EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000056731 (Gene tree)
Gene ID: -
Gene Symbol: AABR07027799.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 1625 bases
Position: chr17:44418972-44420596
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069850	RRM_1	PF00076.22	9.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000077512	AABR07027799.1-201	1625	-	ENSRNOP00000069850	419 (aa)	-	A0A0G2JWE6

Gene Model

Click here to download ENSRNOG00000056731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000056731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000056731	AABR07027799.1	100	99.523	ENSRNOG00000002941	Uhmk1	100	99.523
ENSRNOG00000056731	AABR07027799.1	63	31.224	ENSRNOG00000004362	Rps6ka5	58	31.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSG00000152332	UHMK1	100	99.045	Homo_sapiens
ENSRNOG00000056731	AABR07027799.1	97	71.154	ENSAPOG00000016327	uhmk1	91	71.154	Acanthochromis_polyacanthus
ENSRNOG00000056731	AABR07027799.1	100	96.659	ENSAMEG00000001572	UHMK1	100	96.659	Ailuropoda_melanoleuca
ENSRNOG00000056731	AABR07027799.1	79	78.248	ENSACIG00000010132	uhmk1	97	78.248	Amphilophus_citrinellus
ENSRNOG00000056731	AABR07027799.1	97	70.913	ENSAOCG00000024473	uhmk1	91	70.913	Amphiprion_ocellaris
ENSRNOG00000056731	AABR07027799.1	97	71.394	ENSAPEG00000023193	uhmk1	91	71.394	Amphiprion_percula
ENSRNOG00000056731	AABR07027799.1	97	71.394	ENSATEG00000008282	uhmk1	94	71.394	Anabas_testudineus
ENSRNOG00000056731	AABR07027799.1	79	87.651	ENSAPLG00000014799	UHMK1	100	87.651	Anas_platyrhynchos
ENSRNOG00000056731	AABR07027799.1	96	42.543	ENSACAG00000022003	-	100	42.054	Anolis_carolinensis
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSANAG00000022526	UHMK1	100	99.045	Aotus_nancymaae
ENSRNOG00000056731	AABR07027799.1	97	71.394	ENSACLG00000027096	uhmk1	92	71.394	Astatotilapia_calliptera
ENSRNOG00000056731	AABR07027799.1	98	73.839	ENSAMXG00000037781	uhmk1	93	73.594	Astyanax_mexicanus
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSBTAG00000012694	UHMK1	100	99.284	Bos_taurus
ENSRNOG00000056731	AABR07027799.1	100	98.329	ENSCJAG00000004291	UHMK1	100	98.329	Callithrix_jacchus
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSCAFG00000013095	UHMK1	100	99.284	Canis_familiaris
ENSRNOG00000056731	AABR07027799.1	79	99.394	ENSCAFG00020001672	UHMK1	100	99.394	Canis_lupus_dingo
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSCHIG00000019078	UHMK1	100	99.284	Capra_hircus
ENSRNOG00000056731	AABR07027799.1	99	99.043	ENSTSYG00000011273	UHMK1	91	99.043	Carlito_syrichta
ENSRNOG00000056731	AABR07027799.1	79	73.273	ENSCAPG00000009137	UHMK1	100	73.273	Cavia_aperea
ENSRNOG00000056731	AABR07027799.1	100	97.852	ENSCPOG00000004561	UHMK1	100	97.852	Cavia_porcellus
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSCCAG00000033689	UHMK1	100	99.045	Cebus_capucinus
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSCATG00000037499	UHMK1	100	98.807	Cercocebus_atys
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSCLAG00000004715	-	100	99.284	Chinchilla_lanigera
