EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000054446 (Gene tree)
Gene ID: 315792
Gene Symbol: Sltm
Alias: LOC315792|RGD1307526
Full Name: SAFB-like%2C transcription modulator
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 45016 bases
Position: chr8:76977822-77022837
Accession: 1307526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074807	RRM_5	PF13893.6	2e-07	1	1
ENSRNOP00000074807	RRM_1	PF00076.22	6.2e-11	1	1
ENSRNOP00000074807	SAP	PF02037.27	4e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090268	-	3732	-	ENSRNOP00000074807	1034 (aa)	-	A0A0G2K904

Gene Model

Click here to download ENSRNOG00000054446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054446	Sltm	98	90.659	ENSG00000137776	SLTM	100	89.000	Homo_sapiens
ENSRNOG00000054446	Sltm	95	89.093	ENSAMEG00000004537	SLTM	59	89.619	Ailuropoda_melanoleuca
ENSRNOG00000054446	Sltm	99	47.530	ENSACIG00000001971	sltm	99	47.329	Amphilophus_citrinellus
ENSRNOG00000054446	Sltm	99	48.753	ENSATEG00000003763	sltm	59	45.016	Anabas_testudineus
ENSRNOG00000054446	Sltm	95	75.862	ENSAPLG00000013025	SLTM	59	74.872	Anas_platyrhynchos
ENSRNOG00000054446	Sltm	98	69.216	ENSACAG00000015120	SLTM	59	66.561	Anolis_carolinensis
ENSRNOG00000054446	Sltm	98	89.971	ENSANAG00000037031	SLTM	63	89.744	Aotus_nancymaae
ENSRNOG00000054446	Sltm	83	48.837	ENSACLG00000002523	sltm	99	48.405	Astatotilapia_calliptera
ENSRNOG00000054446	Sltm	90	88.937	ENSBTAG00000011319	SLTM	55	89.394	Bos_taurus
ENSRNOG00000054446	Sltm	98	89.479	ENSCJAG00000020395	SLTM	63	89.744	Callithrix_jacchus
ENSRNOG00000054446	Sltm	99	87.182	ENSCAFG00000016586	SLTM	59	87.662	Canis_familiaris
ENSRNOG00000054446	Sltm	98	88.409	ENSCAFG00020011253	SLTM	95	89.448	Canis_lupus_dingo
ENSRNOG00000054446	Sltm	98	88.692	ENSCHIG00000008780	SLTM	59	88.636	Capra_hircus
ENSRNOG00000054446	Sltm	95	90.102	ENSTSYG00000013581	SLTM	56	90.815	Carlito_syrichta
ENSRNOG00000054446	Sltm	88	89.846	ENSCPOG00000026109	SLTM	67	89.919	Cavia_porcellus
ENSRNOG00000054446	Sltm	98	90.167	ENSCCAG00000022982	SLTM	63	89.744	Cebus_capucinus
ENSRNOG00000054446	Sltm	98	90.560	ENSCATG00000030254	SLTM	63	89.744	Cercocebus_atys
ENSRNOG00000054446	Sltm	91	86.441	ENSCLAG00000007160	SLTM	61	87.695	Chinchilla_lanigera
ENSRNOG00000054446	Sltm	98	90.462	ENSCSAG00000012004	SLTM	60	91.071	Chlorocebus_sabaeus
ENSRNOG00000054446	Sltm	98	78.224	ENSCPBG00000006045	SLTM	58	76.006	Chrysemys_picta_bellii
ENSRNOG00000054446	Sltm	95	90.510	ENSCANG00000043731	SLTM	59	90.988	Colobus_angolensis_palliatus
ENSRNOG00000054446	Sltm	95	47.468	ENSCSEG00000001618	sltm	96	44.861	Cynoglossus_semilaevis
ENSRNOG00000054446	Sltm	78	55.083	ENSDARG00000052728	sltm	91	62.800	Danio_rerio
ENSRNOG00000054446	Sltm	99	88.552	ENSDNOG00000002975	SLTM	59	89.286	Dasypus_novemcinctus
ENSRNOG00000054446	Sltm	76	90.519	ENSDORG00000007463	Sltm	85	90.562	Dipodomys_ordii
ENSRNOG00000054446	Sltm	55	88.792	ENSETEG00000008003	SLTM	59	88.388	Echinops_telfairi
ENSRNOG00000054446	Sltm	98	90.246	ENSEASG00005006792	SLTM	60	91.234	Equus_asinus_asinus
ENSRNOG00000054446	Sltm	98	90.345	ENSECAG00000011267	SLTM	60	91.396	Equus_caballus
ENSRNOG00000054446	Sltm	86	86.173	ENSEEUG00000000580	SLTM	73	86.173	Erinaceus_europaeus
