMAG00000004863cnot3a6990.361Kryptolebias_marmoratus
ENSRNOG00000053234Cnot37392.131ENSKMAG00000018723cnot3b8073.522Kryptolebias_marmoratus
ENSRNOG00000053234Cnot38790.820ENSLBEG00000018278cnot3b7190.132Labrus_bergylta
ENSRNOG00000053234Cnot310075.785ENSLACG00000009742CNOT310076.440Latimeria_chalumnae
ENSRNOG00000053234Cnot36594.754ENSLOCG00000000005cnot3b8990.588Lepisosteus_oculatus
ENSRNOG00000053234Cnot310088.742ENSLAFG00000022133CNOT310088.742Loxodonta_africana
ENSRNOG00000053234Cnot310095.606ENSMFAG00000040073CNOT310095.606Macaca_fascicularis
ENSRNOG00000053234Cnot310087.350ENSMMUG00000009698CNOT3100100.000Macaca_mulatta
ENSRNOG00000053234Cnot310095.073ENSMNEG00000036750CNOT310095.073Macaca_nemestrina
ENSRNOG00000053234Cnot310090.596ENSMLEG00000036579CNOT310090.596Mandrillus_leucophaeus
ENSRNOG00000053234Cnot37391.803ENSMAMG00000019357cnot3b6592.105Mastacembelus_armatus
ENSRNOG00000053234Cnot38590.789ENSMAMG00000019397cnot3a6890.492Mastacembelus_armatus
ENSRNOG00000053234Cnot38592.787ENSMZEG00005002466cnot3b8172.811Maylandia_zebra
ENSRNOG00000053234Cnot38590.461ENSMZEG00005016304cnot3a6690.288Maylandia_zebra
ENSRNOG00000053234Cnot310098.003ENSMAUG00000014996Cnot310098.003Mesocricetus_auratus
ENSRNOG00000053234Cnot310094.164ENSMICG00000002370CNOT310094.297Microcebus_murinus
ENSRNOG00000053234Cnot372100.000ENSMOCG00000013249Cnot3100100.000Microtus_ochrogaster
ENSRNOG00000053234Cnot37589.316ENSMMOG00000016446cnot3a6785.246Mola_mola
ENSRNOG00000053234Cnot36188.333ENSMMOG00000013086cnot3b7388.333Mola_mola
ENSRNOG00000053234Cnot310085.126ENSMODG00000004066CNOT310086.056Monodelphis_domestica
ENSRNOG00000053234Cnot39965.269ENSMALG00000004936cnot3b10065.550Monopterus_albus
ENSRNOG00000053234Cnot38589.180ENSMALG00000009204cnot3a7773.815Monopterus_albus
ENSRNOG00000053234Cnot310099.467MGP_CAROLIEiJ_G0029095Cnot3100100.000Mus_caroli
ENSRNOG00000053234Cnot310099.334ENSMUSG00000035632Cnot3100100.000Mus_musculus
ENSRNOG00000053234Cnot310099.467MGP_PahariEiJ_G0020964Cnot3100100.000Mus_pahari
ENSRNOG00000053234Cnot310099.334MGP_SPRETEiJ_G0030148Cnot3100100.000Mus_spretus
ENSRNOG00000053234Cnot310094.282ENSMPUG00000010352CNOT310093.883Mustela_putorius_furo
ENSRNOG00000053234Cnot310096.405ENSNGAG00000013266Cnot310096.405Nannospalax_galili
ENSRNOG00000053234Cnot39965.410ENSNBRG00000003336cnot3b8588.053Neolamprologus_brichardi
ENSRNOG00000053234Cnot37890.551ENSNBRG00000002401cnot3a6390.551Neolamprologus_brichardi
ENSRNOG00000053234Cnot310088.801ENSNLEG00000006272CNOT310088.933Nomascus_leucogenys
ENSRNOG00000053234Cnot378100.000ENSMEUG00000002952CNOT378100.000Notamacropus_eugenii
ENSRNOG00000053234Cnot362100.000ENSOPRG00000001605-66100.000Ochotona_princeps
ENSRNOG00000053234Cnot310093.742ENSODEG00000000705CNOT310093.609Octodon_degus
ENSRNOG00000053234Cnot37392.459ENSONIG00000007047cnot3b8172.979Oreochromis_niloticus
ENSRNOG00000053234Cnot38590.461ENSONIG00000006568cnot3a8174.813Oreochromis_niloticus
ENSRNOG00000053234Cnot310094.541ENSOCUG00000007691CNOT310094.674Oryctolagus_cuniculus
ENSRNOG00000053234Cnot37292.131ENSORLG00000005982cnot3b7384.840Oryzias_latipes
