EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000055486 (Gene tree)
Gene ID: -
Gene Symbol: AABR07025316.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 2960 bases
Position: chr16:33373423-33376382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073637	RVT_1	PF00078.27	2e-21	1	1
ENSRNOP00000073831	Transposase_22	PF02994.14	3e-45	1	1
ENSRNOP00000073637	Transposase_22	PF02994.14	4.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079157	AABR07025316.1-202	1743	-	ENSRNOP00000073831	581 (aa)	-	A0A0G2K6I8
ENSRNOT00000091672	AABR07025316.1-201	2439	-	ENSRNOP00000073637	813 (aa)	-	A0A0G2K614

Gene Model

Click here to download ENSRNOG00000055486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000055486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000055486	AABR07025316.1	99	94.549	ENSRNOG00000056748	AC229945.1	50	94.549
ENSRNOG00000055486	AABR07025316.1	99	94.719	ENSRNOG00000047294	AABR07043115.1	50	94.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000055486	AABR07025316.1	60	31.856	ENSAPOG00000010713	-	90	31.856	Acanthochromis_polyacanthus
ENSRNOG00000055486	AABR07025316.1	52	31.066	ENSACAG00000024977	-	86	31.066	Anolis_carolinensis
ENSRNOG00000055486	AABR07025316.1	62	30.831	ENSACAG00000027405	-	98	30.172	Anolis_carolinensis
ENSRNOG00000055486	AABR07025316.1	59	30.939	ENSACAG00000023809	-	74	30.252	Anolis_carolinensis
ENSRNOG00000055486	AABR07025316.1	71	61.735	ENSBTAG00000051661	-	81	61.735	Bos_taurus
ENSRNOG00000055486	AABR07025316.1	71	62.075	ENSBTAG00000049832	-	86	62.075	Bos_taurus
ENSRNOG00000055486	AABR07025316.1	71	58.574	ENSCAFG00020005033	-	90	58.574	Canis_lupus_dingo
ENSRNOG00000055486	AABR07025316.1	71	57.385	ENSCAFG00020025733	-	88	57.385	Canis_lupus_dingo
ENSRNOG00000055486	AABR07025316.1	71	58.404	ENSCAFG00020022746	-	92	58.404	Canis_lupus_dingo
ENSRNOG00000055486	AABR07025316.1	71	59.423	ENSCAFG00020025686	-	90	59.423	Canis_lupus_dingo
ENSRNOG00000055486	AABR07025316.1	71	59.593	ENSCAFG00020005832	-	90	59.593	Canis_lupus_dingo
ENSRNOG00000055486	AABR07025316.1	73	52.893	ENSECAG00000033406	-	81	52.893	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	77	55.763	ENSECAG00000028502	-	95	55.763	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.116	ENSECAG00000002366	-	89	64.116	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.116	ENSECAG00000039409	-	84	64.116	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.626	ENSECAG00000022996	-	80	64.626	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	62.075	ENSECAG00000035025	-	81	62.075	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	55.782	ENSECAG00000009538	-	74	55.782	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.116	ENSECAG00000032645	-	80	64.116	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.796	ENSECAG00000024108	-	77	64.796	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	59.241	ENSECAG00000001832	-	89	59.241	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	63.605	ENSECAG00000034422	-	82	63.605	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	63.435	ENSECAG00000038486	-	84	63.435	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	59.284	ENSECAG00000009786	-	86	59.284	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	60.034	ENSECAG00000006074	-	78	60.034	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	59.571	ENSECAG00000003040	-	90	59.571	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.626	ENSECAG00000019733	-	79	64.626	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	59.571	ENSECAG00000018259	-	87	59.571	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	56.122	ENSECAG00000037921	-	82	56.122	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	59.864	ENSECAG00000017643	-	82	59.864	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	59.241	ENSECAG00000004060	-	82	59.241	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	63.776	ENSECAG00000038473	-	79	63.776	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.796	ENSECAG00000024855	-	83	64.796	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	58.581	ENSECAG00000035421	-	80	58.581	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	57.756	ENSECAG00000022591	-	90	57.756	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	63.946	ENSECAG00000029804	-	83	63.946	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	72	63.912	ENSECAG00000038202	-	89	63.912	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	64.796	ENSECAG00000023557	-	83	64.796	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	73	59.934	ENSECAG00000027915	-	83	59.934	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	63.605	ENSECAG00000038351	-	81	63.605	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	71	63.497	ENSECAG00000004016	-	81	63.497	Equus_caballus
