EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000053574 (Gene tree)
Gene ID: -
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 51114 bases
Position: chr19:59333184-59384297
Accession: 679346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070582	SpoU_methylase	PF00588.19	3.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000077516	AABR07044138.2-201	4728	XM_008772682	ENSRNOP00000070582	1575 (aa)	-	A0A0G2JYA7

Gene Model

Click here to download ENSRNOG00000053574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000053574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000053574	Tarbp1	99	68.646	ENSG00000059588	TARBP1	99	68.955	Homo_sapiens
ENSRNOG00000053574	Tarbp1	99	40.303	ENSAPOG00000016419	si:dkey-85a20.4	99	40.303	Acanthochromis_polyacanthus
ENSRNOG00000053574	Tarbp1	86	71.418	ENSAMEG00000003359	TARBP1	99	71.418	Ailuropoda_melanoleuca
ENSRNOG00000053574	Tarbp1	95	40.990	ENSATEG00000020266	si:dkey-85a20.4	99	39.952	Anabas_testudineus
ENSRNOG00000053574	Tarbp1	85	58.656	ENSAPLG00000007666	TARBP1	99	59.437	Anas_platyrhynchos
ENSRNOG00000053574	Tarbp1	98	51.707	ENSACAG00000001142	TARBP1	98	51.707	Anolis_carolinensis
ENSRNOG00000053574	Tarbp1	87	68.660	ENSANAG00000022031	TARBP1	99	64.768	Aotus_nancymaae
ENSRNOG00000053574	Tarbp1	93	74.606	ENSBTAG00000004517	TARBP1	99	74.606	Bos_taurus
ENSRNOG00000053574	Tarbp1	99	68.067	ENSCJAG00000018155	TARBP1	99	68.190	Callithrix_jacchus
ENSRNOG00000053574	Tarbp1	90	69.468	ENSCAFG00000011533	TARBP1	99	69.908	Canis_familiaris
ENSRNOG00000053574	Tarbp1	99	67.471	ENSCAFG00020027141	TARBP1	99	68.151	Canis_lupus_dingo
ENSRNOG00000053574	Tarbp1	99	67.138	ENSCHIG00000011437	TARBP1	99	67.734	Capra_hircus
ENSRNOG00000053574	Tarbp1	82	70.782	ENSTSYG00000010382	TARBP1	96	70.782	Carlito_syrichta
ENSRNOG00000053574	Tarbp1	81	64.808	ENSCAPG00000010831	TARBP1	99	64.965	Cavia_aperea
ENSRNOG00000053574	Tarbp1	99	68.903	ENSCPOG00000013995	TARBP1	99	69.969	Cavia_porcellus
ENSRNOG00000053574	Tarbp1	99	68.314	ENSCCAG00000037278	TARBP1	99	69.347	Cebus_capucinus
ENSRNOG00000053574	Tarbp1	99	67.961	ENSCATG00000011754	TARBP1	100	68.453	Cercocebus_atys
ENSRNOG00000053574	Tarbp1	83	72.324	ENSCLAG00000003655	TARBP1	96	72.477	Chinchilla_lanigera
ENSRNOG00000053574	Tarbp1	81	71.094	ENSCSAG00000010100	TARBP1	99	71.094	Chlorocebus_sabaeus
ENSRNOG00000053574	Tarbp1	94	57.773	ENSCPBG00000005587	TARBP1	98	57.971	Chrysemys_picta_bellii
ENSRNOG00000053574	Tarbp1	86	71.439	ENSCANG00000034343	TARBP1	99	71.439	Colobus_angolensis_palliatus
ENSRNOG00000053574	Tarbp1	99	83.830	ENSCGRG00001016690	Tarbp1	99	83.830	Cricetulus_griseus_chok1gshd
ENSRNOG00000053574	Tarbp1	99	83.044	ENSCGRG00000016893	Tarbp1	100	83.044	Cricetulus_griseus_crigri
ENSRNOG00000053574	Tarbp1	99	38.367	ENSCSEG00000005255	si:dkey-85a20.4	93	45.430	Cynoglossus_semilaevis
ENSRNOG00000053574	Tarbp1	89	43.627	ENSDARG00000079055	si:dkey-85a20.4	99	51.375	Danio_rerio
