EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000054379 (Gene tree)
Gene ID: 501143
Gene Symbol: LOC108348134
Alias: LOC501143|RGD1559527
Full Name: protein boule-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 93308 bases
Position: chr9:61882333-61975640
Accession: 11425682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070691	RRM_1	PF00076.22	9.9e-20	1	1
ENSRNOP00000075469	RRM_1	PF00076.22	1.4e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091519	-	1294	-	ENSRNOP00000075469	360 (aa)	-	A0A0G2K6M1
ENSRNOT00000085744	-	1047	XM_003750700	ENSRNOP00000070691	293 (aa)	XP_003750748	D4ACT7

Gene Model

Click here to download ENSRNOG00000054379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054379	LOC108348134	100	100.000	ENSRNOG00000015798	Boll	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054379	LOC108348134	98	92.014	ENSG00000152430	BOLL	100	91.954	Homo_sapiens
ENSRNOG00000054379	LOC108348134	82	44.813	ENSAPOG00000007050	-	81	44.167	Acanthochromis_polyacanthus
ENSRNOG00000054379	LOC108348134	99	94.178	ENSAMEG00000013712	BOLL	99	94.178	Ailuropoda_melanoleuca
ENSRNOG00000054379	LOC108348134	85	46.743	ENSAOCG00000023373	-	75	46.899	Amphiprion_ocellaris
ENSRNOG00000054379	LOC108348134	86	42.188	ENSAPEG00000005335	-	86	50.000	Amphiprion_percula
ENSRNOG00000054379	LOC108348134	98	78.397	ENSAPLG00000006193	BOLL	99	77.397	Anas_platyrhynchos
ENSRNOG00000054379	LOC108348134	57	39.766	ENSAPLG00000007738	-	58	39.766	Anas_platyrhynchos
ENSRNOG00000054379	LOC108348134	57	38.012	ENSACAG00000007822	-	55	38.012	Anolis_carolinensis
ENSRNOG00000054379	LOC108348134	96	89.286	ENSACAG00000009285	BOLL	88	89.286	Anolis_carolinensis
ENSRNOG00000054379	LOC108348134	73	37.443	ENSANAG00000034405	DAZL	80	33.852	Aotus_nancymaae
ENSRNOG00000054379	LOC108348134	55	88.750	ENSANAG00000031449	-	97	88.506	Aotus_nancymaae
ENSRNOG00000054379	LOC108348134	98	44.518	ENSACLG00000002494	-	76	46.768	Astatotilapia_calliptera
ENSRNOG00000054379	LOC108348134	69	52.511	ENSAMXG00000005058	-	74	55.026	Astyanax_mexicanus
ENSRNOG00000054379	LOC108348134	98	96.875	ENSBTAG00000031614	BOLL	98	96.875	Bos_taurus
ENSRNOG00000054379	LOC108348134	73	38.326	ENSCJAG00000039120	DAZL	78	36.986	Callithrix_jacchus
ENSRNOG00000054379	LOC108348134	99	91.781	ENSCJAG00000004092	BOLL	98	96.855	Callithrix_jacchus
ENSRNOG00000054379	LOC108348134	99	95.205	ENSCAFG00000010947	BOLL	99	95.205	Canis_familiaris
ENSRNOG00000054379	LOC108348134	100	95.563	ENSCAFG00020004659	BOLL	100	95.563	Canis_lupus_dingo
ENSRNOG00000054379	LOC108348134	96	92.171	ENSCHIG00000024995	BOLL	98	92.171	Capra_hircus
