EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000054561 (Gene tree)
Gene ID: 293052
Gene Symbol: Isg20
Alias: LOC293052|MGC105645
Full Name: interferon stimulated exonuclease gene 20
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 7156 bases
Position: chr1:140601791-140608946
Accession: 1306407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000075245	RNase_T	PF00929.24	8.6e-18	1	1
ENSRNOP00000069045	RNase_T	PF00929.24	5.2e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091588	-	804	-	ENSRNOP00000075245	185 (aa)	-	A0A0G2KA38
ENSRNOT00000085570	-	859	-	ENSRNOP00000069045	172 (aa)	-	A0A0G2JUC4

Gene Model

Click here to download ENSRNOG00000054561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054561	Isg20	90	55.769	ENSRNOG00000018421	Aen	51	54.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054561	Isg20	99	80.702	ENSG00000172183	ISG20	97	80.114	Homo_sapiens
ENSRNOG00000054561	Isg20	94	70.988	ENSAMEG00000012803	ISG20	100	69.143	Ailuropoda_melanoleuca
ENSRNOG00000054561	Isg20	90	50.641	ENSACIG00000012040	isg20	71	47.414	Amphilophus_citrinellus
ENSRNOG00000054561	Isg20	90	39.130	ENSACAG00000013905	-	60	39.157	Anolis_carolinensis
ENSRNOG00000054561	Isg20	94	69.753	ENSBTAG00000014762	ISG20	100	68.000	Bos_taurus
ENSRNOG00000054561	Isg20	99	78.947	ENSCJAG00000034923	ISG20	97	79.096	Callithrix_jacchus
ENSRNOG00000054561	Isg20	94	72.222	ENSCAFG00000011525	ISG20	98	71.429	Canis_familiaris
ENSRNOG00000054561	Isg20	94	72.222	ENSCAFG00020018837	ISG20	98	71.429	Canis_lupus_dingo
ENSRNOG00000054561	Isg20	94	69.753	ENSCHIG00000014526	ISG20	100	68.000	Capra_hircus
ENSRNOG00000054561	Isg20	99	74.854	ENSTSYG00000030528	ISG20	97	74.432	Carlito_syrichta
ENSRNOG00000054561	Isg20	99	73.099	ENSCAPG00000011672	ISG20	99	71.739	Cavia_aperea
ENSRNOG00000054561	Isg20	99	72.515	ENSCPOG00000036489	ISG20	99	71.196	Cavia_porcellus
ENSRNOG00000054561	Isg20	99	79.651	ENSCCAG00000025395	ISG20	97	79.096	Cebus_capucinus
ENSRNOG00000054561	Isg20	99	80.117	ENSCATG00000042494	ISG20	97	79.545	Cercocebus_atys
ENSRNOG00000054561	Isg20	97	73.494	ENSCLAG00000008100	ISG20	93	73.810	Chinchilla_lanigera
ENSRNOG00000054561	Isg20	99	80.702	ENSCSAG00000017194	ISG20	97	80.114	Chlorocebus_sabaeus
ENSRNOG00000054561	Isg20	90	38.994	ENSCING00000004431	-	80	39.375	Ciona_intestinalis
ENSRNOG00000054561	Isg20	99	80.702	ENSCANG00000032616	ISG20	97	80.114	Colobus_angolensis_palliatus
ENSRNOG00000054561	Isg20	99	83.237	ENSCGRG00001016300	-	99	81.720	Cricetulus_griseus_chok1gshd
ENSRNOG00000054561	Isg20	99	83.237	ENSCGRG00000000609	-	99	81.720	Cricetulus_griseus_crigri
ENSRNOG00000054561	Isg20	91	49.367	ENSCVAG00000009300	isg20	76	49.383	Cyprinodon_variegatus