ENSRNOG00000055486	AABR07025316.1	54	52.215	ENSMMUG00000029743	-	84	53.548	Macaca_mulatta
ENSRNOG00000055486	AABR07025316.1	56	42.202	ENSMODG00000027929	-	91	42.202	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	49.722	ENSMODG00000029642	-	94	49.722	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	51	41.060	ENSMODG00000028497	-	90	41.060	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	64	47.637	ENSMODG00000028945	-	93	47.637	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	58	43.732	ENSMODG00000028366	-	91	43.732	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	59	42.000	ENSMODG00000028367	-	89	42.000	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	53	41.853	ENSMODG00000029531	-	91	41.853	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	43.342	ENSMODG00000028435	-	91	43.970	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	53	41.534	ENSMODG00000028779	-	91	41.534	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	57	42.183	ENSMODG00000029309	-	90	42.183	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000029306	-	92	45.361	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	43.081	ENSMODG00000028480	-	91	43.719	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	63	40.270	ENSMODG00000027861	-	92	40.270	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	59	42.857	ENSMODG00000027480	-	89	42.857	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000027367	-	92	43.936	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	44.125	ENSMODG00000028002	-	92	46.711	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	57	41.543	ENSMODG00000029721	-	91	41.543	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	52	41.424	ENSMODG00000029727	-	91	41.424	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	59	39.193	ENSMODG00000027305	-	84	38.873	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000029039	-	92	44.667	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000028310	-	91	44.662	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	50	43.243	ENSMODG00000029202	-	90	43.243	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.820	ENSMODG00000028151	-	92	45.825	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	66	49.088	ENSMODG00000029775	-	93	49.088	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	59	42.286	ENSMODG00000027742	-	90	42.286	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	53	41.613	ENSMODG00000029048	-	91	41.613	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	50	42.321	ENSMODG00000028105	-	90	42.321	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	56	42.643	ENSMODG00000027905	-	91	42.643	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	66	49.088	ENSMODG00000028533	-	93	49.088	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000029668	-	93	46.293	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	54	41.379	ENSMODG00000029032	-	97	41.379	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000027335	-	93	46.076	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.820	ENSMODG00000029455	-	91	43.447	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	51	41.060	ENSMODG00000028110	-	90	41.060	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	67	48.556	ENSMODG00000029558	-	93	48.556	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.559	ENSMODG00000028917	-	91	42.928	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	50	42.321	ENSMODG00000029216	-	90	42.321	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	63	46.947	ENSMODG00000028861	-	96	46.947	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.559	ENSMODG00000029485	-	91	43.377	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.670	ENSMODG00000028754	-	92	42.670	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	43.864	ENSMODG00000029360	-	91	44.472	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	64	42.857	ENSMODG00000029159	-	92	42.857	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	48.704	ENSMODG00000028203	-	93	48.704	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	61	46.918	