ENSRNOG00000054379	LOC108348134	98	92.388	ENSTSYG00000014204	BOLL	98	92.388	Carlito_syrichta
ENSRNOG00000054379	LOC108348134	79	78.788	ENSCAPG00000001013	BOLL	91	78.788	Cavia_aperea
ENSRNOG00000054379	LOC108348134	98	90.909	ENSCPOG00000000390	BOLL	99	90.909	Cavia_porcellus
ENSRNOG00000054379	LOC108348134	73	36.986	ENSCCAG00000035747	DAZL	80	33.463	Cebus_capucinus
ENSRNOG00000054379	LOC108348134	98	93.056	ENSCCAG00000026623	BOLL	98	93.056	Cebus_capucinus
ENSRNOG00000054379	LOC108348134	98	91.319	ENSCATG00000004430	BOLL	98	91.319	Cercocebus_atys
ENSRNOG00000054379	LOC108348134	88	93.822	ENSCLAG00000017375	BOLL	95	93.985	Chinchilla_lanigera
ENSRNOG00000054379	LOC108348134	98	92.708	ENSCSAG00000011399	BOLL	98	92.708	Chlorocebus_sabaeus
ENSRNOG00000054379	LOC108348134	79	64.427	ENSCHOG00000012634	BOLL	88	64.427	Choloepus_hoffmanni
ENSRNOG00000054379	LOC108348134	56	40.936	ENSCPBG00000022547	-	64	40.936	Chrysemys_picta_bellii
ENSRNOG00000054379	LOC108348134	94	93.455	ENSCANG00000042186	BOLL	97	93.455	Colobus_angolensis_palliatus
ENSRNOG00000054379	LOC108348134	100	98.976	ENSCGRG00001020168	Boll	100	98.976	Cricetulus_griseus_chok1gshd
ENSRNOG00000054379	LOC108348134	95	98.561	ENSCGRG00000004549	Boll	98	98.561	Cricetulus_griseus_crigri
ENSRNOG00000054379	LOC108348134	73	40.444	ENSCVAG00000008027	-	68	40.889	Cyprinodon_variegatus
ENSRNOG00000054379	LOC108348134	96	96.797	ENSDNOG00000017076	BOLL	83	96.797	Dasypus_novemcinctus
ENSRNOG00000054379	LOC108348134	96	96.786	ENSDORG00000010791	Boll	100	96.786	Dipodomys_ordii
ENSRNOG00000054379	LOC108348134	98	94.792	ENSEASG00005020122	BOLL	98	94.792	Equus_asinus_asinus
ENSRNOG00000054379	LOC108348134	99	90.068	ENSECAG00000040654	BOLL	99	90.747	Equus_caballus
ENSRNOG00000054379	LOC108348134	76	94.709	ENSEEUG00000003441	BOLL	66	94.709	Erinaceus_europaeus
ENSRNOG00000054379	LOC108348134	80	63.600	ENSELUG00000002317	-	70	63.600	Esox_lucius
ENSRNOG00000054379	LOC108348134	98	96.181	ENSFCAG00000018564	BOLL	98	96.181	Felis_catus
ENSRNOG00000054379	LOC108348134	93	70.280	ENSFALG00000004255	BOLL	96	70.280	Ficedula_albicollis
ENSRNOG00000054379	LOC108348134	55	37.647	ENSFALG00000008893	-	67	37.647	Ficedula_albicollis
ENSRNOG00000054379	LOC108348134	88	93.822	ENSFDAG00000013036	BOLL	95	93.985	Fukomys_damarensis
ENSRNOG00000054379	LOC108348134	83	42.748	ENSFHEG00000000765	-	75	43.404	Fundulus_heteroclitus
ENSRNOG00000054379	LOC108348134	65	32.850	ENSGMOG00000011491	dazl	87	45.977	Gadus_morhua
ENSRNOG00000054379	LOC108348134	63	36.325	ENSGALG00000011243	DAZL	76	36.481	Gallus_gallus
ENSRNOG00000054379	LOC108348134	74	46.053	ENSGAFG00000003461	-	65	44.934	Gambusia_affinis