ENSRNOG00000054561	Isg20	100	47.977	ENSDARG00000102266	isg20l2	54	48.000	Danio_rerio
ENSRNOG00000054561	Isg20	99	66.082	ENSDNOG00000049229	ISG20	98	65.537	Dasypus_novemcinctus
ENSRNOG00000054561	Isg20	99	47.674	ENSEBUG00000009658	-	84	47.701	Eptatretus_burgeri
ENSRNOG00000054561	Isg20	90	48.077	ENSEBUG00000010461	ISG20	56	48.734	Eptatretus_burgeri
ENSRNOG00000054561	Isg20	93	73.125	ENSEASG00005015360	ISG20	96	72.727	Equus_asinus_asinus
ENSRNOG00000054561	Isg20	93	73.125	ENSECAG00000019499	ISG20	96	72.727	Equus_caballus
ENSRNOG00000054561	Isg20	94	71.605	ENSFCAG00000005151	ISG20	99	70.588	Felis_catus
ENSRNOG00000054561	Isg20	99	72.515	ENSFDAG00000007444	ISG20	99	71.196	Fukomys_damarensis
ENSRNOG00000054561	Isg20	90	47.799	ENSFHEG00000018658	isg20	70	44.715	Fundulus_heteroclitus
ENSRNOG00000054561	Isg20	92	46.541	ENSGMOG00000001258	isg20	74	46.914	Gadus_morhua
ENSRNOG00000054561	Isg20	91	49.367	ENSGALG00000044204	ISG20	66	49.091	Gallus_gallus
ENSRNOG00000054561	Isg20	91	51.266	ENSGAFG00000005685	isg20	72	51.235	Gambusia_affinis
ENSRNOG00000054561	Isg20	90	49.359	ENSGACG00000007047	isg20	50	49.686	Gasterosteus_aculeatus
ENSRNOG00000054561	Isg20	91	56.329	ENSGAGG00000013542	ISG20	93	56.522	Gopherus_agassizii
ENSRNOG00000054561	Isg20	99	80.702	ENSGGOG00000010365	ISG20	97	80.114	Gorilla_gorilla
ENSRNOG00000054561	Isg20	99	74.269	ENSHGLG00000009077	ISG20	99	72.826	Heterocephalus_glaber_female
ENSRNOG00000054561	Isg20	99	74.269	ENSHGLG00100005004	ISG20	99	72.826	Heterocephalus_glaber_male
ENSRNOG00000054561	Isg20	90	48.077	ENSHCOG00000013913	isg20l2	82	43.709	Hippocampus_comes
ENSRNOG00000054561	Isg20	97	79.641	ENSSTOG00000020467	ISG20	97	78.333	Ictidomys_tridecemlineatus
ENSRNOG00000054561	Isg20	95	78.659	ENSJJAG00000010531	-	96	77.401	Jaculus_jaculus
ENSRNOG00000054561	Isg20	90	49.359	ENSLACG00000018339	-	56	50.000	Latimeria_chalumnae
ENSRNOG00000054561	Isg20	92	49.686	ENSLOCG00000014240	isg20	73	50.617	Lepisosteus_oculatus
ENSRNOG00000054561	Isg20	99	80.117	ENSMFAG00000032331	ISG20	97	79.545	Macaca_fascicularis
ENSRNOG00000054561	Isg20	99	80.117	ENSMMUG00000007669	ISG20	97	79.545	Macaca_mulatta
ENSRNOG00000054561	Isg20	99	80.117	ENSMNEG00000030310	ISG20	97	79.545	Macaca_nemestrina
ENSRNOG00000054561	Isg20	99	80.117	ENSMLEG00000038761	ISG20	97	79.545	Mandrillus_leucophaeus
ENSRNOG00000054561	Isg20	99	81.503	ENSMAUG00000015001	-	99	80.108	Mesocricetus_auratus
ENSRNOG00000054561	Isg20	94	75.309	ENSMICG00000027508	ISG20	99	74.405	Microcebus_murinus
ENSRNOG00000054561	Isg20	97	78.916	ENSMOCG00000005940	-	99	77.654	Microtus_ochrogaster
ENSRNOG00000054561	Isg20	90	45.342	ENSMMOG00000019013	isg20	98	48.421	Mola_mola