ENSRNOG00000053574	Tarbp1	99	65.170	ENSDNOG00000008637	TARBP1	99	66.019	Dasypus_novemcinctus
ENSRNOG00000053574	Tarbp1	82	70.093	ENSDORG00000007984	Tarbp1	100	70.093	Dipodomys_ordii
ENSRNOG00000053574	Tarbp1	99	69.720	ENSEASG00005000252	TARBP1	99	70.031	Equus_asinus_asinus
ENSRNOG00000053574	Tarbp1	99	69.487	ENSECAG00000023673	TARBP1	99	69.697	Equus_caballus
ENSRNOG00000053574	Tarbp1	99	39.314	ENSELUG00000012193	si:dkey-85a20.4	99	39.327	Esox_lucius
ENSRNOG00000053574	Tarbp1	99	65.884	ENSFCAG00000014183	TARBP1	99	66.378	Felis_catus
ENSRNOG00000053574	Tarbp1	82	59.648	ENSFALG00000013565	TARBP1	99	59.618	Ficedula_albicollis
ENSRNOG00000053574	Tarbp1	81	69.008	ENSFDAG00000001308	TARBP1	99	69.160	Fukomys_damarensis
ENSRNOG00000053574	Tarbp1	99	36.620	ENSFHEG00000007565	si:dkey-85a20.4	95	53.994	Fundulus_heteroclitus
ENSRNOG00000053574	Tarbp1	86	42.211	ENSGMOG00000004549	si:dkey-85a20.4	99	42.283	Gadus_morhua
ENSRNOG00000053574	Tarbp1	99	52.378	ENSGALG00000011000	TARBP1	99	53.188	Gallus_gallus
ENSRNOG00000053574	Tarbp1	95	40.853	ENSGAFG00000007387	si:dkey-85a20.4	93	40.853	Gambusia_affinis
ENSRNOG00000053574	Tarbp1	87	43.270	ENSGACG00000005865	si:dkey-85a20.4	99	43.411	Gasterosteus_aculeatus
ENSRNOG00000053574	Tarbp1	99	59.875	ENSGAGG00000012102	TARBP1	99	60.100	Gopherus_agassizii
ENSRNOG00000053574	Tarbp1	86	70.796	ENSGGOG00000022879	TARBP1	99	70.796	Gorilla_gorilla
ENSRNOG00000053574	Tarbp1	87	43.472	ENSHBUG00000008877	si:dkey-85a20.4	85	43.472	Haplochromis_burtoni
ENSRNOG00000053574	Tarbp1	99	70.031	ENSHGLG00000011592	TARBP1	99	70.658	Heterocephalus_glaber_female
ENSRNOG00000053574	Tarbp1	94	72.583	ENSHGLG00100015169	TARBP1	99	72.583	Heterocephalus_glaber_male
ENSRNOG00000053574	Tarbp1	87	41.387	ENSIPUG00000005249	si:dkey-85a20.4	83	41.286	Ictalurus_punctatus
ENSRNOG00000053574	Tarbp1	89	69.948	ENSSTOG00000032291	TARBP1	100	70.022	Ictidomys_tridecemlineatus
ENSRNOG00000053574	Tarbp1	94	70.681	ENSJJAG00000017840	Tarbp1	99	70.681	Jaculus_jaculus
ENSRNOG00000053574	Tarbp1	79	44.011	ENSKMAG00000017546	si:dkey-85a20.4	91	44.011	Kryptolebias_marmoratus
ENSRNOG00000053574	Tarbp1	67	46.541	ENSLBEG00000012132	si:dkey-85a20.4	78	46.490	Labrus_bergylta
ENSRNOG00000053574	Tarbp1	99	47.084	ENSLACG00000004337	TARBP1	99	47.173	Latimeria_chalumnae
ENSRNOG00000053574	Tarbp1	99	44.337	ENSLOCG00000016214	si:dkey-85a20.4	100	44.337	Lepisosteus_oculatus
ENSRNOG00000053574	Tarbp1	96	65.421	ENSLAFG00000011394	TARBP1	100	66.371	Loxodonta_africana
ENSRNOG00000053574	Tarbp1	99	66.356	ENSMFAG00000041068	TARBP1	100	66.853	Macaca_fascicularis
ENSRNOG00000053574	Tarbp1	99	66.011	ENSMMUG00000021703	TARBP1	100	66.318	Macaca_mulatta
ENSRNOG00000053574	Tarbp1	99	68.269	ENSMNEG00000045002	TARBP1	100	68.577	Macaca_nemestrina
ENSRNOG00000053574	Tarbp1	86	71.091	ENSMLEG00000044182	TARBP1	100	71.091	Mandrillus_leucophaeus
ENSRNOG00000053574	Tarbp1	93	41.821	ENSMAMG00000021760	si:dkey-85a20.4	93	41.821	Mastacembelus_armatus
