EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000054806 (Gene tree)
Gene ID: 108348323
Gene Symbol: LOC108348323
Alias: LOC103694901
Full Name: cyclin-dependent kinase-like 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 83820 bases
Position: chrAABR07024291.1:20667-104486
Accession: 11405961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000068841	RIO1	PF01163.22	0.0002	1	1
ENSRNOP00000073449	RIO1	PF01163.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000085895	-	2186	XM_008773888	ENSRNOP00000073449	634 (aa)	XP_008772110	A0A0G2K5J4
ENSRNOT00000087152	-	1779	XM_008773883	ENSRNOP00000068841	593 (aa)	XP_008772105	Q9JM01

Gene Model

Click here to download ENSRNOG00000054806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054806	LOC108348323	99	98.302	ENSRNOG00000059485	Cdkl3	97	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054806	LOC108348323	50	92.177	ENSCLAG00000013562	CDKL3	100	93.750	Chinchilla_lanigera
ENSRNOG00000054806	LOC108348323	77	90.810	ENSCGRG00001024159	Cdkl3	92	98.639	Cricetulus_griseus_chok1gshd
ENSRNOG00000054806	LOC108348323	97	90.418	ENSCGRG00000008921	Cdkl3	100	98.958	Cricetulus_griseus_crigri
ENSRNOG00000054806	LOC108348323	99	80.372	ENSFCAG00000024742	CDKL3	99	80.880	Felis_catus
ENSRNOG00000054806	LOC108348323	99	81.895	ENSLAFG00000011468	CDKL3	97	83.189	Loxodonta_africana
ENSRNOG00000054806	LOC108348323	91	82.873	ENSMICG00000004579	CDKL3	96	82.873	Microcebus_murinus
ENSRNOG00000054806	LOC108348323	100	93.802	MGP_CAROLIEiJ_G0016322	Cdkl3	100	99.479	Mus_caroli
ENSRNOG00000054806	LOC108348323	99	93.379	ENSMUSG00000020389	Cdkl3	100	99.479	Mus_musculus
ENSRNOG00000054806	LOC108348323	100	94.305	MGP_PahariEiJ_G0017457	Cdkl3	100	99.479	Mus_pahari
ENSRNOG00000054806	LOC108348323	99	93.209	MGP_SPRETEiJ_G0017166	Cdkl3	100	99.479	Mus_spretus
ENSRNOG00000054806	LOC108348323	97	83.362	ENSMPUG00000010119	CDKL3	97	83.362	Mustela_putorius_furo
ENSRNOG00000054806	LOC108348323	99	78.814	ENSMLUG00000012902	CDKL3	97	80.035	Myotis_lucifugus
ENSRNOG00000054806	LOC108348323	83	71.774	ENSOANG00000000233	CDKL3	100	73.185	Ornithorhynchus_anatinus
ENSRNOG00000054806	LOC108348323	99	81.895	ENSPPRG00000005837	CDKL3	99	85.872	Panthera_pardus
ENSRNOG00000054806	LOC108348323	99	81.726	ENSPTIG00000019406	CDKL3	99	84.507	Panthera_tigris_altaica
ENSRNOG00000054806	LOC108348323	91	83.579	ENSPVAG00000012429	CDKL3	91	83.579	Pteropus_vampyrus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0006468	protein phosphorylation	-	IEA	Process