ENSRNOG00000054561	Isg20	93	65.000	ENSMODG00000019583	ISG20	97	63.006	Monodelphis_domestica
ENSRNOG00000054561	Isg20	99	91.813	MGP_CAROLIEiJ_G0029873	-	99	89.130	Mus_caroli
ENSRNOG00000054561	Isg20	99	92.398	ENSMUSG00000039236	Isg20	99	89.674	Mus_musculus
ENSRNOG00000054561	Isg20	99	91.228	MGP_PahariEiJ_G0013095	-	99	89.130	Mus_pahari
ENSRNOG00000054561	Isg20	99	91.813	MGP_SPRETEiJ_G0030975	-	99	89.130	Mus_spretus
ENSRNOG00000054561	Isg20	94	66.049	ENSMPUG00000015816	ISG20	97	66.265	Mustela_putorius_furo
ENSRNOG00000054561	Isg20	95	85.542	ENSNGAG00000019782	-	99	83.799	Nannospalax_galili
ENSRNOG00000054561	Isg20	95	79.141	ENSNLEG00000033379	ISG20	99	79.141	Nomascus_leucogenys
ENSRNOG00000054561	Isg20	99	71.345	ENSODEG00000015032	ISG20	96	71.676	Octodon_degus
ENSRNOG00000054561	Isg20	91	48.408	ENSONIG00000001534	isg20l2	88	48.765	Oreochromis_niloticus
ENSRNOG00000054561	Isg20	78	62.500	ENSOANG00000006380	ISG20	76	61.871	Ornithorhynchus_anatinus
ENSRNOG00000054561	Isg20	99	74.854	ENSOCUG00000023346	ISG20	99	73.913	Oryctolagus_cuniculus
ENSRNOG00000054561	Isg20	95	46.429	ENSORLG00000029585	isg20	81	46.512	Oryzias_latipes
ENSRNOG00000054561	Isg20	95	47.024	ENSORLG00015016089	isg20	74	47.191	Oryzias_latipes_hsok
ENSRNOG00000054561	Isg20	96	45.562	ENSOMEG00000003990	isg20	95	45.665	Oryzias_melastigma
ENSRNOG00000054561	Isg20	94	76.543	ENSOGAG00000004742	ISG20	98	75.595	Otolemur_garnettii
ENSRNOG00000054561	Isg20	95	61.212	ENSOARG00000010964	ISG20	92	61.310	Ovis_aries
ENSRNOG00000054561	Isg20	99	79.532	ENSPPAG00000028868	ISG20	97	78.977	Pan_paniscus
ENSRNOG00000054561	Isg20	94	72.840	ENSPPRG00000023560	ISG20	99	71.765	Panthera_pardus
ENSRNOG00000054561	Isg20	75	74.419	ENSPTIG00000018498	ISG20	70	72.993	Panthera_tigris_altaica
ENSRNOG00000054561	Isg20	99	80.702	ENSPTRG00000044668	ISG20	97	80.114	Pan_troglodytes
ENSRNOG00000054561	Isg20	99	79.532	ENSPANG00000034658	ISG20	97	78.977	Papio_anubis
ENSRNOG00000054561	Isg20	91	47.468	ENSPMGG00000021232	isg20	79	47.531	Periophthalmus_magnuspinnatus
ENSRNOG00000054561	Isg20	99	82.081	ENSPEMG00000020302	-	99	80.645	Peromyscus_maniculatus_bairdii
ENSRNOG00000054561	Isg20	91	47.468	ENSPMAG00000000577	isg20	87	47.170	Petromyzon_marinus
ENSRNOG00000054561	Isg20	92	49.057	ENSPMAG00000001569	ISG20	88	49.689	Petromyzon_marinus
ENSRNOG00000054561	Isg20	94	65.839	ENSPCIG00000006405	ISG20	88	64.848	Phascolarctos_cinereus
ENSRNOG00000054561	Isg20	91	51.266	ENSPFOG00000003318	isg20	51	49.708	Poecilia_formosa
ENSRNOG00000054561	Isg20	91	51.266	ENSPLAG00000005932	isg20	78	50.649	Poecilia_latipinna
ENSRNOG00000054561	Isg20	91	51.266	ENSPMEG00000016899	isg20	75	50.000	Poecilia_mexicana
