EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000055344 (Gene tree)
Gene ID: -
Gene Symbol: Trnau1ap
Alias: LOC100365522|LOC682894|Secp43|Trspap1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 14285 bases
Position: chr5:150492587-150506871
Accession: 619995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070906	RRM_1	PF00076.22	2.8e-27	1	2
ENSRNOP00000070906	RRM_1	PF00076.22	2.8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000086131	-	2222	-	ENSRNOP00000070906	293 (aa)	-	A0A0G2JZ46

Gene Model

Click here to download ENSRNOG00000055344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000055344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000055344	Trnau1ap	88	30.198	ENSRNOG00000016813	Tia1	50	30.769
ENSRNOG00000055344	Trnau1ap	67	31.847	ENSRNOG00000017367	Pabpc6	58	31.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSG00000180098	TRNAU1AP	94	90.775	Homo_sapiens
ENSRNOG00000055344	Trnau1ap	92	54.225	ENSAPOG00000007148	TRNAU1AP	92	54.225	Acanthochromis_polyacanthus
ENSRNOG00000055344	Trnau1ap	92	89.668	ENSAMEG00000011367	TRNAU1AP	94	89.668	Ailuropoda_melanoleuca
ENSRNOG00000055344	Trnau1ap	93	70.115	ENSACIG00000004161	trnau1apa	83	60.714	Amphilophus_citrinellus
ENSRNOG00000055344	Trnau1ap	92	54.577	ENSAOCG00000008056	trnau1apa	92	54.577	Amphiprion_ocellaris
ENSRNOG00000055344	Trnau1ap	92	54.577	ENSAPEG00000008868	trnau1apa	92	54.577	Amphiprion_percula
ENSRNOG00000055344	Trnau1ap	92	54.795	ENSATEG00000012140	trnau1apa	92	52.740	Anabas_testudineus
ENSRNOG00000055344	Trnau1ap	91	85.338	ENSAPLG00000002606	TRNAU1AP	97	85.338	Anas_platyrhynchos
ENSRNOG00000055344	Trnau1ap	92	69.004	ENSACAG00000003995	-	94	69.004	Anolis_carolinensis
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSANAG00000018976	TRNAU1AP	94	90.775	Aotus_nancymaae
ENSRNOG00000055344	Trnau1ap	81	59.200	ENSACLG00000018515	trnau1apa	82	60.887	Astatotilapia_calliptera
ENSRNOG00000055344	Trnau1ap	82	56.967	ENSAMXG00000013750	trnau1apa	79	56.967	Astyanax_mexicanus
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSBTAG00000010393	TRNAU1AP	94	90.406	Bos_taurus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCJAG00000009717	TRNAU1AP	89	100.000	Callithrix_jacchus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCAFG00000011735	TRNAU1AP	94	90.775	Canis_familiaris
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCAFG00020023584	TRNAU1AP	94	90.775	Canis_lupus_dingo
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSCHIG00000023215	TRNAU1AP	94	90.406	Capra_hircus
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSTSYG00000003506	TRNAU1AP	89	100.000	Carlito_syrichta
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCPOG00000001925	TRNAU1AP	94	90.775	Cavia_porcellus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCCAG00000037506	TRNAU1AP	89	100.000	Cebus_capucinus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCATG00000044617	TRNAU1AP	89	100.000	Cercocebus_atys
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSCLAG00000008223	TRNAU1AP	94	90.406	Chinchilla_lanigera
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCSAG00000001014	TRNAU1AP	94	90.775	Chlorocebus_sabaeus
ENSRNOG00000055344	Trnau1ap	81	92.017	ENSCPBG00000000121	TRNAU1AP	94	86.434	Chrysemys_picta_bellii
ENSRNOG00000055344	Trnau1ap	58	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSRNOG00000055344	Trnau1ap	92	78.229	ENSCANG00000041949	TRNAU1AP	91	84.472	Colobus_angolensis_palliatus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCGRG00001004713	Trnau1ap	94	90.775	Cricetulus_griseus_chok1gshd
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSCGRG00000014532	Trnau1ap	94	90.775	Cricetulus_griseus_crigri