ENSMODG00000028838	-	93	46.918	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.559	ENSMODG00000027780	-	92	45.951	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	54	41.379	ENSMODG00000029330	-	91	41.379	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.820	ENSMODG00000029275	-	92	45.643	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	53	40.895	ENSMODG00000028229	-	91	40.895	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	68	49.376	ENSMODG00000028571	-	93	49.376	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.559	ENSMODG00000029755	-	92	44.444	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.037	ENSMODG00000028309	-	92	44.493	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	67	48.825	ENSMODG00000029351	-	93	48.825	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	62	42.077	ENSMODG00000027405	-	96	42.077	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	51	40.728	ENSMODG00000029189	-	89	40.728	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	64	42.513	ENSMODG00000028052	-	92	42.513	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000027840	-	91	43.387	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	43.603	ENSMODG00000027353	-	91	46.053	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000029433	-	91	42.961	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	52	43.182	ENSMODG00000028295	-	88	43.182	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	63	43.968	ENSMODG00000028508	-	91	43.968	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	61	46.733	ENSMODG00000029624	-	93	46.733	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.559	ENSMODG00000027980	-	91	42.559	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	44.125	ENSMODG00000028148	-	92	46.325	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	51	41.333	ENSMODG00000028731	-	94	41.333	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	51	41.860	ENSMODG00000027823	-	90	41.860	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.559	ENSMODG00000027569	-	91	42.559	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	49.536	ENSMODG00000028993	-	100	49.536	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	51	41.391	ENSMODG00000028762	-	89	41.391	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	42.298	ENSMODG00000029061	-	91	42.298	Monodelphis_domestica
ENSRNOG00000055486	AABR07025316.1	65	76.702	ENSMUSG00000096463	Gm21750	87	78.241	Mus_musculus
ENSRNOG00000055486	AABR07025316.1	65	77.285	ENSMUSG00000094472	Gm21897	87	78.984	Mus_musculus
ENSRNOG00000055486	AABR07025316.1	56	74.772	ENSMUSG00000090353	Gm17555	89	74.772	Mus_musculus
ENSRNOG00000055486	AABR07025316.1	66	76.289	ENSMUSG00000094030	Gm21833	86	77.209	Mus_musculus
ENSRNOG00000055486	AABR07025316.1	65	75.718	ENSMUSG00000096808	AC132444.6	87	77.598	Mus_musculus
ENSRNOG00000055486	AABR07025316.1	53	62.870	ENSMPUG00000019478	-	99	62.870	Mustela_putorius_furo
ENSRNOG00000055486	AABR07025316.1	60	53.672	ENSMPUG00000018497	-	87	53.672	Mustela_putorius_furo
ENSRNOG00000055486	AABR07025316.1	74	59.135	ENSOCUG00000029537	-	96	59.135	Oryctolagus_cuniculus
ENSRNOG00000055486	AABR07025316.1	71	62.075	ENSOCUG00000029155	-	85	62.075	Oryctolagus_cuniculus
ENSRNOG00000055486	AABR07025316.1	65	54.569	ENSOARG00000013322	-	90	55.294	Ovis_aries
ENSRNOG00000055486	AABR07025316.1	71	59.762	ENSVVUG00000006739	-	84	59.762	Vulpes_vulpes
ENSRNOG00000055486	AABR07025316.1	71	59.762	ENSVVUG00000019932	-	84	59.762	Vulpes_vulpes
ENSRNOG00000055486	AABR07025316.1	71	59.593	ENSVVUG00000018154	-	88	59.593	Vulpes_vulpes
ENSRNOG00000055486	AABR07025316.1	71	59.593	ENSVVUG00000014466	-	86	59.593	Vulpes_vulpes
ENSRNOG00000055486	AABR07025316.1	58	31.143	ENSXETG00000032876	-	86	31.534	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	64	30.789	ENSXETG00000033118	-	94	30.512	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	51	30.000	ENSXETG00000031821	-	81	30.000	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	55	32.530	ENSXETG00000027781	-	89	32.277	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	64	30.789	ENSXETG00000031237	-	94	30.512	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	64	30.000	ENSXETG00000033336	-	76	30.263	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	64	30.789	ENSXETG00000031161	-	94	30.512	Xenopus_tropicalis
ENSRNOG00000055486	AABR07025316.1	55	30.368	ENSXCOG00000009068	-	77	30.499	Xiphophorus_couchianus