ENSRNOG00000056731	AABR07027799.1	99	76.978	ENSCLAG00000013603	-	100	76.978	Chinchilla_lanigera
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSCSAG00000002742	UHMK1	100	98.807	Chlorocebus_sabaeus
ENSRNOG00000056731	AABR07027799.1	100	94.988	ENSCHOG00000011101	UHMK1	100	94.988	Choloepus_hoffmanni
ENSRNOG00000056731	AABR07027799.1	69	89.931	ENSCPBG00000017971	UHMK1	100	89.931	Chrysemys_picta_bellii
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSCANG00000032661	UHMK1	100	98.807	Colobus_angolensis_palliatus
ENSRNOG00000056731	AABR07027799.1	100	99.523	ENSCGRG00001013226	Uhmk1	100	99.523	Cricetulus_griseus_chok1gshd
ENSRNOG00000056731	AABR07027799.1	93	97.938	ENSCGRG00000000667	Uhmk1	100	99.394	Cricetulus_griseus_crigri
ENSRNOG00000056731	AABR07027799.1	98	70.702	ENSCSEG00000000806	uhmk1	98	70.702	Cynoglossus_semilaevis
ENSRNOG00000056731	AABR07027799.1	97	70.290	ENSCVAG00000005389	uhmk1	94	70.290	Cyprinodon_variegatus
ENSRNOG00000056731	AABR07027799.1	99	72.048	ENSDARG00000059575	uhmk1	96	72.048	Danio_rerio
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSDNOG00000009922	UHMK1	100	99.284	Dasypus_novemcinctus
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSDORG00000011233	Uhmk1	100	99.284	Dipodomys_ordii
ENSRNOG00000056731	AABR07027799.1	97	45.169	ENSEBUG00000001105	uhmk1	95	45.169	Eptatretus_burgeri
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSECAG00000008744	UHMK1	100	99.284	Equus_caballus
ENSRNOG00000056731	AABR07027799.1	100	82.100	ENSEEUG00000011231	UHMK1	100	82.100	Erinaceus_europaeus
ENSRNOG00000056731	AABR07027799.1	98	70.213	ENSELUG00000003613	uhmk1	99	79.091	Esox_lucius
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSFCAG00000014123	UHMK1	100	99.045	Felis_catus
ENSRNOG00000056731	AABR07027799.1	86	86.704	ENSFALG00000003546	UHMK1	100	86.704	Ficedula_albicollis
ENSRNOG00000056731	AABR07027799.1	99	96.882	ENSFDAG00000011567	UHMK1	100	99.505	Fukomys_damarensis
ENSRNOG00000056731	AABR07027799.1	92	69.898	ENSFHEG00000012818	uhmk1	92	69.898	Fundulus_heteroclitus
ENSRNOG00000056731	AABR07027799.1	96	68.719	ENSGMOG00000016438	uhmk1	99	68.719	Gadus_morhua
ENSRNOG00000056731	AABR07027799.1	99	82.394	ENSGALG00000002734	UHMK1	99	82.864	Gallus_gallus
ENSRNOG00000056731	AABR07027799.1	97	69.880	ENSGAFG00000016341	uhmk1	93	69.880	Gambusia_affinis
ENSRNOG00000056731	AABR07027799.1	99	68.235	ENSGACG00000003529	uhmk1	99	68.150	Gasterosteus_aculeatus
ENSRNOG00000056731	AABR07027799.1	69	90.972	ENSGAGG00000016257	UHMK1	100	90.972	Gopherus_agassizii
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSGGOG00000002032	UHMK1	100	99.045	Gorilla_gorilla
ENSRNOG00000056731	AABR07027799.1	99	71.942	ENSHBUG00000010792	uhmk1	99	71.942	Haplochromis_burtoni
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSHGLG00000004032	UHMK1	100	99.284	Heterocephalus_glaber_female
ENSRNOG00000056731	AABR07027799.1	91	92.428	ENSHGLG00100018664	-	100	92.428	Heterocephalus_glaber_male
ENSRNOG00000056731	AABR07027799.1	97	73.645	ENSIPUG00000005095	uhmk1	94	73.892	Ictalurus_punctatus
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSSTOG00000004265	UHMK1	100	99.045	Ictidomys_tridecemlineatus
