EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000054871 (Gene tree)
Gene ID: 103694865
Gene Symbol: LOC103694865
Alias: -
Full Name: TATA-binding protein-associated factor 2N-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 30443 bases
Position: chrKL568414.1:83509-113951
Accession: 9277142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069984	zf-RanBP	PF00641.18	7.5e-07	1	1
ENSRNOP00000069984	RRM_1	PF00076.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090259	-	1776	XM_008773813	ENSRNOP00000069984	560 (aa)	XP_008772036	A0A0G2JWR5

Gene Model

Click here to download ENSRNOG00000054871's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03022	Basal transcription factors	KEGG
rno05202	Transcriptional misregulation in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000054871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000054871	LOC103694865	100	100.000	ENSRNOG00000058393	Taf15	98	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000054871	LOC103694865	70	94.416	ENSG00000270647	TAF15	100	90.083	Homo_sapiens
ENSRNOG00000054871	LOC103694865	70	93.384	ENSAMEG00000014860	TAF15	68	93.367	Ailuropoda_melanoleuca
ENSRNOG00000054871	LOC103694865	70	69.037	ENSAPLG00000006217	TAF15	90	72.196	Anas_platyrhynchos
ENSRNOG00000054871	LOC103694865	70	95.178	ENSANAG00000020904	TAF15	71	91.858	Aotus_nancymaae
ENSRNOG00000054871	LOC103694865	70	95.685	ENSCJAG00000014961	TAF15	75	96.131	Callithrix_jacchus
ENSRNOG00000054871	LOC103694865	70	95.674	ENSCAFG00000018176	TAF15	69	95.663	Canis_familiaris
ENSRNOG00000054871	LOC103694865	70	95.674	ENSCAFG00020004027	TAF15	70	95.663	Canis_lupus_dingo
ENSRNOG00000054871	LOC103694865	54	91.419	ENSCHIG00000019985	-	77	91.391	Capra_hircus
ENSRNOG00000054871	LOC103694865	70	96.183	ENSTSYG00000003930	TAF15	68	96.173	Carlito_syrichta
ENSRNOG00000054871	LOC103694865	71	86.432	ENSCAPG00000002530	-	77	88.205	Cavia_aperea
ENSRNOG00000054871	LOC103694865	71	86.181	ENSCPOG00000010259	-	77	87.949	Cavia_porcellus
ENSRNOG00000054871	LOC103694865	70	87.563	ENSCCAG00000036025	TAF15	73	86.905	Cebus_capucinus
ENSRNOG00000054871	LOC103694865	70	95.685	ENSCATG00000044848	TAF15	75	96.131	Cercocebus_atys
ENSRNOG00000054871	LOC103694865	68	91.029	ENSCLAG00000008940	TAF15	67	94.920	Chinchilla_lanigera
ENSRNOG00000054871	LOC103694865	67	91.200	ENSCHOG00000002729	TAF15	60	91.176	Choloepus_hoffmanni
ENSRNOG00000054871	LOC103694865	69	72.569	ENSCPBG00000027820	TAF15	89	74.384	Chrysemys_picta_bellii
ENSRNOG00000054871	LOC103694865	54	93.729	ENSCANG00000042639	-	84	93.709	Colobus_angolensis_palliatus
ENSRNOG00000054871	LOC103694865	59	96.979	ENSCANG00000038846	-	84	96.979	Colobus_angolensis_palliatus
ENSRNOG00000054871	LOC103694865	70	91.071	ENSCGRG00001012011	Taf15	67	91.049	Cricetulus_griseus_chok1gshd
ENSRNOG00000054871	LOC103694865	99	94.643	ENSCGRG00000005110	Taf15	98	94.643	Cricetulus_griseus_crigri
ENSRNOG00000054871	LOC103694865	70	96.183	ENSDNOG00000006956	TAF15	73	96.173	Dasypus_novemcinctus
ENSRNOG00000054871	LOC103694865	70	87.500	ENSDORG00000014619	Taf15	68	85.166	Dipodomys_ordii