ENSRNOG00000055344	Trnau1ap	85	55.970	ENSCSEG00000006663	trnau1apa	85	54.444	Cynoglossus_semilaevis
ENSRNOG00000055344	Trnau1ap	82	59.533	ENSCVAG00000018069	trnau1apa	89	58.268	Cyprinodon_variegatus
ENSRNOG00000055344	Trnau1ap	82	53.036	ENSDARG00000101323	trnau1apa	78	51.210	Danio_rerio
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSDNOG00000033009	TRNAU1AP	94	90.775	Dasypus_novemcinctus
ENSRNOG00000055344	Trnau1ap	63	79.032	ENSDNOG00000047959	-	94	79.558	Dasypus_novemcinctus
ENSRNOG00000055344	Trnau1ap	79	99.567	ENSDORG00000006349	Trnau1ap	100	99.567	Dipodomys_ordii
ENSRNOG00000055344	Trnau1ap	74	44.000	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSRNOG00000055344	Trnau1ap	65	99.471	ENSETEG00000012594	TRNAU1AP	77	99.471	Echinops_telfairi
ENSRNOG00000055344	Trnau1ap	54	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSEASG00005010062	TRNAU1AP	93	100.000	Equus_asinus_asinus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSECAG00000012980	TRNAU1AP	93	100.000	Equus_caballus
ENSRNOG00000055344	Trnau1ap	85	60.385	ENSELUG00000017686	trnau1apa	85	59.459	Esox_lucius
ENSRNOG00000055344	Trnau1ap	87	72.043	ENSELUG00000022790	-	83	52.778	Esox_lucius
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSFCAG00000013401	TRNAU1AP	94	90.775	Felis_catus
ENSRNOG00000055344	Trnau1ap	88	85.659	ENSFALG00000001371	TRNAU1AP	94	85.659	Ficedula_albicollis
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSFDAG00000018599	TRNAU1AP	94	90.406	Fukomys_damarensis
ENSRNOG00000055344	Trnau1ap	85	57.519	ENSFHEG00000018232	trnau1apa	89	55.639	Fundulus_heteroclitus
ENSRNOG00000055344	Trnau1ap	72	54.091	ENSGMOG00000016508	trnau1apa	92	48.571	Gadus_morhua
ENSRNOG00000055344	Trnau1ap	92	85.609	ENSGALG00000001310	-	93	93.827	Gallus_gallus
ENSRNOG00000055344	Trnau1ap	51	46.309	ENSGALG00000012721	C2H6orf52	68	41.026	Gallus_gallus
ENSRNOG00000055344	Trnau1ap	77	58.403	ENSGAFG00000004928	trnau1apa	97	57.588	Gambusia_affinis
ENSRNOG00000055344	Trnau1ap	92	56.228	ENSGACG00000001443	trnau1apa	92	55.872	Gasterosteus_aculeatus
ENSRNOG00000055344	Trnau1ap	81	92.437	ENSGAGG00000004940	TRNAU1AP	94	86.822	Gopherus_agassizii
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSGGOG00000003511	TRNAU1AP	89	100.000	Gorilla_gorilla
ENSRNOG00000055344	Trnau1ap	81	58.039	ENSHBUG00000002510	trnau1apa	82	59.684	Haplochromis_burtoni
ENSRNOG00000055344	Trnau1ap	92	90.037	ENSHGLG00000010380	TRNAU1AP	94	90.037	Heterocephalus_glaber_female
ENSRNOG00000055344	Trnau1ap	92	87.454	ENSHGLG00100012699	TRNAU1AP	94	87.454	Heterocephalus_glaber_male
ENSRNOG00000055344	Trnau1ap	83	58.238	ENSHCOG00000014770	trnau1apa	83	56.015	Hippocampus_comes
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSSTOG00000000079	TRNAU1AP	94	90.775	Ictidomys_tridecemlineatus
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSJJAG00000010128	Trnau1ap	94	90.406	Jaculus_jaculus
ENSRNOG00000055344	Trnau1ap	77	61.925	ENSKMAG00000001230	trnau1apa	77	59.833	Kryptolebias_marmoratus
ENSRNOG00000055344	Trnau1ap	92	54.671	ENSLBEG00000011683	trnau1apa	92	53.793	Labrus_bergylta
ENSRNOG00000055344	Trnau1ap	92	66.171	ENSLACG00000005541	TRNAU1AP	94	66.171	Latimeria_chalumnae
ENSRNOG00000055344	Trnau1ap	91	66.296	ENSLOCG00000004041	trnau1apa	93	65.185	Lepisosteus_oculatus
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSLAFG00000007628	TRNAU1AP	94	90.406	Loxodonta_africana
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMFAG00000043751	TRNAU1AP	89	100.000	Macaca_fascicularis
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMMUG00000006561	TRNAU1AP	94	90.775	Macaca_mulatta
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMNEG00000044201	TRNAU1AP	89	100.000	Macaca_nemestrina
