EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000056041 (Gene tree)
Gene ID: -
Gene Symbol: AABR07062570.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 64015 bases
Position: chr4:183229985-183293999
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073839	IBN_N	PF03810.19	6.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079695	AABR07062570.1-201	2898	-	ENSRNOP00000073839	966 (aa)	-	A0A0G2K6J6

Gene Model

Click here to download ENSRNOG00000056041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000056041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000056041	AABR07062570.1	100	55.658	ENSRNOG00000010427	Ipo7	93	55.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000056041	AABR07062570.1	100	76.495	ENSG00000133704	IPO8	100	96.970	Homo_sapiens
ENSRNOG00000056041	AABR07062570.1	100	75.876	ENSAMEG00000009154	IPO8	93	75.155	Ailuropoda_melanoleuca
ENSRNOG00000056041	AABR07062570.1	96	58.242	ENSACIG00000005543	ipo8	93	58.242	Amphilophus_citrinellus
ENSRNOG00000056041	AABR07062570.1	100	61.578	ENSAOCG00000018199	ipo8	95	60.861	Amphiprion_ocellaris
ENSRNOG00000056041	AABR07062570.1	100	61.578	ENSAPEG00000002396	ipo8	95	60.861	Amphiprion_percula
ENSRNOG00000056041	AABR07062570.1	100	54.508	ENSATEG00000023469	ipo8	93	53.996	Anabas_testudineus
ENSRNOG00000056041	AABR07062570.1	97	69.141	ENSAPLG00000009843	IPO8	95	68.929	Anas_platyrhynchos
ENSRNOG00000056041	AABR07062570.1	100	69.365	ENSACAG00000012959	IPO8	93	69.026	Anolis_carolinensis
ENSRNOG00000056041	AABR07062570.1	100	75.773	ENSANAG00000032923	IPO8	93	75.155	Aotus_nancymaae
ENSRNOG00000056041	AABR07062570.1	100	61.231	ENSACLG00000015219	ipo8	95	62.528	Astatotilapia_calliptera
ENSRNOG00000056041	AABR07062570.1	100	60.754	ENSAMXG00000036026	ipo8	95	60.652	Astyanax_mexicanus
ENSRNOG00000056041	AABR07062570.1	100	76.495	ENSBTAG00000014106	IPO8	93	75.670	Bos_taurus
ENSRNOG00000056041	AABR07062570.1	100	75.361	ENSCJAG00000001057	IPO8	93	74.742	Callithrix_jacchus
ENSRNOG00000056041	AABR07062570.1	100	75.979	ENSCAFG00000010768	IPO8	93	75.052	Canis_familiaris
ENSRNOG00000056041	AABR07062570.1	100	76.132	ENSCAFG00020013795	IPO8	93	75.206	Canis_lupus_dingo
ENSRNOG00000056041	AABR07062570.1	100	76.598	ENSCHIG00000022393	IPO8	95	75.773	Capra_hircus
ENSRNOG00000056041	AABR07062570.1	100	76.598	ENSTSYG00000004436	IPO8	93	75.876	Carlito_syrichta
ENSRNOG00000056041	AABR07062570.1	97	68.823	ENSCAPG00000013099	IPO8	100	69.600	Cavia_aperea
ENSRNOG00000056041	AABR07062570.1	100	76.161	ENSCPOG00000010365	IPO8	100	78.431	Cavia_porcellus
ENSRNOG00000056041	AABR07062570.1	100	75.876	ENSCCAG00000027484	IPO8	93	75.155	Cebus_capucinus
ENSRNOG00000056041	AABR07062570.1	100	76.804	ENSCATG00000038860	IPO8	93	75.876	Cercocebus_atys
ENSRNOG00000056041	AABR07062570.1	100	76.598	ENSCLAG00000002557	IPO8	100	78.676	Chinchilla_lanigera
ENSRNOG00000056041	AABR07062570.1	100	76.804	ENSCSAG00000007458	IPO8	93	75.876	Chlorocebus_sabaeus