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSJJAG00000015993	Uhmk1	100	99.045	Jaculus_jaculus
ENSRNOG00000056731	AABR07027799.1	97	69.951	ENSKMAG00000016748	uhmk1	93	69.951	Kryptolebias_marmoratus
ENSRNOG00000056731	AABR07027799.1	79	77.410	ENSLBEG00000001341	uhmk1	98	77.410	Labrus_bergylta
ENSRNOG00000056731	AABR07027799.1	97	76.413	ENSLACG00000014100	UHMK1	91	76.413	Latimeria_chalumnae
ENSRNOG00000056731	AABR07027799.1	97	75.369	ENSLOCG00000007180	uhmk1	92	75.369	Lepisosteus_oculatus
ENSRNOG00000056731	AABR07027799.1	100	98.091	ENSLAFG00000007405	UHMK1	100	98.091	Loxodonta_africana
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSMFAG00000041742	UHMK1	100	98.807	Macaca_fascicularis
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSMMUG00000019513	UHMK1	100	99.091	Macaca_mulatta
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSMNEG00000004169	UHMK1	100	98.807	Macaca_nemestrina
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSMLEG00000038941	UHMK1	100	98.807	Mandrillus_leucophaeus
ENSRNOG00000056731	AABR07027799.1	97	71.325	ENSMAMG00000007396	uhmk1	91	71.883	Mastacembelus_armatus
ENSRNOG00000056731	AABR07027799.1	97	71.394	ENSMZEG00005011160	uhmk1	92	71.394	Maylandia_zebra
ENSRNOG00000056731	AABR07027799.1	79	87.576	ENSMGAG00000005043	UHMK1	100	87.576	Meleagris_gallopavo
ENSRNOG00000056731	AABR07027799.1	100	99.523	ENSMAUG00000001735	Uhmk1	100	99.523	Mesocricetus_auratus
ENSRNOG00000056731	AABR07027799.1	77	97.222	ENSMICG00000046769	-	98	97.222	Microcebus_murinus
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSMICG00000017256	-	100	99.045	Microcebus_murinus
ENSRNOG00000056731	AABR07027799.1	100	97.625	ENSMOCG00000008369	Uhmk1	100	97.625	Microtus_ochrogaster
ENSRNOG00000056731	AABR07027799.1	79	78.313	ENSMMOG00000006591	uhmk1	99	78.313	Mola_mola
ENSRNOG00000056731	AABR07027799.1	97	70.343	ENSMALG00000013850	uhmk1	97	70.343	Monopterus_albus
ENSRNOG00000056731	AABR07027799.1	100	99.284	MGP_CAROLIEiJ_G0014837	-	100	99.284	Mus_caroli
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSMUSG00000026667	Uhmk1	100	99.284	Mus_musculus
ENSRNOG00000056731	AABR07027799.1	100	99.523	MGP_PahariEiJ_G0028074	Uhmk1	100	99.523	Mus_pahari
ENSRNOG00000056731	AABR07027799.1	100	99.284	MGP_SPRETEiJ_G0015643	-	100	99.284	Mus_spretus
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSMPUG00000003619	UHMK1	100	99.284	Mustela_putorius_furo
ENSRNOG00000056731	AABR07027799.1	100	88.443	ENSMLUG00000002872	UHMK1	100	88.443	Myotis_lucifugus
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSNGAG00000014202	Uhmk1	100	99.394	Nannospalax_galili
ENSRNOG00000056731	AABR07027799.1	79	78.550	ENSNBRG00000016804	uhmk1	99	78.550	Neolamprologus_brichardi
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSNLEG00000026604	UHMK1	100	99.045	Nomascus_leucogenys
ENSRNOG00000056731	AABR07027799.1	75	98.148	ENSOPRG00000001881	-	77	98.246	Ochotona_princeps
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSODEG00000006380	UHMK1	100	99.045	Octodon_degus
ENSRNOG00000056731	AABR07027799.1	97	72.236	ENSONIG00000019209	uhmk1	97	72.236	Oreochromis_niloticus