ENSRNOG00000054871	LOC103694865	64	94.413	ENSETEG00000001337	TAF15	64	94.413	Echinops_telfairi
ENSRNOG00000054871	LOC103694865	70	96.438	ENSEASG00005011235	TAF15	78	96.429	Equus_asinus_asinus
ENSRNOG00000054871	LOC103694865	70	96.438	ENSECAG00000000718	TAF15	65	96.429	Equus_caballus
ENSRNOG00000054871	LOC103694865	70	88.041	ENSFCAG00000018167	TAF15	76	93.750	Felis_catus
ENSRNOG00000054871	LOC103694865	69	72.208	ENSFALG00000009696	TAF15	90	76.733	Ficedula_albicollis
ENSRNOG00000054871	LOC103694865	77	90.233	ENSFDAG00000008577	TAF15	71	94.388	Fukomys_damarensis
ENSRNOG00000054871	LOC103694865	69	72.300	ENSGALG00000002060	TAF15	90	72.261	Gallus_gallus
ENSRNOG00000054871	LOC103694865	70	94.670	ENSGGOG00000005693	TAF15	75	95.536	Gorilla_gorilla
ENSRNOG00000054871	LOC103694865	70	74.555	ENSHGLG00000002551	-	84	71.684	Heterocephalus_glaber_female
ENSRNOG00000054871	LOC103694865	70	94.148	ENSHGLG00000005292	-	70	94.133	Heterocephalus_glaber_female
ENSRNOG00000054871	LOC103694865	67	94.180	ENSHGLG00100013953	-	69	94.164	Heterocephalus_glaber_male
ENSRNOG00000054871	LOC103694865	70	74.555	ENSHGLG00100002825	-	84	71.684	Heterocephalus_glaber_male
ENSRNOG00000054871	LOC103694865	70	96.692	ENSSTOG00000002081	TAF15	69	96.173	Ictidomys_tridecemlineatus
ENSRNOG00000054871	LOC103694865	70	94.103	ENSJJAG00000010606	Taf15	67	94.087	Jaculus_jaculus
ENSRNOG00000054871	LOC103694865	67	60.500	ENSLACG00000018479	-	91	57.619	Latimeria_chalumnae
ENSRNOG00000054871	LOC103694865	70	95.165	ENSLAFG00000018332	TAF15	67	95.153	Loxodonta_africana
ENSRNOG00000054871	LOC103694865	70	95.685	ENSMFAG00000041941	TAF15	67	95.674	Macaca_fascicularis
ENSRNOG00000054871	LOC103694865	70	91.603	ENSMMUG00000047590	-	62	91.582	Macaca_mulatta
ENSRNOG00000054871	LOC103694865	70	95.685	ENSMMUG00000047780	TAF15	67	95.674	Macaca_mulatta
ENSRNOG00000054871	LOC103694865	70	95.685	ENSMNEG00000044227	TAF15	75	96.131	Macaca_nemestrina
ENSRNOG00000054871	LOC103694865	70	95.685	ENSMLEG00000028534	TAF15	75	96.131	Mandrillus_leucophaeus
ENSRNOG00000054871	LOC103694865	69	69.585	ENSMGAG00000003842	TAF15	84	68.578	Meleagris_gallopavo
ENSRNOG00000054871	LOC103694865	70	95.165	ENSMICG00000017057	TAF15	67	95.153	Microcebus_murinus
ENSRNOG00000054871	LOC103694865	70	97.201	ENSMOCG00000015121	Taf15	70	97.194	Microtus_ochrogaster
ENSRNOG00000054871	LOC103694865	70	90.355	ENSMODG00000019123	TAF15	88	91.094	Monodelphis_domestica
ENSRNOG00000054871	LOC103694865	100	95.979	MGP_CAROLIEiJ_G0016876	Taf15	98	95.979	Mus_caroli
ENSRNOG00000054871	LOC103694865	70	98.980	ENSMUSG00000020680	Taf15	70	98.977	Mus_musculus
ENSRNOG00000054871	LOC103694865	70	98.469	MGP_PahariEiJ_G0018007	Taf15	58	100.000	Mus_pahari
ENSRNOG00000054871	LOC103694865	100	96.290	MGP_SPRETEiJ_G0017720	Taf15	98	96.290	Mus_spretus
ENSRNOG00000054871	LOC103694865	67	95.467	ENSMPUG00000014948	TAF15	85	95.467	Mustela_putorius_furo
ENSRNOG00000054871	LOC103694865	70	95.165	ENSMLUG00000002870	TAF15	76	95.153	Myotis_lucifugus
ENSRNOG00000054871	LOC103694865	70	91.327	ENSNGAG00000017633	-	66	90.537	Nannospalax_galili
ENSRNOG00000054871	LOC103694865	54	85.050	ENSNGAG00000019473	-	69	85.000	Nannospalax_galili