ENSRNOG00000056041	AABR07062570.1	100	70.492	ENSCPBG00000027234	IPO8	93	70.082	Chrysemys_picta_bellii
ENSRNOG00000056041	AABR07062570.1	100	74.227	ENSCANG00000022452	IPO8	93	73.299	Colobus_angolensis_palliatus
ENSRNOG00000056041	AABR07062570.1	100	78.306	ENSCGRG00001014551	Ipo8	95	78.306	Cricetulus_griseus_chok1gshd
ENSRNOG00000056041	AABR07062570.1	97	77.340	ENSCGRG00000002481	Ipo8	100	78.421	Cricetulus_griseus_crigri
ENSRNOG00000056041	AABR07062570.1	100	59.611	ENSCSEG00000003320	ipo8	95	59.263	Cynoglossus_semilaevis
ENSRNOG00000056041	AABR07062570.1	73	58.179	ENSCVAG00000013038	ipo8	96	58.179	Cyprinodon_variegatus
ENSRNOG00000056041	AABR07062570.1	100	58.974	ENSDARG00000058159	ipo8	95	59.077	Danio_rerio
ENSRNOG00000056041	AABR07062570.1	97	74.337	ENSDORG00000005959	Ipo8	100	76.053	Dipodomys_ordii
ENSRNOG00000056041	AABR07062570.1	100	76.289	ENSEASG00005006112	IPO8	95	74.717	Equus_asinus_asinus
ENSRNOG00000056041	AABR07062570.1	100	76.289	ENSECAG00000012848	IPO8	93	75.567	Equus_caballus
ENSRNOG00000056041	AABR07062570.1	75	71.154	ENSEEUG00000007618	-	77	69.551	Erinaceus_europaeus
ENSRNOG00000056041	AABR07062570.1	100	60.878	ENSELUG00000001212	ipo8	95	60.612	Esox_lucius
ENSRNOG00000056041	AABR07062570.1	100	75.876	ENSFCAG00000007002	IPO8	93	74.948	Felis_catus
ENSRNOG00000056041	AABR07062570.1	100	59.836	ENSFHEG00000004531	ipo8	95	59.631	Fundulus_heteroclitus
ENSRNOG00000056041	AABR07062570.1	77	65.272	ENSGMOG00000008722	ipo8	75	65.272	Gadus_morhua
ENSRNOG00000056041	AABR07062570.1	100	70.113	ENSGALG00000012953	IPO8	93	69.806	Gallus_gallus
ENSRNOG00000056041	AABR07062570.1	100	59.346	ENSGAFG00000005851	ipo8	95	59.021	Gambusia_affinis
ENSRNOG00000056041	AABR07062570.1	100	56.592	ENSGACG00000019236	IPO8	96	56.288	Gasterosteus_aculeatus
ENSRNOG00000056041	AABR07062570.1	100	70.348	ENSGAGG00000015070	IPO8	93	69.836	Gopherus_agassizii
ENSRNOG00000056041	AABR07062570.1	100	76.598	ENSGGOG00000023152	IPO8	93	75.670	Gorilla_gorilla
ENSRNOG00000056041	AABR07062570.1	100	61.145	ENSHBUG00000012196	ipo8	95	61.145	Haplochromis_burtoni
ENSRNOG00000056041	AABR07062570.1	100	76.646	ENSHGLG00000011526	IPO8	100	79.167	Heterocephalus_glaber_female
ENSRNOG00000056041	AABR07062570.1	100	75.309	ENSHGLG00100010369	IPO8	100	79.167	Heterocephalus_glaber_male
ENSRNOG00000056041	AABR07062570.1	100	58.751	ENSHCOG00000013067	ipo8	95	58.384	Hippocampus_comes
ENSRNOG00000056041	AABR07062570.1	100	59.734	ENSIPUG00000020709	ipo8	96	59.836	Ictalurus_punctatus
ENSRNOG00000056041	AABR07062570.1	100	73.554	ENSJJAG00000021253	Ipo8	100	76.716	Jaculus_jaculus
ENSRNOG00000056041	AABR07062570.1	96	57.771	ENSLBEG00000028213	ipo8	94	57.771	Labrus_bergylta
ENSRNOG00000056041	AABR07062570.1	100	63.442	ENSLACG00000004177	IPO8	95	62.729	Latimeria_chalumnae
ENSRNOG00000056041	AABR07062570.1	100	59.451	ENSLOCG00000015102	ipo8	95	59.045	Lepisosteus_oculatus
ENSRNOG00000056041	AABR07062570.1	100	72.634	ENSLAFG00000012885	IPO8	99	71.586	Loxodonta_africana
