EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000054519 (Gene tree)
Gene ID: -
Gene Symbol: AABR07053179.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5520 bases
Position: chr3:95614562-95620081
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000075743	RVT_1	PF00078.27	3.4e-53	1	1
ENSRNOP00000075743	Transposase_22	PF02994.14	1.2e-46	1	1
ENSRNOP00000075743	Exo_endo_phos	PF03372.23	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079990	AABR07053179.1-201	5133	-	ENSRNOP00000075743	1711 (aa)	-	A0A0G2KBC8

Gene Model

Click here to download ENSRNOG00000054519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054519	AABR07053179.1	94	98.383	ENSRNOG00000056748	AC229945.1	100	98.383
ENSRNOG00000054519	AABR07053179.1	97	97.714	ENSRNOG00000059133	AABR07020537.1	100	97.714
ENSRNOG00000054519	AABR07053179.1	59	98.753	ENSRNOG00000057039	AC124874.1	92	98.753
ENSRNOG00000054519	AABR07053179.1	59	93.566	ENSRNOG00000058277	AC080157.1	75	98.580
ENSRNOG00000054519	AABR07053179.1	94	98.328	ENSRNOG00000047294	AABR07043115.1	100	98.328
ENSRNOG00000054519	AABR07053179.1	100	98.014	ENSRNOG00000059691	AABR07033318.1	100	98.014
ENSRNOG00000054519	AABR07053179.1	97	97.538	ENSRNOG00000056033	AC111632.2	100	97.538
ENSRNOG00000054519	AABR07053179.1	61	93.995	ENSRNOG00000060618	AABR07027267.1	76	98.895
ENSRNOG00000054519	AABR07053179.1	60	93.566	ENSRNOG00000045583	AABR07002068.1	75	98.580
ENSRNOG00000054519	AABR07053179.1	61	92.703	ENSRNOG00000034030	AC130162.1	78	92.703
ENSRNOG00000054519	AABR07053179.1	53	95.490	ENSRNOG00000005861	Hsd11b1	81	95.490
ENSRNOG00000054519	AABR07053179.1	100	97.838	ENSRNOG00000049504	AABR07009221.1	100	97.838
ENSRNOG00000054519	AABR07053179.1	95	98.284	ENSRNOG00000058209	AABR07063893.1	100	98.284
ENSRNOG00000054519	AABR07053179.1	95	98.098	ENSRNOG00000060742	AABR07029809.1	100	98.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054519	AABR07053179.1	52	65.614	ENSBTAG00000049728	-	99	65.614	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	60	64.071	ENSBTAG00000050534	-	91	64.071	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	69	63.163	ENSBTAG00000050965	-	92	63.163	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	65	63.432	ENSBTAG00000051208	-	92	63.432	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	63	63.815	ENSBTAG00000049055	-	92	63.815	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	65	63.163	ENSBTAG00000053324	-	93	63.163	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	59	64.012	ENSBTAG00000054392	-	97	64.012	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	69	63.342	ENSBTAG00000053316	-	92	63.342	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	50	65.308	ENSBTAG00000051999	-	99	65.308	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	61	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	67	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	50	64.671	ENSBTAG00000050251	-	99	64.671	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	51	65.193	ENSBTAG00000051121	-	99	65.193	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	69	63.252	ENSBTAG00000050847	-	92	63.252	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	50	65.217	ENSBTAG00000054826	-	98	65.217	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	69	63.432	ENSBTAG00000049649	-	92	63.432	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	50	65.217	ENSBTAG00000051119	-	98	65.217	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	60	63.655	ENSBTAG00000054175	-	91	63.655	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	69	63.163	ENSBTAG00000051842	-	92	63.375	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	54	65.480	ENSBTAG00000055052	-	99	65.480	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	69	63.252	ENSBTAG00000050912	-	92	63.252	Bos_taurus
ENSRNOG00000054519	AABR07053179.1	52	66.029	ENSCHIG00000008419	-	90	66.029	Capra_hircus
ENSRNOG00000054519	AABR07053179.1	50	66.209	ENSCHIG00000008599	-	90	66.209	Capra_hircus
ENSRNOG00000054519	AABR07053179.1	69	74.955	ENSCGRG00000019476	-	92	74.955	Cricetulus_griseus_crigri
ENSRNOG00000054519	AABR07053179.1	69	74.955	ENSCGRG00000019173	-	92	74.955	Cricetulus_griseus_crigri
ENSRNOG00000054519	AABR07053179.1	64	75.145	ENSCGRG00000019462	-	92	75.145	Cricetulus_griseus_crigri
ENSRNOG00000054519	AABR07053179.1	65	74.955	ENSCGRG00000018650	-	89	74.955	Cricetulus_griseus_crigri
ENSRNOG00000054519	AABR07053179.1	69	74.955	ENSCGRG00000018654	-	92	74.955	Cricetulus_griseus_crigri
ENSRNOG00000054519	AABR07053179.1	61	62.811	ENSOCUG00000029631	-	99	62.811	Oryctolagus_cuniculus
ENSRNOG00000054519	AABR07053179.1	61	64.438	ENSOCUG00000029721	-	91	64.438	Oryctolagus_cuniculus
ENSRNOG00000054519	AABR07053179.1	69	63.555	ENSOARG00000000057	-	92	63.555	Ovis_aries
ENSRNOG00000054519	AABR07053179.1	54	63.294	ENSOARG00000011096	-	84	63.294	Ovis_aries
ENSRNOG00000054519	AABR07053179.1	63	63.663	ENSOARG00000008210	-	89	63.663	Ovis_aries
ENSRNOG00000054519	AABR07053179.1	69	63.432	ENSOARG00000010889	-	92	63.645	Ovis_aries
ENSRNOG00000054519	AABR07053179.1	63	63.717	ENSOARG00000005813	-	92	63.717	Ovis_aries
ENSRNOG00000054519	AABR07053179.1	69	63.555	ENSOARG00000001175	-	92	63.555	Ovis_aries
ENSRNOG00000054519	AABR07053179.1	65	63.759	ENSSSCG00000036442	-	95	63.759	Sus_scrofa
ENSRNOG00000054519	AABR07053179.1	52	65.045	ENSSSCG00000035697	-	91	65.006	Sus_scrofa
ENSRNOG00000054519	AABR07053179.1	51	66.502	ENSSSCG00000040911	-	88	66.502	Sus_scrofa
ENSRNOG00000054519	AABR07053179.1	69	63.939	ENSSSCG00000039414	-	92	63.939	Sus_scrofa
ENSRNOG00000054519	AABR07053179.1	68	65.574	ENSSSCG00000040939	-	92	65.574	Sus_scrofa