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMLEG00000015649	TRNAU1AP	89	100.000	Mandrillus_leucophaeus
ENSRNOG00000055344	Trnau1ap	92	55.556	ENSMAMG00000001247	trnau1apa	96	52.980	Mastacembelus_armatus
ENSRNOG00000055344	Trnau1ap	81	59.200	ENSMZEG00005017722	trnau1apa	82	60.887	Maylandia_zebra
ENSRNOG00000055344	Trnau1ap	89	85.115	ENSMGAG00000002105	TRNAU1AP	94	85.115	Meleagris_gallopavo
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMICG00000008386	TRNAU1AP	89	100.000	Microcebus_murinus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMOCG00000011189	Trnau1ap	94	90.775	Microtus_ochrogaster
ENSRNOG00000055344	Trnau1ap	77	59.556	ENSMMOG00000012107	trnau1apa	77	59.556	Mola_mola
ENSRNOG00000055344	Trnau1ap	92	87.823	ENSMODG00000010927	TRNAU1AP	94	87.823	Monodelphis_domestica
ENSRNOG00000055344	Trnau1ap	92	56.098	ENSMALG00000016778	trnau1apa	92	53.310	Monopterus_albus
ENSRNOG00000055344	Trnau1ap	92	90.775	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSRNOG00000055344	Trnau1ap	92	91.144	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSRNOG00000055344	Trnau1ap	92	90.775	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMPUG00000015511	TRNAU1AP	94	90.775	Mustela_putorius_furo
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSMLUG00000012586	TRNAU1AP	94	90.775	Myotis_lucifugus
ENSRNOG00000055344	Trnau1ap	86	94.821	ENSNGAG00000015881	Trnau1ap	94	89.299	Nannospalax_galili
ENSRNOG00000055344	Trnau1ap	77	60.793	ENSNBRG00000001758	trnau1apa	75	60.793	Neolamprologus_brichardi
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSNLEG00000009822	TRNAU1AP	89	100.000	Nomascus_leucogenys
ENSRNOG00000055344	Trnau1ap	89	86.641	ENSMEUG00000006117	TRNAU1AP	94	86.641	Notamacropus_eugenii
ENSRNOG00000055344	Trnau1ap	63	89.130	ENSOPRG00000007084	-	64	89.130	Ochotona_princeps
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSODEG00000002970	TRNAU1AP	94	90.775	Octodon_degus
ENSRNOG00000055344	Trnau1ap	78	59.036	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSRNOG00000055344	Trnau1ap	85	72.400	ENSOANG00000005325	-	86	72.400	Ornithorhynchus_anatinus
ENSRNOG00000055344	Trnau1ap	83	78.099	ENSOCUG00000006834	-	94	76.033	Oryctolagus_cuniculus
ENSRNOG00000055344	Trnau1ap	92	67.279	ENSOCUG00000002353	-	94	67.279	Oryctolagus_cuniculus
ENSRNOG00000055344	Trnau1ap	92	88.561	ENSOCUG00000011704	-	94	88.561	Oryctolagus_cuniculus
ENSRNOG00000055344	Trnau1ap	86	59.843	ENSORLG00000010428	trnau1apa	88	57.812	Oryzias_latipes
ENSRNOG00000055344	Trnau1ap	77	62.288	ENSORLG00020000926	trnau1ap	82	58.000	Oryzias_latipes_hni
ENSRNOG00000055344	Trnau1ap	77	62.288	ENSORLG00015009858	trnau1ap	82	58.000	Oryzias_latipes_hsok
ENSRNOG00000055344	Trnau1ap	77	62.288	ENSOMEG00000007873	trnau1apa	82	57.600	Oryzias_melastigma
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSOGAG00000002274	TRNAU1AP	94	90.775	Otolemur_garnettii
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSOARG00000002843	TRNAU1AP	94	90.406	Ovis_aries
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSPPAG00000033927	TRNAU1AP	89	100.000	Pan_paniscus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSPPRG00000004416	TRNAU1AP	94	90.775	Panthera_pardus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSPTIG00000016677	TRNAU1AP	94	90.775	Panthera_tigris_altaica
ENSRNOG00000055344	Trnau1ap	69	84.158	ENSPTRG00000000434	-	71	82.178	Pan_troglodytes
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSPANG00000016019	TRNAU1AP	89	100.000	Papio_anubis
ENSRNOG00000055344	Trnau1ap	85	57.143	ENSPKIG00000015511	trnau1apa	84	55.212	Paramormyrops_kingsleyae