ENSRNOG00000054379	LOC108348134	87	40.892	ENSGACG00000014439	-	92	42.182	Gasterosteus_aculeatus
ENSRNOG00000054379	LOC108348134	94	93.091	ENSGGOG00000013594	BOLL	96	96.875	Gorilla_gorilla
ENSRNOG00000054379	LOC108348134	98	44.518	ENSHBUG00000003183	-	76	46.768	Haplochromis_burtoni
ENSRNOG00000054379	LOC108348134	97	86.926	ENSHGLG00000017562	BOLL	97	86.926	Heterocephalus_glaber_female
ENSRNOG00000054379	LOC108348134	88	89.575	ENSHGLG00100015094	BOLL	95	89.474	Heterocephalus_glaber_male
ENSRNOG00000054379	LOC108348134	86	52.206	ENSIPUG00000021346	boll	72	51.471	Ictalurus_punctatus
ENSRNOG00000054379	LOC108348134	98	95.833	ENSSTOG00000003536	BOLL	98	96.029	Ictidomys_tridecemlineatus
ENSRNOG00000054379	LOC108348134	94	96.727	ENSJJAG00000015508	Boll	100	96.809	Jaculus_jaculus
ENSRNOG00000054379	LOC108348134	82	44.444	ENSKMAG00000002689	-	69	46.491	Kryptolebias_marmoratus
ENSRNOG00000054379	LOC108348134	62	38.947	ENSLACG00000002895	-	61	39.362	Latimeria_chalumnae
ENSRNOG00000054379	LOC108348134	100	80.921	ENSLACG00000015867	BOLL	88	80.921	Latimeria_chalumnae
ENSRNOG00000054379	LOC108348134	69	50.661	ENSLOCG00000004003	BOLL	78	50.220	Lepisosteus_oculatus
ENSRNOG00000054379	LOC108348134	98	96.154	ENSLAFG00000010956	BOLL	100	96.154	Loxodonta_africana
ENSRNOG00000054379	LOC108348134	99	92.440	ENSMFAG00000030962	BOLL	99	92.440	Macaca_fascicularis
ENSRNOG00000054379	LOC108348134	98	92.708	ENSMMUG00000023811	BOLL	99	93.165	Macaca_mulatta
ENSRNOG00000054379	LOC108348134	98	92.708	ENSMNEG00000033015	BOLL	99	93.165	Macaca_nemestrina
ENSRNOG00000054379	LOC108348134	94	92.364	ENSMLEG00000023905	BOLL	97	92.364	Mandrillus_leucophaeus
ENSRNOG00000054379	LOC108348134	98	44.518	ENSMZEG00005008450	-	76	46.768	Maylandia_zebra
ENSRNOG00000054379	LOC108348134	57	40.936	ENSMGAG00000010878	-	58	40.936	Meleagris_gallopavo
ENSRNOG00000054379	LOC108348134	100	98.635	ENSMAUG00000008224	Boll	100	98.635	Mesocricetus_auratus
ENSRNOG00000054379	LOC108348134	98	96.181	ENSMICG00000011845	BOLL	98	96.181	Microcebus_murinus
ENSRNOG00000054379	LOC108348134	94	96.364	ENSMOCG00000022824	Boll	100	96.454	Microtus_ochrogaster
ENSRNOG00000054379	LOC108348134	98	96.181	ENSMODG00000012323	BOLL	98	96.181	Monodelphis_domestica
ENSRNOG00000054379	LOC108348134	73	50.439	ENSMALG00000016791	-	67	49.561	Monopterus_albus
ENSRNOG00000054379	LOC108348134	100	98.294	ENSMUSG00000025977	Boll	100	98.936	Mus_musculus
ENSRNOG00000054379	LOC108348134	100	97.611	MGP_PahariEiJ_G0027387	Boll	100	97.701	Mus_pahari
ENSRNOG00000054379	LOC108348134	99	95.502	ENSMPUG00000007922	BOLL	98	95.502	Mustela_putorius_furo
ENSRNOG00000054379	LOC108348134	98	93.403	ENSMLUG00000004999	BOLL	97	93.403	Myotis_lucifugus