ENSRNOG00000054561	Isg20	60	52.885	ENSPREG00000005954	isg20	64	48.921	Poecilia_reticulata
ENSRNOG00000054561	Isg20	99	81.287	ENSPPYG00000006756	ISG20	97	80.682	Pongo_abelii
ENSRNOG00000054561	Isg20	93	75.000	ENSPCOG00000015727	ISG20	93	75.309	Propithecus_coquereli
ENSRNOG00000054561	Isg20	99	80.702	ENSRBIG00000041506	ISG20	97	80.114	Rhinopithecus_bieti
ENSRNOG00000054561	Isg20	99	80.702	ENSRROG00000043326	ISG20	97	80.114	Rhinopithecus_roxellana
ENSRNOG00000054561	Isg20	99	77.778	ENSSBOG00000031539	ISG20	97	77.273	Saimiri_boliviensis_boliviensis
ENSRNOG00000054561	Isg20	94	66.049	ENSSHAG00000017049	ISG20	96	65.455	Sarcophilus_harrisii
ENSRNOG00000054561	Isg20	90	48.718	ENSSMAG00000004520	isg20	50	49.057	Scophthalmus_maximus
ENSRNOG00000054561	Isg20	91	60.759	ENSSPUG00000012061	ISG20	93	60.870	Sphenodon_punctatus
ENSRNOG00000054561	Isg20	94	73.457	ENSSSCG00000024867	ISG20	98	72.619	Sus_scrofa
ENSRNOG00000054561	Isg20	88	53.289	ENSTNIG00000010389	isg20	75	53.289	Tetraodon_nigroviridis
ENSRNOG00000054561	Isg20	78	71.642	ENSUAMG00000019065	ISG20	96	69.388	Ursus_americanus
ENSRNOG00000054561	Isg20	94	71.605	ENSVVUG00000012013	ISG20	98	70.833	Vulpes_vulpes
ENSRNOG00000054561	Isg20	91	51.899	ENSXETG00000007588	aen	62	53.165	Xenopus_tropicalis
ENSRNOG00000054561	Isg20	91	51.266	ENSXMAG00000013066	isg20	54	49.708	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000175	3'-5'-exoribonuclease activity	-	IEA	Function
GO:0000175	3'-5'-exoribonuclease activity	-	ISO	Function
GO:0000738	DNA catabolic process, exonucleolytic	-	IEA	Process
GO:0000738	DNA catabolic process, exonucleolytic	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004527	exonuclease activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006401	RNA catabolic process	-	IEA	Process
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity	-	IEA	Function
GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity	-	ISO	Function
GO:0009615	response to virus	-	ISO	Process
GO:0015030	Cajal body	-	IEA	Component
GO:0015030	Cajal body	-	ISO	Component
GO:0016605	PML body	-	IEA	Component
GO:0016605	PML body	-	ISO	Component
GO:0030619	U1 snRNA binding	-	IEA	Function
GO:0030619	U1 snRNA binding	-	ISO	Function
GO:0030620	U2 snRNA binding	-	IEA	Function
GO:0030620	U2 snRNA binding	-	ISO	Function
GO:0034511	U3 snoRNA binding	-	IEA	Function
GO:0034511	U3 snoRNA binding	-	ISO	Function
GO:0045071	negative regulation of viral genome replication	-	IEA	Process
GO:0045071	negative regulation of viral genome replication	-	ISO	Process
GO:0051607	defense response to virus	-	IEA	Process
GO:0051607	defense response to virus	-	ISO	Process
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	-	IEA	Process