ENSRNOG00000054446	Sltm	99	48.287	ENSELUG00000013388	sltm	92	46.999	Esox_lucius
ENSRNOG00000054446	Sltm	98	90.364	ENSFCAG00000004826	SLTM	63	92.308	Felis_catus
ENSRNOG00000054446	Sltm	95	74.949	ENSFALG00000012285	SLTM	59	72.384	Ficedula_albicollis
ENSRNOG00000054446	Sltm	95	88.469	ENSFDAG00000018075	SLTM	59	90.468	Fukomys_damarensis
ENSRNOG00000054446	Sltm	99	48.169	ENSGACG00000015814	sltm	59	44.855	Gasterosteus_aculeatus
ENSRNOG00000054446	Sltm	98	77.051	ENSGAGG00000021279	SLTM	59	75.684	Gopherus_agassizii
ENSRNOG00000054446	Sltm	98	90.659	ENSGGOG00000015866	SLTM	68	89.744	Gorilla_gorilla
ENSRNOG00000054446	Sltm	83	48.837	ENSHBUG00000012461	sltm	91	48.891	Haplochromis_burtoni
ENSRNOG00000054446	Sltm	99	72.367	ENSHGLG00000015426	-	61	81.759	Heterocephalus_glaber_female
ENSRNOG00000054446	Sltm	99	87.234	ENSHGLG00000018512	-	60	89.431	Heterocephalus_glaber_female
ENSRNOG00000054446	Sltm	99	75.170	ENSHGLG00100001757	-	62	81.553	Heterocephalus_glaber_male
ENSRNOG00000054446	Sltm	99	71.582	ENSHGLG00100002576	-	61	75.980	Heterocephalus_glaber_male
ENSRNOG00000054446	Sltm	99	81.704	ENSHGLG00100002674	-	61	86.829	Heterocephalus_glaber_male
ENSRNOG00000054446	Sltm	95	89.898	ENSSTOG00000000584	SLTM	59	90.641	Ictidomys_tridecemlineatus
ENSRNOG00000054446	Sltm	99	46.360	ENSKMAG00000007570	sltm	61	42.485	Kryptolebias_marmoratus
ENSRNOG00000054446	Sltm	83	47.573	ENSLBEG00000025472	sltm	52	46.351	Labrus_bergylta
ENSRNOG00000054446	Sltm	98	86.922	ENSLAFG00000017922	SLTM	80	91.608	Loxodonta_africana
ENSRNOG00000054446	Sltm	98	90.560	ENSMFAG00000033354	SLTM	63	89.744	Macaca_fascicularis
ENSRNOG00000054446	Sltm	98	90.560	ENSMMUG00000022200	SLTM	92	90.625	Macaca_mulatta
ENSRNOG00000054446	Sltm	98	90.462	ENSMNEG00000025105	SLTM	60	90.909	Macaca_nemestrina
ENSRNOG00000054446	Sltm	98	90.364	ENSMLEG00000043355	SLTM	63	89.744	Mandrillus_leucophaeus
ENSRNOG00000054446	Sltm	99	48.496	ENSMAMG00000021391	sltm	51	43.969	Mastacembelus_armatus
ENSRNOG00000054446	Sltm	83	48.837	ENSMZEG00005013839	sltm	99	48.405	Maylandia_zebra
ENSRNOG00000054446	Sltm	96	72.244	ENSMGAG00000005313	SLTM	60	70.202	Meleagris_gallopavo
ENSRNOG00000054446	Sltm	98	89.676	ENSMICG00000013069	SLTM	63	89.744	Microcebus_murinus
ENSRNOG00000054446	Sltm	82	49.359	ENSMALG00000021474	sltm	51	45.594	Monopterus_albus
ENSRNOG00000054446	Sltm	99	96.217	ENSMUSG00000032212	Sltm	99	96.217	Mus_musculus
ENSRNOG00000054446	Sltm	99	96.023	MGP_SPRETEiJ_G0033542	Sltm	99	96.023	Mus_spretus
ENSRNOG00000054446	Sltm	97	86.871	ENSMPUG00000004229	SLTM	57	87.858	Mustela_putorius_furo
ENSRNOG00000054446	Sltm	95	87.602	ENSMLUG00000000742	SLTM	59	89.428	Myotis_lucifugus
ENSRNOG00000054446	Sltm	81	48.512	ENSNBRG00000010183	sltm	56	43.528	Neolamprologus_brichardi
ENSRNOG00000054446	Sltm	98	90.373	ENSNLEG00000011440	SLTM	60	90.732	Nomascus_leucogenys
ENSRNOG00000054446	Sltm	98	69.765	ENSMEUG00000015230	SLTM	60	67.205	Notamacropus_eugenii
ENSRNOG00000054446	Sltm	95	85.685	ENSODEG00000017077	SLTM	59	88.276	Octodon_degus
ENSRNOG00000054446	Sltm	99	48.833	ENSONIG00000005838	sltm	98	48.906	Oreochromis_niloticus
ENSRNOG00000054446	Sltm	75	90.617	ENSOCUG00000003327	SLTM	65	90.186	Oryctolagus_cuniculus
ENSRNOG00000054446	Sltm	83	44.697	ENSORLG00000008161	sltm	99	41.698	Oryzias_latipes