ENSRNOG00000056041	AABR07062570.1	100	76.804	ENSMFAG00000012472	IPO8	93	75.876	Macaca_fascicularis
ENSRNOG00000056041	AABR07062570.1	100	76.804	ENSMMUG00000001361	IPO8	71	100.000	Macaca_mulatta
ENSRNOG00000056041	AABR07062570.1	100	76.804	ENSMNEG00000039910	IPO8	93	75.876	Macaca_nemestrina
ENSRNOG00000056041	AABR07062570.1	100	76.701	ENSMLEG00000031593	IPO8	93	75.773	Mandrillus_leucophaeus
ENSRNOG00000056041	AABR07062570.1	100	61.333	ENSMAMG00000023301	ipo8	98	61.043	Mastacembelus_armatus
ENSRNOG00000056041	AABR07062570.1	100	61.231	ENSMZEG00005008224	ipo8	95	61.231	Maylandia_zebra
ENSRNOG00000056041	AABR07062570.1	100	78.822	ENSMAUG00000011526	Ipo8	100	80.882	Mesocricetus_auratus
ENSRNOG00000056041	AABR07062570.1	100	75.695	ENSMICG00000010635	IPO8	93	75.489	Microcebus_murinus
ENSRNOG00000056041	AABR07062570.1	100	53.696	ENSMMOG00000007268	ipo8	95	53.320	Mola_mola
ENSRNOG00000056041	AABR07062570.1	100	60.308	ENSMALG00000021008	ipo8	95	60.082	Monopterus_albus
ENSRNOG00000056041	AABR07062570.1	100	81.405	MGP_CAROLIEiJ_G0029072	Ipo8	100	81.618	Mus_caroli
ENSRNOG00000056041	AABR07062570.1	100	81.198	ENSMUSG00000040029	Ipo8	100	81.618	Mus_musculus
ENSRNOG00000056041	AABR07062570.1	100	81.715	MGP_PahariEiJ_G0022833	Ipo8	100	81.618	Mus_pahari
ENSRNOG00000056041	AABR07062570.1	100	81.302	MGP_SPRETEiJ_G0030127	Ipo8	100	81.618	Mus_spretus
ENSRNOG00000056041	AABR07062570.1	100	76.082	ENSMPUG00000011001	IPO8	93	75.258	Mustela_putorius_furo
ENSRNOG00000056041	AABR07062570.1	97	74.655	ENSMLUG00000007721	IPO8	92	74.019	Myotis_lucifugus
ENSRNOG00000056041	AABR07062570.1	100	76.136	ENSNGAG00000001055	Ipo8	100	77.206	Nannospalax_galili
ENSRNOG00000056041	AABR07062570.1	91	80.751	ENSNBRG00000006642	-	95	80.751	Neolamprologus_brichardi
ENSRNOG00000056041	AABR07062570.1	100	76.598	ENSNLEG00000005683	IPO8	93	75.670	Nomascus_leucogenys
ENSRNOG00000056041	AABR07062570.1	100	61.231	ENSONIG00000012030	ipo8	95	61.231	Oreochromis_niloticus
ENSRNOG00000056041	AABR07062570.1	66	68.868	ENSOCUG00000029016	IPO8	97	68.868	Oryctolagus_cuniculus
ENSRNOG00000056041	AABR07062570.1	100	58.872	ENSORLG00000012548	ipo8	95	58.504	Oryzias_latipes
ENSRNOG00000056041	AABR07062570.1	84	55.405	ENSORLG00020020896	ipo8	93	55.405	Oryzias_latipes_hni
ENSRNOG00000056041	AABR07062570.1	100	58.667	ENSORLG00015019508	ipo8	95	58.299	Oryzias_latipes_hsok
ENSRNOG00000056041	AABR07062570.1	100	58.256	ENSOMEG00000021459	ipo8	95	57.992	Oryzias_melastigma
ENSRNOG00000056041	AABR07062570.1	100	75.670	ENSOGAG00000010059	IPO8	95	74.845	Otolemur_garnettii
ENSRNOG00000056041	AABR07062570.1	100	76.495	ENSOARG00000019534	IPO8	93	75.670	Ovis_aries
ENSRNOG00000056041	AABR07062570.1	100	76.598	ENSPPAG00000042123	IPO8	93	75.670	Pan_paniscus
ENSRNOG00000056041	AABR07062570.1	100	75.979	ENSPPRG00000015678	IPO8	93	75.052	Panthera_pardus
ENSRNOG00000056041	AABR07062570.1	100	74.742	ENSPTIG00000014323	IPO8	93	73.814	Panthera_tigris_altaica
ENSRNOG00000056041	AABR07062570.1	100	76.701	ENSPTRG00000004801	IPO8	93	75.773	Pan_troglodytes
