EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000054775 (Gene tree)
Gene ID: 300211
Gene Symbol: Arf3
Alias: LOC300211
Full Name: ADP-ribosylation factor 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 39269 bases
Position: chr7:140398199-140437467
Accession: 621273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069384	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSRNOP00000069538	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSRNOP00000075002	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000087181	-	999	-	ENSRNOP00000075002	187 (aa)	-	A0A0G2K9H8
ENSRNOT00000077884	-	3285	XM_006257320	ENSRNOP00000069538	181 (aa)	XP_006257382	P61206
ENSRNOT00000087176	-	583	-	ENSRNOP00000069384	181 (aa)	-	A0A0G2JV81
ENSRNOT00000083955	-	717	XM_006257344	ENSRNOP00000072158	201 (aa)	XP_006257406	G3V7V5

Gene Model

Click here to download ENSRNOG00000054775's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054775	Arf3	100	96.133	ENSRNOG00000060229	Arf1	100	96.133
ENSRNOG00000054775	Arf3	91	43.114	ENSRNOG00000049827	Arl14	87	43.114
ENSRNOG00000054775	Arf3	92	58.434	ENSRNOG00000005763	Arl1	100	56.906
ENSRNOG00000054775	Arf3	98	48.876	ENSRNOG00000006839	Arl5a	99	48.876
ENSRNOG00000054775	Arf3	92	48.193	ENSRNOG00000019973	Arl3	90	47.305
ENSRNOG00000054775	Arf3	96	33.333	ENSRNOG00000013992	Arfrp1	92	32.979
ENSRNOG00000054775	Arf3	100	94.475	ENSRNOG00000004807	Arf2	100	94.475
ENSRNOG00000054775	Arf3	100	42.632	ENSRNOG00000004282	Arl4a	96	42.408
ENSRNOG00000054775	Arf3	96	31.609	ENSRNOG00000055860	Arl8b	94	31.609
ENSRNOG00000054775	Arf3	96	41.899	ENSRNOG00000001689	Arl6	96	41.899
ENSRNOG00000054775	Arf3	89	41.358	ENSRNOG00000014653	Arl11	94	41.358
ENSRNOG00000054775	Arf3	92	46.386	ENSRNOG00000021010	Arl2	95	46.386
ENSRNOG00000054775	Arf3	98	50.847	ENSRNOG00000018714	Arl5b	98	50.847
ENSRNOG00000054775	Arf3	92	44.509	ENSRNOG00000020770	Arl4d	86	44.509
ENSRNOG00000054775	Arf3	97	43.750	ENSRNOG00000036880	Arl5c	98	43.750
ENSRNOG00000054775	Arf3	100	30.270	ENSRNOG00000005988	Arl8a	99	30.435
ENSRNOG00000054775	Arf3	99	78.889	ENSRNOG00000007806	Arf5	100	78.889
ENSRNOG00000054775	Arf3	85	33.974	ENSRNOG00000045948	Arl10	80	33.974
ENSRNOG00000054775	Arf3	100	99.448	ENSRNOG00000057515	AABR07046136.1	100	99.448

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	-	ISO	Process
GO:0006893	Golgi to plasma membrane transport	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0070382	exocytic vesicle	-	ISO	Component
GO:0000413	protein peptidyl-prolyl isomerization	-	IEA	Process
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0016021	integral component of membrane	-	IEA	Component