ENSRNOG00000053234Cnot38590.164ENSORLG00000011174cnot3a7289.899Oryzias_latipes
ENSRNOG00000053234Cnot38589.836ENSORLG00020008009cnot3a7889.836Oryzias_latipes_hni
ENSRNOG00000053234Cnot37292.131ENSORLG00020005779cnot3b7184.548Oryzias_latipes_hni
ENSRNOG00000053234Cnot38589.836ENSORLG00015013729cnot3a6889.836Oryzias_latipes_hsok
ENSRNOG00000053234Cnot37292.131ENSORLG00015019021cnot3b7184.548Oryzias_latipes_hsok
ENSRNOG00000053234Cnot38590.164ENSOMEG00000010309cnot3a10065.445Oryzias_melastigma
ENSRNOG00000053234Cnot39484.950ENSOMEG00000015557cnot3b7283.382Oryzias_melastigma
ENSRNOG00000053234Cnot310094.422ENSOGAG00000006945CNOT310094.555Otolemur_garnettii
ENSRNOG00000053234Cnot38669.565ENSOARG00000002981CNOT39569.565Ovis_aries
ENSRNOG00000053234Cnot310095.086ENSPPAG00000002748CNOT310095.219Pan_paniscus
ENSRNOG00000053234Cnot310093.742ENSPPRG00000011705CNOT310094.141Panthera_pardus
ENSRNOG00000053234Cnot37799.664ENSPTIG00000008781CNOT310095.775Panthera_tigris_altaica
ENSRNOG00000053234Cnot310095.086ENSPTRG00000046717-10095.219Pan_troglodytes
ENSRNOG00000053234Cnot310095.086ENSPTRG00000011444CNOT310095.219Pan_troglodytes
ENSRNOG00000053234Cnot310095.473ENSPANG00000009375CNOT310095.473Papio_anubis
ENSRNOG00000053234Cnot38493.750ENSPKIG00000015967-9995.299Paramormyrops_kingsleyae
ENSRNOG00000053234Cnot38891.803ENSPKIG00000011733CNOT37579.837Paramormyrops_kingsleyae
ENSRNOG00000053234Cnot37083.158ENSPMGG00000022539cnot3b8380.268Periophthalmus_magnuspinnatus
ENSRNOG00000053234Cnot310098.005ENSPEMG00000024185Cnot310098.005Peromyscus_maniculatus_bairdii
ENSRNOG00000053234Cnot310086.285ENSPCIG00000023018CNOT39398.925Phascolarctos_cinereus
ENSRNOG00000053234Cnot38589.508ENSPFOG00000007168cnot3b7574.425Poecilia_formosa
ENSRNOG00000053234Cnot39389.508ENSPFOG00000008693cnot3a10067.318Poecilia_formosa
ENSRNOG00000053234Cnot39583.934ENSPLAG00000013457cnot3b7574.425Poecilia_latipinna
ENSRNOG00000053234Cnot39389.508ENSPLAG00000013324cnot3a6888.103Poecilia_latipinna
ENSRNOG00000053234Cnot39583.934ENSPMEG00000010184cnot3b7574.425Poecilia_mexicana
ENSRNOG00000053234Cnot39389.508ENSPMEG00000017718cnot3a6888.103Poecilia_mexicana
ENSRNOG00000053234Cnot38378.082ENSPREG00000000662cnot3b6578.351Poecilia_reticulata
ENSRNOG00000053234Cnot38888.562ENSPREG00000007592cnot3a8686.770Poecilia_reticulata
ENSRNOG00000053234Cnot310095.086ENSPPYG00000010372CNOT310095.219Pongo_abelii
ENSRNOG00000053234Cnot37798.305ENSPCAG00000011999CNOT37798.305Procavia_capensis
ENSRNOG00000053234Cnot310093.899ENSPCOG00000017673CNOT310094.032Propithecus_coquereli
ENSRNOG00000053234Cnot310090.160ENSPVAG00000015564CNOT310090.691Pteropus_vampyrus
ENSRNOG00000053234Cnot36986.139ENSPNYG00000003358cnot3b7274.074Pundamilia_nyererei
ENSRNOG00000053234Cnot38590.461ENSPNYG00000002282cnot3a6690.288Pundamilia_nyererei
ENSRNOG00000053234Cnot39190.323ENSPNAG00000027459cnot3b8171.529Pygocentrus_nattereri
ENSRNOG00000053234Cnot37589.180ENSPNAG00000017679cnot3a8474.873Pygocentrus_nattereri
ENSRNOG00000053234Cnot310095.340ENSRBIG00000031025CNOT310095.340Rhinopithecus_bieti
ENSRNOG00000053234Cnot310095.206ENSRROG00000003872CNOT310095.206Rhinopithecus_roxellana