ENSRNOG00000054871	LOC103694865	53	96.667	ENSNLEG00000014063	TAF15	67	96.667	Nomascus_leucogenys
ENSRNOG00000054871	LOC103694865	57	88.158	ENSMEUG00000006009	-	54	90.351	Notamacropus_eugenii
ENSRNOG00000054871	LOC103694865	59	96.667	ENSODEG00000012915	-	75	96.667	Octodon_degus
ENSRNOG00000054871	LOC103694865	69	85.825	ENSODEG00000001772	-	74	85.271	Octodon_degus
ENSRNOG00000054871	LOC103694865	69	87.013	ENSODEG00000004747	-	76	87.234	Octodon_degus
ENSRNOG00000054871	LOC103694865	69	67.167	ENSOANG00000014273	TAF15	85	69.956	Ornithorhynchus_anatinus
ENSRNOG00000054871	LOC103694865	70	96.931	ENSOCUG00000002838	TAF15	98	92.919	Oryctolagus_cuniculus
ENSRNOG00000054871	LOC103694865	70	94.416	ENSOGAG00000011719	TAF15	67	94.388	Otolemur_garnettii
ENSRNOG00000054871	LOC103694865	76	88.811	ENSOARG00000005512	-	87	95.408	Ovis_aries
ENSRNOG00000054871	LOC103694865	70	92.621	ENSOARG00000000081	-	76	92.602	Ovis_aries
ENSRNOG00000054871	LOC103694865	60	95.536	ENSPPAG00000043510	-	75	95.536	Pan_paniscus
ENSRNOG00000054871	LOC103694865	59	97.305	ENSPTIG00000016445	TAF15	76	97.305	Panthera_tigris_altaica
ENSRNOG00000054871	LOC103694865	70	94.162	ENSPTRG00000009026	TAF15	75	95.536	Pan_troglodytes
ENSRNOG00000054871	LOC103694865	70	95.431	ENSPANG00000022930	TAF15	75	96.131	Papio_anubis
ENSRNOG00000054871	LOC103694865	69	71.216	ENSPSIG00000014222	TAF15	90	73.039	Pelodiscus_sinensis
ENSRNOG00000054871	LOC103694865	70	94.133	ENSPEMG00000018715	Taf15	67	94.118	Peromyscus_maniculatus_bairdii
ENSRNOG00000054871	LOC103694865	79	87.696	ENSPCIG00000003783	TAF15	71	92.366	Phascolarctos_cinereus
ENSRNOG00000054871	LOC103694865	69	86.118	ENSPCAG00000009582	TAF15	63	86.224	Procavia_capensis
ENSRNOG00000054871	LOC103694865	70	95.165	ENSPCOG00000007032	TAF15	67	95.153	Propithecus_coquereli
ENSRNOG00000054871	LOC103694865	70	94.924	ENSRBIG00000043192	TAF15	75	96.131	Rhinopithecus_bieti
ENSRNOG00000054871	LOC103694865	70	94.924	ENSRROG00000029426	TAF15	75	96.131	Rhinopithecus_roxellana
ENSRNOG00000054871	LOC103694865	70	94.924	ENSSBOG00000019731	-	77	94.911	Saimiri_boliviensis_boliviensis
ENSRNOG00000054871	LOC103694865	54	77.667	ENSSBOG00000032185	-	72	75.667	Saimiri_boliviensis_boliviensis
ENSRNOG00000054871	LOC103694865	87	85.657	ENSSARG00000012092	TAF15	68	94.388	Sorex_araneus
ENSRNOG00000054871	LOC103694865	69	62.759	ENSSPUG00000006042	TAF15	90	65.237	Sphenodon_punctatus
ENSRNOG00000054871	LOC103694865	70	75.879	ENSTGUG00000004702	TAF15	92	78.173	Taeniopygia_guttata
ENSRNOG00000054871	LOC103694865	72	95.771	ENSTTRG00000014145	TAF15	71	95.663	Tursiops_truncatus
ENSRNOG00000054871	LOC103694865	69	90.488	ENSUAMG00000004942	TAF15	74	93.085	Ursus_americanus
ENSRNOG00000054871	LOC103694865	70	95.165	ENSUMAG00000016876	TAF15	69	95.153	Ursus_maritimus
ENSRNOG00000054871	LOC103694865	58	91.975	ENSVPAG00000001667	TAF15	53	91.975	Vicugna_pacos
ENSRNOG00000054871	LOC103694865	70	95.674	ENSVVUG00000020375	TAF15	70	95.663	Vulpes_vulpes
ENSRNOG00000054871	LOC103694865	66	48.499	ENSXETG00000013477	taf15	92	48.421	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function