ENSRNOG00000054379	LOC108348134	74	42.661	ENSNBRG00000019918	-	83	42.661	Neolamprologus_brichardi
ENSRNOG00000054379	LOC108348134	94	93.455	ENSNLEG00000006885	BOLL	96	96.875	Nomascus_leucogenys
ENSRNOG00000054379	LOC108348134	85	71.852	ENSMEUG00000011305	BOLL	80	71.852	Notamacropus_eugenii
ENSRNOG00000054379	LOC108348134	96	75.251	ENSOPRG00000013693	BOLL	90	75.503	Ochotona_princeps
ENSRNOG00000054379	LOC108348134	89	86.692	ENSODEG00000008471	BOLL	95	85.714	Octodon_degus
ENSRNOG00000054379	LOC108348134	87	49.430	ENSONIG00000015267	-	99	48.864	Oreochromis_niloticus
ENSRNOG00000054379	LOC108348134	56	87.730	ENSOANG00000019928	-	85	92.029	Ornithorhynchus_anatinus
ENSRNOG00000054379	LOC108348134	96	95.730	ENSOCUG00000013979	BOLL	97	95.730	Oryctolagus_cuniculus
ENSRNOG00000054379	LOC108348134	86	39.847	ENSORLG00000025401	boll	54	39.847	Oryzias_latipes
ENSRNOG00000054379	LOC108348134	65	42.000	ENSOMEG00000007266	-	59	42.000	Oryzias_melastigma
ENSRNOG00000054379	LOC108348134	99	95.848	ENSOGAG00000007207	BOLL	98	95.848	Otolemur_garnettii
ENSRNOG00000054379	LOC108348134	98	96.181	ENSOARG00000015644	BOLL	98	96.181	Ovis_aries
ENSRNOG00000054379	LOC108348134	94	92.727	ENSPPAG00000033757	BOLL	96	96.875	Pan_paniscus
ENSRNOG00000054379	LOC108348134	98	96.528	ENSPPRG00000007352	BOLL	98	96.528	Panthera_pardus
ENSRNOG00000054379	LOC108348134	98	96.528	ENSPTIG00000011925	BOLL	98	96.528	Panthera_tigris_altaica
ENSRNOG00000054379	LOC108348134	94	92.727	ENSPTRG00000012777	BOLL	96	96.875	Pan_troglodytes
ENSRNOG00000054379	LOC108348134	98	92.708	ENSPANG00000009570	BOLL	98	92.708	Papio_anubis
ENSRNOG00000054379	LOC108348134	98	61.311	ENSPKIG00000000551	BOLL	85	60.984	Paramormyrops_kingsleyae
ENSRNOG00000054379	LOC108348134	98	87.153	ENSPSIG00000018004	BOLL	86	87.153	Pelodiscus_sinensis
ENSRNOG00000054379	LOC108348134	57	40.805	ENSPSIG00000009803	-	53	40.805	Pelodiscus_sinensis
ENSRNOG00000054379	LOC108348134	52	43.750	ENSPMGG00000017006	-	65	47.059	Periophthalmus_magnuspinnatus
ENSRNOG00000054379	LOC108348134	100	97.619	ENSPEMG00000018168	Boll	100	97.880	Peromyscus_maniculatus_bairdii
ENSRNOG00000054379	LOC108348134	88	57.197	ENSPMAG00000009126	BOLL	90	55.056	Petromyzon_marinus
ENSRNOG00000054379	LOC108348134	96	75.000	ENSPCIG00000029134	-	91	74.242	Phascolarctos_cinereus
ENSRNOG00000054379	LOC108348134	96	92.982	ENSPCIG00000010605	-	94	92.982	Phascolarctos_cinereus
ENSRNOG00000054379	LOC108348134	74	43.363	ENSPFOG00000005602	-	64	42.731	Poecilia_formosa
ENSRNOG00000054379	LOC108348134	74	46.725	ENSPLAG00000006076	-	65	45.415	Poecilia_latipinna
