EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000054557 (Gene tree)
Gene ID: 100362102
Gene Symbol: Lsm14b
Alias: LOC499950|RGD1563798
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 8982 bases
Position: chr3:175408629-175417610
Accession: 1563798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071227	FDF	PF09532.10	5.6e-25	1	1
ENSRNOP00000071227	SM-ATX	PF14438.6	5.8e-08	1	1
ENSRNOP00000071227	LSM14	PF12701.7	8.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000081344	-	1319	XM_002729258	ENSRNOP00000071227	424 (aa)	XP_002729304	A0A0G2JZY0

Gene Model

Click here to download ENSRNOG00000054557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054557	Lsm14b	96	47.548	ENSRNOG00000021133	Lsm14a	86	51.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054557	Lsm14b	100	85.849	ENSG00000149657	LSM14B	100	90.726	Homo_sapiens
ENSRNOG00000054557	Lsm14b	91	50.251	ENSAPOG00000001780	lsm14b	92	50.620	Acanthochromis_polyacanthus
ENSRNOG00000054557	Lsm14b	99	91.489	ENSAMEG00000013430	LSM14B	100	91.489	Ailuropoda_melanoleuca
ENSRNOG00000054557	Lsm14b	91	48.724	ENSACIG00000012266	lsm14b	91	48.284	Amphilophus_citrinellus
ENSRNOG00000054557	Lsm14b	98	43.925	ENSAOCG00000006667	LSM14B	90	44.444	Amphiprion_ocellaris
ENSRNOG00000054557	Lsm14b	91	49.749	ENSAOCG00000012380	lsm14b	92	50.124	Amphiprion_ocellaris
ENSRNOG00000054557	Lsm14b	91	44.552	ENSAPEG00000023633	lsm14b	92	46.173	Amphiprion_percula
ENSRNOG00000054557	Lsm14b	91	48.990	ENSATEG00000016603	lsm14b	92	48.995	Anabas_testudineus
ENSRNOG00000054557	Lsm14b	71	39.935	ENSATEG00000015895	LSM14B	89	37.908	Anabas_testudineus
ENSRNOG00000054557	Lsm14b	92	83.673	ENSAPLG00000013203	LSM14B	100	83.673	Anas_platyrhynchos
ENSRNOG00000054557	Lsm14b	99	73.821	ENSACAG00000016195	LSM14B	99	73.821	Anolis_carolinensis
ENSRNOG00000054557	Lsm14b	100	92.689	ENSANAG00000037915	LSM14B	100	92.689	Aotus_nancymaae
ENSRNOG00000054557	Lsm14b	90	46.078	ENSACLG00000019663	lsm14b	92	49.257	Astatotilapia_calliptera
ENSRNOG00000054557	Lsm14b	91	54.364	ENSAMXG00000002865	lsm14b	99	55.479	Astyanax_mexicanus
ENSRNOG00000054557	Lsm14b	100	89.623	ENSBTAG00000021558	LSM14B	100	89.623	Bos_taurus
ENSRNOG00000054557	Lsm14b	100	93.160	ENSCJAG00000014434	LSM14B	100	93.160	Callithrix_jacchus
ENSRNOG00000054557	Lsm14b	91	91.146	ENSCAFG00000012518	LSM14B	98	91.146	Canis_familiaris
ENSRNOG00000054557	Lsm14b	100	92.217	ENSCAFG00020022150	LSM14B	100	92.217	Canis_lupus_dingo