ENSRNOG00000054446	Sltm	98	44.423	ENSORLG00020008903	sltm	99	41.985	Oryzias_latipes_hni
ENSRNOG00000054446	Sltm	83	44.697	ENSORLG00015007103	sltm	99	41.889	Oryzias_latipes_hsok
ENSRNOG00000054446	Sltm	81	46.571	ENSOMEG00000002041	sltm	98	45.603	Oryzias_melastigma
ENSRNOG00000054446	Sltm	98	89.381	ENSOGAG00000011297	SLTM	60	90.097	Otolemur_garnettii
ENSRNOG00000054446	Sltm	99	88.544	ENSOARG00000020844	SLTM	60	88.636	Ovis_aries
ENSRNOG00000054446	Sltm	98	88.889	ENSPPAG00000029308	SLTM	63	89.744	Pan_paniscus
ENSRNOG00000054446	Sltm	98	89.971	ENSPPRG00000012400	SLTM	63	92.308	Panthera_pardus
ENSRNOG00000054446	Sltm	95	90.000	ENSPTIG00000021933	SLTM	56	90.815	Panthera_tigris_altaica
ENSRNOG00000054446	Sltm	98	90.659	ENSPTRG00000007121	SLTM	63	89.744	Pan_troglodytes
ENSRNOG00000054446	Sltm	98	88.322	ENSPANG00000017193	SLTM	63	89.744	Papio_anubis
ENSRNOG00000054446	Sltm	98	75.660	ENSPSIG00000005489	SLTM	60	76.006	Pelodiscus_sinensis
ENSRNOG00000054446	Sltm	98	81.134	ENSPCIG00000028356	SLTM	98	80.192	Phascolarctos_cinereus
ENSRNOG00000054446	Sltm	99	44.828	ENSPFOG00000004372	sltm	91	45.583	Poecilia_formosa
ENSRNOG00000054446	Sltm	84	44.315	ENSPLAG00000008000	sltm	91	45.702	Poecilia_latipinna
ENSRNOG00000054446	Sltm	82	45.633	ENSPREG00000023236	sltm	91	45.702	Poecilia_reticulata
ENSRNOG00000054446	Sltm	98	89.086	ENSPPYG00000006515	SLTM	60	88.474	Pongo_abelii
ENSRNOG00000054446	Sltm	99	76.402	ENSPCAG00000013482	SLTM	90	79.553	Procavia_capensis
ENSRNOG00000054446	Sltm	98	89.479	ENSPCOG00000010624	SLTM	63	92.308	Propithecus_coquereli
ENSRNOG00000054446	Sltm	98	87.414	ENSPVAG00000015056	SLTM	60	86.688	Pteropus_vampyrus
ENSRNOG00000054446	Sltm	83	48.837	ENSPNYG00000013893	sltm	91	48.891	Pundamilia_nyererei
ENSRNOG00000054446	Sltm	77	56.563	ENSPNAG00000020563	sltm	58	48.200	Pygocentrus_nattereri
ENSRNOG00000054446	Sltm	95	90.510	ENSRBIG00000029226	SLTM	59	90.988	Rhinopithecus_bieti
ENSRNOG00000054446	Sltm	98	90.462	ENSRROG00000045301	SLTM	63	89.744	Rhinopithecus_roxellana
ENSRNOG00000054446	Sltm	98	90.167	ENSSBOG00000018883	SLTM	63	89.744	Saimiri_boliviensis_boliviensis
ENSRNOG00000054446	Sltm	95	80.061	ENSSHAG00000015395	SLTM	58	78.313	Sarcophilus_harrisii
ENSRNOG00000054446	Sltm	99	47.993	ENSSMAG00000000355	sltm	60	42.031	Scophthalmus_maximus
ENSRNOG00000054446	Sltm	83	50.052	ENSSDUG00000018134	sltm	60	43.818	Seriola_dumerili
ENSRNOG00000054446	Sltm	83	50.000	ENSSLDG00000013907	sltm	60	43.505	Seriola_lalandi_dorsalis
ENSRNOG00000054446	Sltm	98	88.102	ENSSSCG00000004592	SLTM	95	90.584	Sus_scrofa
ENSRNOG00000054446	Sltm	92	73.899	ENSTGUG00000006017	SLTM	57	71.818	Taeniopygia_guttata
ENSRNOG00000054446	Sltm	95	84.286	ENSTBEG00000000945	SLTM	59	81.629	Tupaia_belangeri
ENSRNOG00000054446	Sltm	99	90.019	ENSTTRG00000005246	SLTM	60	90.584	Tursiops_truncatus
ENSRNOG00000054446	Sltm	78	89.826	ENSUAMG00000025901	SLTM	50	91.067	Ursus_americanus
ENSRNOG00000054446	Sltm	96	87.827	ENSUMAG00000023678	SLTM	97	88.476	Ursus_maritimus
ENSRNOG00000054446	Sltm	95	89.501	ENSVPAG00000008606	SLTM	59	90.121	Vicugna_pacos
ENSRNOG00000054446	Sltm	98	89.096	ENSVVUG00000001450	SLTM	64	93.443	Vulpes_vulpes
ENSRNOG00000054446	Sltm	84	44.740	ENSXMAG00000014466	sltm	91	45.702	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component