ENSRNOG00000054379	LOC108348134	80	42.979	ENSPMEG00000022615	-	78	44.144	Poecilia_mexicana
ENSRNOG00000054379	LOC108348134	74	46.725	ENSPREG00000012098	-	65	45.415	Poecilia_reticulata
ENSRNOG00000054379	LOC108348134	96	92.527	ENSPPYG00000013050	BOLL	98	92.527	Pongo_abelii
ENSRNOG00000054379	LOC108348134	90	75.445	ENSPCOG00000002476	BOLL	100	92.222	Propithecus_coquereli
ENSRNOG00000054379	LOC108348134	68	88.688	ENSPVAG00000015269	BOLL	77	88.688	Pteropus_vampyrus
ENSRNOG00000054379	LOC108348134	85	54.340	ENSPNAG00000023174	-	75	52.672	Pygocentrus_nattereri
ENSRNOG00000054379	LOC108348134	98	91.667	ENSRBIG00000042131	BOLL	97	93.091	Rhinopithecus_bieti
ENSRNOG00000054379	LOC108348134	98	91.667	ENSRROG00000016942	BOLL	98	91.667	Rhinopithecus_roxellana
ENSRNOG00000054379	LOC108348134	96	92.883	ENSSBOG00000027161	BOLL	98	92.883	Saimiri_boliviensis_boliviensis
ENSRNOG00000054379	LOC108348134	73	37.668	ENSSBOG00000033845	DAZL	80	34.100	Saimiri_boliviensis_boliviensis
ENSRNOG00000054379	LOC108348134	87	96.863	ENSSHAG00000018057	BOLL	92	96.813	Sarcophilus_harrisii
ENSRNOG00000054379	LOC108348134	85	54.198	ENSSFOG00015023350	boll	74	54.198	Scleropages_formosus
ENSRNOG00000054379	LOC108348134	85	53.053	ENSSDUG00000004624	-	74	51.504	Seriola_dumerili
ENSRNOG00000054379	LOC108348134	81	48.760	ENSSLDG00000003410	-	89	47.107	Seriola_lalandi_dorsalis
ENSRNOG00000054379	LOC108348134	96	96.786	ENSSSCG00000016082	BOLL	100	96.786	Sus_scrofa
ENSRNOG00000054379	LOC108348134	94	69.091	ENSTGUG00000010496	BOLL	100	69.091	Taeniopygia_guttata
ENSRNOG00000054379	LOC108348134	74	36.364	ENSTGUG00000003145	-	70	35.931	Taeniopygia_guttata
ENSRNOG00000054379	LOC108348134	65	40.097	ENSTRUG00000021705	-	50	45.455	Takifugu_rubripes
ENSRNOG00000054379	LOC108348134	84	82.927	ENSTBEG00000017343	BOLL	72	82.927	Tupaia_belangeri
ENSRNOG00000054379	LOC108348134	100	91.809	ENSUAMG00000016037	BOLL	100	91.809	Ursus_americanus
ENSRNOG00000054379	LOC108348134	100	91.809	ENSUMAG00000020969	BOLL	100	91.809	Ursus_maritimus
ENSRNOG00000054379	LOC108348134	100	95.563	ENSVVUG00000025901	BOLL	100	95.563	Vulpes_vulpes
ENSRNOG00000054379	LOC108348134	74	46.087	ENSXMAG00000021766	-	65	46.460	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0007281	germ cell development	-	IEA	Process
GO:0008494	translation activator activity	21873635.	IBA	Function
GO:0008494	translation activator activity	-	ISO	Function
GO:0045948	positive regulation of translational initiation	21873635.	IBA	Process
GO:0045948	positive regulation of translational initiation	-	ISO	Process
GO:0051321	meiotic cell cycle	-	ISO	Process
GO:0070935	3'-UTR-mediated mRNA stabilization	21873635.	IBA	Process