ENSRNOG00000054557	Lsm14b	99	60.382	ENSCHIG00000022681	-	100	60.382	Capra_hircus
ENSRNOG00000054557	Lsm14b	100	91.038	ENSCHIG00000010284	-	100	91.038	Capra_hircus
ENSRNOG00000054557	Lsm14b	90	83.465	ENSTSYG00000031914	LSM14B	89	83.465	Carlito_syrichta
ENSRNOG00000054557	Lsm14b	90	82.984	ENSCAPG00000013059	LSM14B	100	91.475	Cavia_aperea
ENSRNOG00000054557	Lsm14b	90	83.202	ENSCPOG00000038080	LSM14B	100	91.803	Cavia_porcellus
ENSRNOG00000054557	Lsm14b	100	84.670	ENSCCAG00000021267	LSM14B	100	84.670	Cebus_capucinus
ENSRNOG00000054557	Lsm14b	100	69.340	ENSCCAG00000024900	-	99	76.623	Cebus_capucinus
ENSRNOG00000054557	Lsm14b	100	93.632	ENSCATG00000036006	LSM14B	100	93.632	Cercocebus_atys
ENSRNOG00000054557	Lsm14b	90	83.465	ENSCLAG00000003186	LSM14B	100	92.131	Chinchilla_lanigera
ENSRNOG00000054557	Lsm14b	100	93.868	ENSCSAG00000015729	LSM14B	100	93.868	Chlorocebus_sabaeus
ENSRNOG00000054557	Lsm14b	71	63.576	ENSCHOG00000006997	-	100	65.563	Choloepus_hoffmanni
ENSRNOG00000054557	Lsm14b	99	84.870	ENSCPBG00000027065	LSM14B	99	84.870	Chrysemys_picta_bellii
ENSRNOG00000054557	Lsm14b	90	83.727	ENSCANG00000036986	LSM14B	100	83.727	Colobus_angolensis_palliatus
ENSRNOG00000054557	Lsm14b	100	88.443	ENSCGRG00001018399	Lsm14b	100	96.721	Cricetulus_griseus_chok1gshd
ENSRNOG00000054557	Lsm14b	70	96.644	ENSCGRG00000006111	-	100	96.644	Cricetulus_griseus_crigri
ENSRNOG00000054557	Lsm14b	57	86.420	ENSCGRG00000002484	-	100	86.420	Cricetulus_griseus_crigri
ENSRNOG00000054557	Lsm14b	92	46.883	ENSCSEG00000004722	lsm14b	93	46.651	Cynoglossus_semilaevis
ENSRNOG00000054557	Lsm14b	96	43.026	ENSCSEG00000020669	LSM14B	92	42.754	Cynoglossus_semilaevis
ENSRNOG00000054557	Lsm14b	68	31.973	ENSCVAG00000012433	-	88	31.295	Cyprinodon_variegatus
ENSRNOG00000054557	Lsm14b	99	49.884	ENSDARG00000025386	lsm14b	99	49.074	Danio_rerio
ENSRNOG00000054557	Lsm14b	72	87.541	ENSDNOG00000025246	LSM14B	100	87.541	Dasypus_novemcinctus
ENSRNOG00000054557	Lsm14b	91	82.292	ENSDORG00000016683	Lsm14b	100	90.820	Dipodomys_ordii
ENSRNOG00000054557	Lsm14b	61	71.538	ENSETEG00000011188	-	100	71.852	Echinops_telfairi
ENSRNOG00000054557	Lsm14b	99	66.430	ENSETEG00000001869	-	100	64.775	Echinops_telfairi
ENSRNOG00000054557	Lsm14b	72	90.492	ENSEASG00005023218	LSM14B	100	90.492	Equus_asinus_asinus
ENSRNOG00000054557	Lsm14b	100	92.453	ENSECAG00000010659	LSM14B	100	92.453	Equus_caballus
ENSRNOG00000054557	Lsm14b	54	93.939	ENSEEUG00000007331	LSM14B	80	93.939	Erinaceus_europaeus
ENSRNOG00000054557	Lsm14b	91	47.761	ENSELUG00000016299	LSM14B	99	48.853	Esox_lucius