ENSRNOG00000056041	AABR07062570.1	100	76.804	ENSPANG00000013653	IPO8	93	75.876	Papio_anubis
ENSRNOG00000056041	AABR07062570.1	100	60.923	ENSPKIG00000011380	ipo8	95	59.796	Paramormyrops_kingsleyae
ENSRNOG00000056041	AABR07062570.1	68	68.189	ENSPSIG00000017127	IPO8	99	68.189	Pelodiscus_sinensis
ENSRNOG00000056041	AABR07062570.1	100	71.753	ENSPCIG00000015209	IPO8	92	72.284	Phascolarctos_cinereus
ENSRNOG00000056041	AABR07062570.1	100	59.653	ENSPFOG00000000833	IPO8	95	59.123	Poecilia_formosa
ENSRNOG00000056041	AABR07062570.1	100	58.264	ENSPMEG00000023545	IPO8	95	57.819	Poecilia_mexicana
ENSRNOG00000056041	AABR07062570.1	100	59.407	ENSPREG00000012667	-	96	58.733	Poecilia_reticulata
ENSRNOG00000056041	AABR07062570.1	74	86.842	ENSPCAG00000015590	IPO8	69	86.842	Procavia_capensis
ENSRNOG00000056041	AABR07062570.1	100	76.392	ENSPCOG00000018051	IPO8	93	75.670	Propithecus_coquereli
ENSRNOG00000056041	AABR07062570.1	93	78.452	ENSPVAG00000006079	IPO8	89	78.452	Pteropus_vampyrus
ENSRNOG00000056041	AABR07062570.1	100	61.231	ENSPNYG00000020683	ipo8	95	61.231	Pundamilia_nyererei
ENSRNOG00000056041	AABR07062570.1	100	60.861	ENSPNAG00000001408	ipo8	95	60.758	Pygocentrus_nattereri
ENSRNOG00000056041	AABR07062570.1	100	76.701	ENSRBIG00000027706	IPO8	93	75.773	Rhinopithecus_bieti
ENSRNOG00000056041	AABR07062570.1	100	76.701	ENSRROG00000035930	IPO8	95	75.773	Rhinopithecus_roxellana
ENSRNOG00000056041	AABR07062570.1	100	75.876	ENSSBOG00000031275	IPO8	93	75.155	Saimiri_boliviensis_boliviensis
ENSRNOG00000056041	AABR07062570.1	100	62.231	ENSSFOG00015022699	ipo8	95	62.027	Scleropages_formosus
ENSRNOG00000056041	AABR07062570.1	100	60.143	ENSSDUG00000019961	ipo8	95	59.734	Seriola_dumerili
ENSRNOG00000056041	AABR07062570.1	100	69.980	ENSSPUG00000013387	IPO8	93	69.467	Sphenodon_punctatus
ENSRNOG00000056041	AABR07062570.1	100	60.981	ENSSPAG00000018051	ipo8	95	60.674	Stegastes_partitus
ENSRNOG00000056041	AABR07062570.1	100	76.392	ENSSSCG00000000534	IPO8	93	75.670	Sus_scrofa
ENSRNOG00000056041	AABR07062570.1	99	68.560	ENSTGUG00000011446	IPO8	100	70.829	Taeniopygia_guttata
ENSRNOG00000056041	AABR07062570.1	100	58.223	ENSTRUG00000012975	ipo8	95	57.916	Takifugu_rubripes
ENSRNOG00000056041	AABR07062570.1	100	58.316	ENSTNIG00000007224	-	96	57.673	Tetraodon_nigroviridis
ENSRNOG00000056041	AABR07062570.1	92	84.091	ENSTTRG00000008462	IPO8	86	78.788	Tursiops_truncatus
ENSRNOG00000056041	AABR07062570.1	78	71.958	ENSUAMG00000012054	IPO8	96	71.958	Ursus_americanus
ENSRNOG00000056041	AABR07062570.1	100	74.390	ENSUMAG00000001976	IPO8	94	73.577	Ursus_maritimus
ENSRNOG00000056041	AABR07062570.1	97	64.331	ENSVPAG00000007234	IPO8	92	63.588	Vicugna_pacos
ENSRNOG00000056041	AABR07062570.1	100	76.289	ENSVVUG00000007129	IPO8	93	75.361	Vulpes_vulpes
ENSRNOG00000056041	AABR07062570.1	100	64.153	ENSXETG00000007514	ipo8	99	63.430	Xenopus_tropicalis
ENSRNOG00000056041	AABR07062570.1	100	57.955	ENSXMAG00000008581	ipo8	95	57.538	Xiphophorus_maculatus