ENSRNOG00000053574	Tarbp1	87	43.530	ENSMZEG00005005751	si:dkey-85a20.4	85	43.530	Maylandia_zebra
ENSRNOG00000053574	Tarbp1	100	83.038	ENSMAUG00000020968	Tarbp1	100	83.038	Mesocricetus_auratus
ENSRNOG00000053574	Tarbp1	99	62.028	ENSMICG00000015280	TARBP1	99	62.670	Microcebus_murinus
ENSRNOG00000053574	Tarbp1	100	82.901	ENSMOCG00000004128	Tarbp1	100	82.901	Microtus_ochrogaster
ENSRNOG00000053574	Tarbp1	99	39.186	ENSMMOG00000007795	si:dkey-85a20.4	99	39.307	Mola_mola
ENSRNOG00000053574	Tarbp1	99	59.927	ENSMODG00000008504	TARBP1	99	60.242	Monodelphis_domestica
ENSRNOG00000053574	Tarbp1	87	42.385	ENSMALG00000002916	si:dkey-85a20.4	85	42.550	Monopterus_albus
ENSRNOG00000053574	Tarbp1	100	87.080	MGP_CAROLIEiJ_G0031729	Tarbp1	100	87.080	Mus_caroli
ENSRNOG00000053574	Tarbp1	100	86.637	ENSMUSG00000090290	Tarbp1	100	86.637	Mus_musculus
ENSRNOG00000053574	Tarbp1	100	87.666	MGP_PahariEiJ_G0023326	Tarbp1	100	87.666	Mus_pahari
ENSRNOG00000053574	Tarbp1	100	86.764	MGP_SPRETEiJ_G0032846	Tarbp1	100	86.764	Mus_spretus
ENSRNOG00000053574	Tarbp1	79	69.534	ENSMPUG00000002802	TARBP1	99	69.534	Mustela_putorius_furo
ENSRNOG00000053574	Tarbp1	86	66.497	ENSMLUG00000002414	TARBP1	99	67.326	Myotis_lucifugus
ENSRNOG00000053574	Tarbp1	99	68.561	ENSNLEG00000002518	TARBP1	99	68.870	Nomascus_leucogenys
ENSRNOG00000053574	Tarbp1	66	69.528	ENSMEUG00000011370	-	67	69.528	Notamacropus_eugenii
ENSRNOG00000053574	Tarbp1	72	71.927	ENSOPRG00000013822	TARBP1	71	71.927	Ochotona_princeps
ENSRNOG00000053574	Tarbp1	99	67.446	ENSODEG00000005238	TARBP1	99	67.573	Octodon_degus
ENSRNOG00000053574	Tarbp1	87	42.958	ENSONIG00000009789	si:dkey-85a20.4	99	43.139	Oreochromis_niloticus
ENSRNOG00000053574	Tarbp1	99	69.051	ENSOCUG00000017418	TARBP1	99	69.297	Oryctolagus_cuniculus
ENSRNOG00000053574	Tarbp1	87	42.202	ENSORLG00000010529	si:dkey-85a20.4	85	42.202	Oryzias_latipes
ENSRNOG00000053574	Tarbp1	87	41.849	ENSORLG00020019264	si:dkey-85a20.4	85	41.849	Oryzias_latipes_hni
ENSRNOG00000053574	Tarbp1	87	41.796	ENSORLG00015003276	si:dkey-85a20.4	85	41.796	Oryzias_latipes_hsok
ENSRNOG00000053574	Tarbp1	99	66.563	ENSOGAG00000002379	TARBP1	99	66.873	Otolemur_garnettii
ENSRNOG00000053574	Tarbp1	90	69.225	ENSOARG00000003434	TARBP1	99	65.171	Ovis_aries
ENSRNOG00000053574	Tarbp1	86	71.870	ENSPPAG00000028097	TARBP1	99	71.870	Pan_paniscus
ENSRNOG00000053574	Tarbp1	99	64.415	ENSPPRG00000013561	TARBP1	99	64.478	Panthera_pardus
ENSRNOG00000053574	Tarbp1	85	70.777	ENSPTIG00000009281	TARBP1	99	70.777	Panthera_tigris_altaica
ENSRNOG00000053574	Tarbp1	99	68.314	ENSPTRG00000002124	TARBP1	99	68.931	Pan_troglodytes
ENSRNOG00000053574	Tarbp1	99	68.515	ENSPANG00000021933	TARBP1	100	68.823	Papio_anubis
ENSRNOG00000053574	Tarbp1	99	41.766	ENSPKIG00000016716	si:dkey-85a20.4	99	41.766	Paramormyrops_kingsleyae
ENSRNOG00000053574	Tarbp1	81	61.652	ENSPSIG00000010699	TARBP1	99	61.652	Pelodiscus_sinensis
ENSRNOG00000053574	Tarbp1	99	82.877	ENSPEMG00000006888	Tarbp1	99	82.877	Peromyscus_maniculatus_bairdii