ENSRNOG00000054557	Lsm14b	96	52.644	ENSELUG00000005780	lsm14b	92	53.788	Esox_lucius
ENSRNOG00000054557	Lsm14b	100	84.198	ENSFCAG00000003248	LSM14B	100	84.198	Felis_catus
ENSRNOG00000054557	Lsm14b	91	85.013	ENSFALG00000010618	LSM14B	100	85.013	Ficedula_albicollis
ENSRNOG00000054557	Lsm14b	90	83.202	ENSFDAG00000002214	LSM14B	100	91.803	Fukomys_damarensis
ENSRNOG00000054557	Lsm14b	100	46.171	ENSFHEG00000006237	lsm14b	100	46.396	Fundulus_heteroclitus
ENSRNOG00000054557	Lsm14b	76	37.255	ENSFHEG00000003362	LSM14B	81	40.650	Fundulus_heteroclitus
ENSRNOG00000054557	Lsm14b	100	48.122	ENSGMOG00000017115	lsm14b	99	46.714	Gadus_morhua
ENSRNOG00000054557	Lsm14b	99	84.778	ENSGALG00000005125	LSM14B	99	85.714	Gallus_gallus
ENSRNOG00000054557	Lsm14b	70	69.930	ENSGAFG00000020318	lsm14b	75	69.930	Gambusia_affinis
ENSRNOG00000054557	Lsm14b	69	35.495	ENSGAFG00000013723	LSM14B	87	34.066	Gambusia_affinis
ENSRNOG00000054557	Lsm14b	92	48.861	ENSGACG00000009973	lsm14b	92	48.861	Gasterosteus_aculeatus
ENSRNOG00000054557	Lsm14b	67	69.718	ENSGAGG00000004106	LSM14B	94	79.184	Gopherus_agassizii
ENSRNOG00000054557	Lsm14b	91	83.204	ENSGGOG00000005630	LSM14B	100	92.459	Gorilla_gorilla
ENSRNOG00000054557	Lsm14b	100	84.670	ENSHGLG00000015055	LSM14B	100	91.475	Heterocephalus_glaber_female
ENSRNOG00000054557	Lsm14b	90	81.102	ENSHGLG00100015273	LSM14B	100	91.391	Heterocephalus_glaber_male
ENSRNOG00000054557	Lsm14b	96	45.803	ENSHCOG00000018747	LSM14B	92	45.522	Hippocampus_comes
ENSRNOG00000054557	Lsm14b	63	38.889	ENSHCOG00000004867	lsm14b	86	38.321	Hippocampus_comes
ENSRNOG00000054557	Lsm14b	91	54.337	ENSIPUG00000014946	lsm14b	95	54.545	Ictalurus_punctatus
ENSRNOG00000054557	Lsm14b	90	84.514	ENSSTOG00000020482	LSM14B	100	93.443	Ictidomys_tridecemlineatus
ENSRNOG00000054557	Lsm14b	99	86.396	ENSJJAG00000012728	Lsm14b	100	94.098	Jaculus_jaculus
ENSRNOG00000054557	Lsm14b	91	48.130	ENSKMAG00000017524	lsm14b	93	48.768	Kryptolebias_marmoratus
ENSRNOG00000054557	Lsm14b	99	71.294	ENSLACG00000003849	LSM14B	99	71.529	Latimeria_chalumnae
ENSRNOG00000054557	Lsm14b	99	57.275	ENSLOCG00000003746	lsm14b	99	57.442	Lepisosteus_oculatus
ENSRNOG00000054557	Lsm14b	91	78.961	ENSLAFG00000007492	LSM14B	100	78.961	Loxodonta_africana
ENSRNOG00000054557	Lsm14b	100	94.104	ENSMFAG00000041479	LSM14B	100	94.104	Macaca_fascicularis
ENSRNOG00000054557	Lsm14b	100	85.613	ENSMMUG00000014084	LSM14B	100	85.613	Macaca_mulatta
