EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000056248 (Gene tree)
Gene ID: 170946
Gene Symbol: Marf1
Alias: Lkap
Full Name: meiosis regulator and mRNA stability factor 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 44669 bases
Position: chr10:908806-953474
Accession: 619770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073018	RRM_1	PF00076.22	1e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091520	-	7619	XM_003750779	ENSRNOP00000073018	1735 (aa)	XP_003750827	Q8VIG2

Gene Model

Click here to download ENSRNOG00000056248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000056248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000056248	Marf1	100	99.942	ENSRNOG00000002314	LOC103689943	100	99.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000056248	Marf1	85	57.031	ENSAPOG00000017220	MARF1	99	51.957	Acanthochromis_polyacanthus
ENSRNOG00000056248	Marf1	77	64.981	ENSAOCG00000004791	MARF1	99	59.074	Amphiprion_ocellaris
ENSRNOG00000056248	Marf1	85	56.510	ENSAPEG00000018444	MARF1	99	51.808	Amphiprion_percula
ENSRNOG00000056248	Marf1	100	84.452	ENSCAFG00000018732	MARF1	99	84.452	Canis_familiaris
ENSRNOG00000056248	Marf1	100	84.404	ENSCAFG00020023915	MARF1	99	86.444	Canis_lupus_dingo
ENSRNOG00000056248	Marf1	100	84.138	ENSCCAG00000037176	MARF1	99	87.574	Cebus_capucinus
ENSRNOG00000056248	Marf1	100	75.927	ENSCPBG00000020303	MARF1	99	75.913	Chrysemys_picta_bellii
ENSRNOG00000056248	Marf1	59	45.050	ENSCSAVG00000007612	-	100	45.050	Ciona_savignyi
ENSRNOG00000056248	Marf1	96	65.893	ENSFALG00000014058	MARF1	96	66.310	Ficedula_albicollis
ENSRNOG00000056248	Marf1	85	58.405	ENSGACG00000019162	MARF1	99	58.361	Gasterosteus_aculeatus
ENSRNOG00000056248	Marf1	95	76.605	ENSGAGG00000016091	MARF1	98	76.665	Gopherus_agassizii
ENSRNOG00000056248	Marf1	100	84.280	ENSLAFG00000017524	MARF1	100	84.186	Loxodonta_africana
ENSRNOG00000056248	Marf1	92	88.757	ENSMICG00000014803	MARF1	99	88.757	Microcebus_murinus
ENSRNOG00000056248	Marf1	77	63.281	ENSMALG00000002637	MARF1	99	58.491	Monopterus_albus
ENSRNOG00000056248	Marf1	100	78.722	ENSMLUG00000004374	MARF1	99	78.722	Myotis_lucifugus
ENSRNOG00000056248	Marf1	100	84.830	ENSNGAG00000013574	Marf1	100	84.830	Nannospalax_galili
ENSRNOG00000056248	Marf1	100	74.230	ENSOANG00000005140	-	100	73.738	Ornithorhynchus_anatinus
ENSRNOG00000056248	Marf1	81	56.510	ENSOMEG00000009656	MARF1	78	60.000	Oryzias_melastigma
ENSRNOG00000056248	Marf1	71	73.997	ENSPSIG00000012055	MARF1	99	73.756	Pelodiscus_sinensis
ENSRNOG00000056248	Marf1	78	64.800	ENSPMEG00000016531	MARF1	78	64.914	Poecilia_mexicana
ENSRNOG00000056248	Marf1	100	83.764	ENSSBOG00000024907	MARF1	99	86.745	Saimiri_boliviensis_boliviensis
ENSRNOG00000056248	Marf1	77	65.370	ENSSMAG00000007684	MARF1	84	58.477	Scophthalmus_maximus
ENSRNOG00000056248	Marf1	92	75.984	ENSSPUG00000007333	MARF1	99	75.984	Sphenodon_punctatus
ENSRNOG00000056248	Marf1	100	72.764	ENSTGUG00000005331	MARF1	100	72.764	Taeniopygia_guttata
ENSRNOG00000056248	Marf1	100	81.641	ENSTTRG00000010245	MARF1	99	81.641	Tursiops_truncatus
ENSRNOG00000056248	Marf1	100	84.337	ENSVVUG00000019577	MARF1	99	84.337	Vulpes_vulpes
ENSRNOG00000056248	Marf1	100	64.676	ENSXETG00000005529	marf1	100	64.790	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005777	peroxisome	-	IEA	Component
GO:0005777	peroxisome	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0006302	double-strand break repair	-	ISO	Process
GO:0007143	female meiotic nuclear division	-	ISO	Process
GO:0007143	female meiotic nuclear division	-	ISS	Process
GO:0010468	regulation of gene expression	-	ISO	Process
GO:0010468	regulation of gene expression	-	ISS	Process
GO:0010923	negative regulation of phosphatase activity	-	ISO	Process
GO:0010923	negative regulation of phosphatase activity	-	ISS	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0048477	oogenesis	-	ISO	Process
GO:0048477	oogenesis	-	ISS	Process