ENSRNOG00000053574	Tarbp1	90	82.000	ENSPCIG00000029710	TARBP1	98	82.000	Phascolarctos_cinereus
ENSRNOG00000053574	Tarbp1	87	42.180	ENSPFOG00000013020	si:dkey-85a20.4	99	42.251	Poecilia_formosa
ENSRNOG00000053574	Tarbp1	95	40.965	ENSPLAG00000006044	si:dkey-85a20.4	93	41.029	Poecilia_latipinna
ENSRNOG00000053574	Tarbp1	87	42.090	ENSPMEG00000017857	si:dkey-85a20.4	85	42.161	Poecilia_mexicana
ENSRNOG00000053574	Tarbp1	93	41.250	ENSPREG00000022753	si:dkey-85a20.4	91	41.316	Poecilia_reticulata
ENSRNOG00000053574	Tarbp1	91	69.231	ENSPPYG00000000102	TARBP1	99	69.231	Pongo_abelii
ENSRNOG00000053574	Tarbp1	81	87.162	ENSPCAG00000004808	TARBP1	81	87.162	Procavia_capensis
ENSRNOG00000053574	Tarbp1	99	66.088	ENSPCOG00000005666	TARBP1	99	66.708	Propithecus_coquereli
ENSRNOG00000053574	Tarbp1	99	57.170	ENSPVAG00000014798	TARBP1	99	57.980	Pteropus_vampyrus
ENSRNOG00000053574	Tarbp1	87	42.898	ENSPNYG00000019135	si:dkey-85a20.4	85	42.898	Pundamilia_nyererei
ENSRNOG00000053574	Tarbp1	93	78.788	ENSRBIG00000043362	TARBP1	99	78.788	Rhinopithecus_bieti
ENSRNOG00000053574	Tarbp1	99	67.045	ENSRROG00000029527	TARBP1	99	67.084	Rhinopithecus_roxellana
ENSRNOG00000053574	Tarbp1	89	71.291	ENSSBOG00000034503	TARBP1	99	71.291	Saimiri_boliviensis_boliviensis
ENSRNOG00000053574	Tarbp1	85	63.988	ENSSHAG00000000013	TARBP1	99	63.988	Sarcophilus_harrisii
ENSRNOG00000053574	Tarbp1	85	43.437	ENSSFOG00015002660	si:dkey-85a20.4	97	44.370	Scleropages_formosus
ENSRNOG00000053574	Tarbp1	86	43.772	ENSSMAG00000007081	si:dkey-85a20.4	99	40.332	Scophthalmus_maximus
ENSRNOG00000053574	Tarbp1	93	40.765	ENSSDUG00000023566	si:dkey-85a20.4	92	40.924	Seriola_dumerili
ENSRNOG00000053574	Tarbp1	93	41.950	ENSSLDG00000020200	si:dkey-85a20.4	92	42.109	Seriola_lalandi_dorsalis
ENSRNOG00000053574	Tarbp1	89	74.074	ENSSARG00000012207	TARBP1	89	74.074	Sorex_araneus
ENSRNOG00000053574	Tarbp1	99	56.079	ENSSPUG00000015364	TARBP1	99	56.417	Sphenodon_punctatus
ENSRNOG00000053574	Tarbp1	93	41.427	ENSSPAG00000007213	si:dkey-85a20.4	91	41.427	Stegastes_partitus
ENSRNOG00000053574	Tarbp1	99	68.145	ENSSSCG00000010160	TARBP1	99	68.577	Sus_scrofa
ENSRNOG00000053574	Tarbp1	82	59.389	ENSTGUG00000010214	TARBP1	100	59.389	Taeniopygia_guttata
ENSRNOG00000053574	Tarbp1	94	38.889	ENSTNIG00000016586	si:dkey-85a20.4	99	42.383	Tetraodon_nigroviridis
ENSRNOG00000053574	Tarbp1	92	66.743	ENSTTRG00000008707	TARBP1	96	66.743	Tursiops_truncatus
ENSRNOG00000053574	Tarbp1	83	70.877	ENSUMAG00000006730	TARBP1	99	70.877	Ursus_maritimus
ENSRNOG00000053574	Tarbp1	72	83.168	ENSVPAG00000007665	TARBP1	80	83.168	Vicugna_pacos
ENSRNOG00000053574	Tarbp1	89	68.895	ENSVVUG00000007460	TARBP1	99	73.759	Vulpes_vulpes
ENSRNOG00000053574	Tarbp1	86	49.708	ENSXETG00000016224	tarbp1	99	49.708	Xenopus_tropicalis
ENSRNOG00000053574	Tarbp1	78	45.245	ENSXCOG00000011779	si:dkey-85a20.4	91	45.380	Xiphophorus_couchianus
ENSRNOG00000053574	Tarbp1	66	40.613	ENSXMAG00000009600	si:dkey-85a20.4	100	40.613	Xiphophorus_maculatus