ENSRNOG00000054557	Lsm14b	100	85.613	ENSMNEG00000045573	LSM14B	100	85.613	Macaca_nemestrina
ENSRNOG00000054557	Lsm14b	90	83.465	ENSMLEG00000040895	LSM14B	100	83.465	Mandrillus_leucophaeus
ENSRNOG00000054557	Lsm14b	91	48.241	ENSMAMG00000020539	lsm14b	92	48.635	Mastacembelus_armatus
ENSRNOG00000054557	Lsm14b	99	45.455	ENSMAMG00000024124	LSM14B	91	45.844	Mastacembelus_armatus
ENSRNOG00000054557	Lsm14b	92	42.959	ENSMZEG00005026001	LSM14B	94	44.554	Maylandia_zebra
ENSRNOG00000054557	Lsm14b	90	45.588	ENSMZEG00005000987	lsm14b	92	48.762	Maylandia_zebra
ENSRNOG00000054557	Lsm14b	92	72.222	ENSMGAG00000005300	LSM14B	100	73.232	Meleagris_gallopavo
ENSRNOG00000054557	Lsm14b	100	87.500	ENSMAUG00000020700	Lsm14b	100	96.066	Mesocricetus_auratus
ENSRNOG00000054557	Lsm14b	100	93.632	ENSMICG00000014675	LSM14B	100	93.632	Microcebus_murinus
ENSRNOG00000054557	Lsm14b	100	87.500	ENSMOCG00000020600	Lsm14b	100	95.410	Microtus_ochrogaster
ENSRNOG00000054557	Lsm14b	65	80.727	ENSMOCG00000005119	-	93	80.586	Microtus_ochrogaster
ENSRNOG00000054557	Lsm14b	91	46.517	ENSMMOG00000020042	lsm14b	95	48.768	Mola_mola
ENSRNOG00000054557	Lsm14b	92	45.137	ENSMMOG00000017321	LSM14B	91	45.137	Mola_mola
ENSRNOG00000054557	Lsm14b	72	85.902	ENSMODG00000016690	LSM14B	100	85.902	Monodelphis_domestica
ENSRNOG00000054557	Lsm14b	92	44.743	ENSMALG00000022251	LSM14B	92	44.581	Monopterus_albus
ENSRNOG00000054557	Lsm14b	95	48.387	ENSMALG00000004783	lsm14b	92	48.718	Monopterus_albus
ENSRNOG00000054557	Lsm14b	100	98.349	MGP_CAROLIEiJ_G0024770	Lsm14b	100	98.349	Mus_caroli
ENSRNOG00000054557	Lsm14b	100	89.387	ENSMUSG00000039108	Lsm14b	100	98.361	Mus_musculus
ENSRNOG00000054557	Lsm14b	100	98.113	MGP_PahariEiJ_G0026214	Lsm14b	100	98.113	Mus_pahari
ENSRNOG00000054557	Lsm14b	100	98.585	MGP_SPRETEiJ_G0025693	Lsm14b	100	98.585	Mus_spretus
ENSRNOG00000054557	Lsm14b	95	87.097	ENSMPUG00000007584	LSM14B	100	87.097	Mustela_putorius_furo
ENSRNOG00000054557	Lsm14b	100	82.118	ENSMLUG00000000304	LSM14B	100	82.118	Myotis_lucifugus
ENSRNOG00000054557	Lsm14b	54	90.476	ENSNGAG00000016550	Lsm14b	100	90.476	Nannospalax_galili
ENSRNOG00000054557	Lsm14b	90	83.465	ENSNLEG00000015757	LSM14B	100	83.465	Nomascus_leucogenys
ENSRNOG00000054557	Lsm14b	72	95.395	ENSMEUG00000008267	-	77	97.260	Notamacropus_eugenii
ENSRNOG00000054557	Lsm14b	100	85.613	ENSODEG00000004099	LSM14B	100	92.787	Octodon_degus
ENSRNOG00000054557	Lsm14b	90	46.829	ENSONIG00000020318	lsm14b	92	50.493	Oreochromis_niloticus