ENSRNOG00000055344	Trnau1ap	79	79.310	ENSPKIG00000022205	-	77	79.310	Paramormyrops_kingsleyae
ENSRNOG00000055344	Trnau1ap	88	87.597	ENSPSIG00000006864	TRNAU1AP	94	87.597	Pelodiscus_sinensis
ENSRNOG00000055344	Trnau1ap	88	56.870	ENSPMGG00000023893	trnau1apa	87	55.556	Periophthalmus_magnuspinnatus
ENSRNOG00000055344	Trnau1ap	92	90.406	ENSPEMG00000007877	Trnau1ap	94	90.406	Peromyscus_maniculatus_bairdii
ENSRNOG00000055344	Trnau1ap	59	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSRNOG00000055344	Trnau1ap	74	62.500	ENSPMAG00000005934	trnau1apa	96	59.908	Petromyzon_marinus
ENSRNOG00000055344	Trnau1ap	92	53.521	ENSPFOG00000008100	trnau1apa	92	53.873	Poecilia_formosa
ENSRNOG00000055344	Trnau1ap	88	53.114	ENSPLAG00000010236	trnau1apa	92	53.480	Poecilia_latipinna
ENSRNOG00000055344	Trnau1ap	92	52.465	ENSPMEG00000016387	trnau1apa	90	52.797	Poecilia_mexicana
ENSRNOG00000055344	Trnau1ap	56	70.122	ENSPREG00000019821	trnau1apa	60	70.122	Poecilia_reticulata
ENSRNOG00000055344	Trnau1ap	92	68.266	ENSPPYG00000001639	-	94	76.033	Pongo_abelii
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSPCOG00000027712	-	94	90.775	Propithecus_coquereli
ENSRNOG00000055344	Trnau1ap	84	77.551	ENSPCOG00000023470	-	93	73.208	Propithecus_coquereli
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSPVAG00000017214	TRNAU1AP	94	90.775	Pteropus_vampyrus
ENSRNOG00000055344	Trnau1ap	77	65.185	ENSPNYG00000010130	trnau1apa	99	59.690	Pundamilia_nyererei
ENSRNOG00000055344	Trnau1ap	82	54.400	ENSPNAG00000024905	trnau1apa	64	64.706	Pygocentrus_nattereri
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSRBIG00000029083	TRNAU1AP	89	100.000	Rhinopithecus_bieti
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSRROG00000029128	TRNAU1AP	89	100.000	Rhinopithecus_roxellana
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSSBOG00000021299	TRNAU1AP	89	100.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000055344	Trnau1ap	92	87.823	ENSSHAG00000008108	TRNAU1AP	94	87.823	Sarcophilus_harrisii
ENSRNOG00000055344	Trnau1ap	58	68.421	ENSSMAG00000020851	trnau1apa	85	55.472	Scophthalmus_maximus
ENSRNOG00000055344	Trnau1ap	92	53.125	ENSSDUG00000011734	trnau1apa	92	51.736	Seriola_dumerili
ENSRNOG00000055344	Trnau1ap	89	89.313	ENSSARG00000007536	TRNAU1AP	94	89.313	Sorex_araneus
ENSRNOG00000055344	Trnau1ap	92	80.074	ENSSPUG00000010400	-	95	80.074	Sphenodon_punctatus
ENSRNOG00000055344	Trnau1ap	55	71.429	ENSSPUG00000010415	-	91	71.429	Sphenodon_punctatus
ENSRNOG00000055344	Trnau1ap	92	55.245	ENSSPAG00000005029	trnau1apa	92	55.245	Stegastes_partitus
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSSSCG00000030284	TRNAU1AP	94	90.775	Sus_scrofa
ENSRNOG00000055344	Trnau1ap	89	86.260	ENSTGUG00000000735	-	94	86.260	Taeniopygia_guttata
ENSRNOG00000055344	Trnau1ap	56	46.386	ENSTGUG00000005908	-	85	45.238	Taeniopygia_guttata
ENSRNOG00000055344	Trnau1ap	82	60.079	ENSTRUG00000003352	trnau1apa	82	59.289	Takifugu_rubripes
ENSRNOG00000055344	Trnau1ap	82	58.039	ENSTNIG00000006129	trnau1apa	82	58.039	Tetraodon_nigroviridis
ENSRNOG00000055344	Trnau1ap	74	81.193	ENSTBEG00000008049	-	92	78.070	Tupaia_belangeri
ENSRNOG00000055344	Trnau1ap	92	90.775	ENSTTRG00000001854	TRNAU1AP	94	90.775	Tursiops_truncatus
ENSRNOG00000055344	Trnau1ap	88	89.922	ENSUAMG00000008789	TRNAU1AP	94	89.922	Ursus_americanus
ENSRNOG00000055344	Trnau1ap	92	90.037	ENSUMAG00000011068	TRNAU1AP	94	90.037	Ursus_maritimus
ENSRNOG00000055344	Trnau1ap	92	79.348	ENSVPAG00000006778	TRNAU1AP	95	79.348	Vicugna_pacos
ENSRNOG00000055344	Trnau1ap	91	88.806	ENSVVUG00000012518	TRNAU1AP	78	99.138	Vulpes_vulpes
ENSRNOG00000055344	Trnau1ap	77	58.403	ENSXMAG00000017361	trnau1apa	92	53.521	Xiphophorus_maculatus