ENSRNOG00000053234Cnot310094.960ENSSBOG00000030268CNOT310095.093Saimiri_boliviensis_boliviensis
ENSRNOG00000053234Cnot310091.803ENSSFOG00015019203-6892.105Scleropages_formosus
ENSRNOG00000053234Cnot38591.803ENSSFOG00015000248cnot37690.354Scleropages_formosus
ENSRNOG00000053234Cnot38590.132ENSSMAG00000013235cnot3a6789.836Scophthalmus_maximus
ENSRNOG00000053234Cnot37392.787ENSSDUG00000003428cnot3b7180.381Seriola_dumerili
ENSRNOG00000053234Cnot37589.542ENSSDUG00000008181cnot3a10085.932Seriola_dumerili
ENSRNOG00000053234Cnot38090.789ENSSLDG00000014733cnot3a6490.647Seriola_lalandi_dorsalis
ENSRNOG00000053234Cnot37392.787ENSSLDG00000014376cnot3b6593.092Seriola_lalandi_dorsalis
ENSRNOG00000053234Cnot310081.085ENSSPUG00000008510CNOT310081.698Sphenodon_punctatus
ENSRNOG00000053234Cnot38090.132ENSSPAG00000003858cnot3a6589.836Stegastes_partitus
ENSRNOG00000053234Cnot37391.803ENSSPAG00000001429cnot3b6692.105Stegastes_partitus
ENSRNOG00000053234Cnot310094.297ENSSSCG00000003264CNOT310094.297Sus_scrofa
ENSRNOG00000053234Cnot38590.789ENSTRUG00000015732cnot3a6890.492Takifugu_rubripes
ENSRNOG00000053234Cnot37391.803ENSTRUG00000007248cnot3b5992.169Takifugu_rubripes
ENSRNOG00000053234Cnot37790.940ENSTNIG00000008082cnot3a6590.940Tetraodon_nigroviridis
ENSRNOG00000053234Cnot36692.105ENSTNIG00000005663cnot3b7879.521Tetraodon_nigroviridis
ENSRNOG00000053234Cnot350100.000ENSTBEG00000009620-54100.000Tupaia_belangeri
ENSRNOG00000053234Cnot36099.351ENSTTRG00000006567CNOT37799.351Tursiops_truncatus
ENSRNOG00000053234Cnot310093.875ENSUAMG00000005234CNOT310094.008Ursus_americanus
ENSRNOG00000053234Cnot38297.987ENSUMAG00000010934CNOT39598.319Ursus_maritimus
ENSRNOG00000053234Cnot39994.947ENSVVUG00000008239CNOT39994.730Vulpes_vulpes
ENSRNOG00000053234Cnot38997.727ENSXETG00000003166cnot310078.215Xenopus_tropicalis
ENSRNOG00000053234Cnot37489.370ENSXCOG00000018976cnot3b6588.889Xiphophorus_couchianus
ENSRNOG00000053234Cnot37587.582ENSXCOG00000019460cnot3a7686.218Xiphophorus_couchianus
ENSRNOG00000053234Cnot38589.508ENSXMAG00000014176cnot3b7974.680Xiphophorus_maculatus
ENSRNOG00000053234Cnot37589.508ENSXMAG00000012273cnot3a6988.103Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000932P-body21873635.IBAComponent
GO:0000932P-body-ISOComponent
GO:0001829trophectodermal cell differentiation-IEAProcess
GO:0001829trophectodermal cell differentiation-ISOProcess
GO:0003674molecular_function-NDFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus-IEAComponent
GO:0006355regulation of transcription, DNA-templated-IEAProcess
GO:0008150biological_process-NDProcess
GO:0017148negative regulation of translation21873635.IBAProcess
GO:0030014CCR4-NOT complex-ISOComponent
GO:0030015CCR4-NOT core complex21873635.IBAComponent
GO:0120162positive regulation of cold-induced thermogenesis-ISOProcess
GO:0120162positive regulation of cold-induced thermogenesis28032897.ISSProcess
GO:2000036regulation of stem cell population maintenance21873635.IBAProcess
GO:2000036regulation of stem cell population maintenance-ISOProcess

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