ENSRNOG00000054557	Lsm14b	75	72.965	ENSOANG00000003370	LSM14B	99	72.965	Ornithorhynchus_anatinus
ENSRNOG00000054557	Lsm14b	90	80.940	ENSOCUG00000006279	LSM14B	100	80.940	Oryctolagus_cuniculus
ENSRNOG00000054557	Lsm14b	91	46.134	ENSORLG00000013525	lsm14b	92	48.346	Oryzias_latipes
ENSRNOG00000054557	Lsm14b	93	42.579	ENSORLG00000028353	LSM14B	91	41.439	Oryzias_latipes
ENSRNOG00000054557	Lsm14b	65	33.574	ENSORLG00020018191	-	85	34.444	Oryzias_latipes_hni
ENSRNOG00000054557	Lsm14b	91	46.134	ENSORLG00020020553	lsm14b	92	48.346	Oryzias_latipes_hni
ENSRNOG00000054557	Lsm14b	91	46.134	ENSORLG00015016862	lsm14b	92	48.346	Oryzias_latipes_hsok
ENSRNOG00000054557	Lsm14b	93	42.439	ENSORLG00015013157	LSM14B	91	41.294	Oryzias_latipes_hsok
ENSRNOG00000054557	Lsm14b	91	45.477	ENSOMEG00000023917	lsm14b	92	47.643	Oryzias_melastigma
ENSRNOG00000054557	Lsm14b	100	93.868	ENSOGAG00000003915	LSM14B	100	93.868	Otolemur_garnettii
ENSRNOG00000054557	Lsm14b	91	89.091	ENSOARG00000014706	LSM14B	98	89.791	Ovis_aries
ENSRNOG00000054557	Lsm14b	91	83.204	ENSPPAG00000035799	LSM14B	95	83.204	Pan_paniscus
ENSRNOG00000054557	Lsm14b	100	84.198	ENSPPRG00000009197	LSM14B	100	84.198	Panthera_pardus
ENSRNOG00000054557	Lsm14b	70	90.203	ENSPTIG00000021518	LSM14B	100	90.203	Panthera_tigris_altaica
ENSRNOG00000054557	Lsm14b	100	85.849	ENSPTRG00000013696	LSM14B	100	85.849	Pan_troglodytes
ENSRNOG00000054557	Lsm14b	100	85.377	ENSPANG00000011747	LSM14B	100	85.377	Papio_anubis
ENSRNOG00000054557	Lsm14b	99	55.687	ENSPKIG00000003275	lsm14b	94	84.158	Paramormyrops_kingsleyae
ENSRNOG00000054557	Lsm14b	91	74.805	ENSPSIG00000014762	LSM14B	100	80.065	Pelodiscus_sinensis
ENSRNOG00000054557	Lsm14b	99	88.571	ENSPEMG00000017688	Lsm14b	100	96.721	Peromyscus_maniculatus_bairdii
ENSRNOG00000054557	Lsm14b	100	80.896	ENSPCIG00000013405	LSM14B	100	80.896	Phascolarctos_cinereus
ENSRNOG00000054557	Lsm14b	100	47.005	ENSPFOG00000005631	lsm14b	92	47.015	Poecilia_formosa
ENSRNOG00000054557	Lsm14b	91	42.857	ENSPLAG00000005793	LSM14B	91	42.065	Poecilia_latipinna
ENSRNOG00000054557	Lsm14b	100	46.544	ENSPLAG00000002449	lsm14b	92	46.517	Poecilia_latipinna
ENSRNOG00000054557	Lsm14b	90	41.985	ENSPMEG00000022953	LSM14B	91	41.895	Poecilia_mexicana
ENSRNOG00000054557	Lsm14b	100	46.083	ENSPMEG00000000745	lsm14b	92	46.020	Poecilia_mexicana
ENSRNOG00000054557	Lsm14b	65	38.351	ENSPREG00000007828	LSM14B	87	37.011	Poecilia_reticulata
ENSRNOG00000054557	Lsm14b	100	79.953	ENSPPYG00000011194	LSM14B	100	78.066	Pongo_abelii
ENSRNOG00000054557	Lsm14b	100	85.613	ENSPCOG00000013625	LSM14B	100	85.613	Propithecus_coquereli
ENSRNOG00000054557	Lsm14b	82	69.452	ENSPVAG00000017918	LSM14B	100	69.452	Pteropus_vampyrus
ENSRNOG00000054557	Lsm14b	99	54.884	ENSPNAG00000012777	lsm14b	99	55.581	Pygocentrus_nattereri
ENSRNOG00000054557	Lsm14b	90	92.932	ENSRBIG00000033461	LSM14B	99	92.932	Rhinopithecus_bieti
ENSRNOG00000054557	Lsm14b	92	84.278	ENSRROG00000042949	LSM14B	100	92.131	Rhinopithecus_roxellana
ENSRNOG00000054557	Lsm14b	90	82.677	ENSSBOG00000032820	LSM14B	100	85.981	Saimiri_boliviensis_boliviensis
ENSRNOG00000054557	Lsm14b	91	78.646	ENSSHAG00000015528	LSM14B	100	85.902	Sarcophilus_harrisii
ENSRNOG00000054557	Lsm14b	91	54.293	ENSSFOG00015004627	lsm14b	92	55.388	Scleropages_formosus
ENSRNOG00000054557	Lsm14b	91	49.750	ENSSMAG00000012725	lsm14b	92	50.123	Scophthalmus_maximus
ENSRNOG00000054557	Lsm14b	97	47.642	ENSSMAG00000000135	LSM14B	92	47.901	Scophthalmus_maximus
ENSRNOG00000054557	Lsm14b	92	47.525	ENSSDUG00000022770	LSM14B	92	47.382	Seriola_dumerili
ENSRNOG00000054557	Lsm14b	91	49.000	ENSSDUG00000020977	lsm14b	92	49.383	Seriola_dumerili
ENSRNOG00000054557	Lsm14b	65	37.234	ENSSLDG00000011354	-	89	40.780	Seriola_lalandi_dorsalis
ENSRNOG00000054557	Lsm14b	99	85.142	ENSSPUG00000014360	LSM14B	99	85.142	Sphenodon_punctatus
ENSRNOG00000054557	Lsm14b	68	37.931	ENSSPAG00000018854	-	88	36.131	Stegastes_partitus
ENSRNOG00000054557	Lsm14b	91	49.487	ENSSPAG00000020915	lsm14b	92	50.127	Stegastes_partitus
ENSRNOG00000054557	Lsm14b	100	90.566	ENSSSCG00000026052	LSM14B	100	88.197	Sus_scrofa
ENSRNOG00000054557	Lsm14b	91	75.711	ENSTGUG00000007884	LSM14B	100	75.711	Taeniopygia_guttata
ENSRNOG00000054557	Lsm14b	100	47.575	ENSTRUG00000011354	lsm14b	100	45.740	Takifugu_rubripes
ENSRNOG00000054557	Lsm14b	92	45.343	ENSTRUG00000001529	LSM14B	92	45.185	Takifugu_rubripes
ENSRNOG00000054557	Lsm14b	92	50.623	ENSTNIG00000002445	lsm14b	92	50.623	Tetraodon_nigroviridis
ENSRNOG00000054557	Lsm14b	85	100.000	ENSTTRG00000011043	LSM14B	100	65.094	Tursiops_truncatus
ENSRNOG00000054557	Lsm14b	98	86.538	ENSUAMG00000025298	LSM14B	99	86.538	Ursus_americanus
ENSRNOG00000054557	Lsm14b	98	86.538	ENSUMAG00000000480	LSM14B	99	86.538	Ursus_maritimus
ENSRNOG00000054557	Lsm14b	91	81.250	ENSVVUG00000015920	LSM14B	100	89.836	Vulpes_vulpes
ENSRNOG00000054557	Lsm14b	86	75.204	ENSXETG00000001997	lsm14b	99	75.749	Xenopus_tropicalis
ENSRNOG00000054557	Lsm14b	91	45.226	ENSXMAG00000010013	lsm14b	92	45.409	Xiphophorus_maculatus