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSOCUG00000012411	UHMK1	100	99.045	Oryctolagus_cuniculus
ENSRNOG00000056731	AABR07027799.1	99	71.014	ENSORLG00000014340	uhmk1	99	70.773	Oryzias_latipes
ENSRNOG00000056731	AABR07027799.1	99	69.952	ENSORLG00020001220	uhmk1	99	69.712	Oryzias_latipes_hni
ENSRNOG00000056731	AABR07027799.1	97	70.290	ENSORLG00015019846	uhmk1	99	68.227	Oryzias_latipes_hsok
ENSRNOG00000056731	AABR07027799.1	96	70.874	ENSOMEG00000001693	uhmk1	90	70.631	Oryzias_melastigma
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSOGAG00000016110	UHMK1	100	99.045	Otolemur_garnettii
ENSRNOG00000056731	AABR07027799.1	100	95.704	ENSOARG00000010744	UHMK1	100	95.704	Ovis_aries
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSPPAG00000041163	UHMK1	100	99.045	Pan_paniscus
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSPPRG00000002673	UHMK1	100	99.045	Panthera_pardus
ENSRNOG00000056731	AABR07027799.1	79	99.088	ENSPTIG00000010715	UHMK1	100	99.088	Panthera_tigris_altaica
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSPTRG00000001601	UHMK1	100	98.807	Pan_troglodytes
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSPANG00000001321	UHMK1	100	98.807	Papio_anubis
ENSRNOG00000056731	AABR07027799.1	98	74.328	ENSPKIG00000015328	uhmk1	95	74.328	Paramormyrops_kingsleyae
ENSRNOG00000056731	AABR07027799.1	79	84.802	ENSPSIG00000014622	UHMK1	100	84.802	Pelodiscus_sinensis
ENSRNOG00000056731	AABR07027799.1	97	65.764	ENSPMGG00000023620	uhmk1	94	65.764	Periophthalmus_magnuspinnatus
ENSRNOG00000056731	AABR07027799.1	100	99.523	ENSPEMG00000001487	Uhmk1	100	99.523	Peromyscus_maniculatus_bairdii
ENSRNOG00000056731	AABR07027799.1	100	97.136	ENSPCIG00000021507	UHMK1	100	97.136	Phascolarctos_cinereus
ENSRNOG00000056731	AABR07027799.1	97	68.916	ENSPFOG00000015923	uhmk1	93	69.157	Poecilia_formosa
ENSRNOG00000056731	AABR07027799.1	97	69.157	ENSPLAG00000014766	uhmk1	93	69.398	Poecilia_latipinna
ENSRNOG00000056731	AABR07027799.1	97	68.916	ENSPMEG00000023850	uhmk1	93	69.157	Poecilia_mexicana
ENSRNOG00000056731	AABR07027799.1	97	69.398	ENSPREG00000013295	uhmk1	93	69.398	Poecilia_reticulata
ENSRNOG00000056731	AABR07027799.1	100	90.353	ENSPPYG00000000582	UHMK1	100	89.930	Pongo_abelii
ENSRNOG00000056731	AABR07027799.1	100	83.532	ENSPCAG00000000531	UHMK1	100	83.532	Procavia_capensis
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSPCOG00000025540	UHMK1	100	99.045	Propithecus_coquereli
ENSRNOG00000056731	AABR07027799.1	100	97.613	ENSPVAG00000002624	UHMK1	100	97.613	Pteropus_vampyrus
ENSRNOG00000056731	AABR07027799.1	99	71.942	ENSPNYG00000021906	uhmk1	99	71.942	Pundamilia_nyererei
ENSRNOG00000056731	AABR07027799.1	98	73.350	ENSPNAG00000011288	uhmk1	94	73.105	Pygocentrus_nattereri
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSRBIG00000044498	UHMK1	100	99.045	Rhinopithecus_bieti
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSRROG00000031530	UHMK1	100	99.045	Rhinopithecus_roxellana
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSSBOG00000028187	UHMK1	100	99.045	Saimiri_boliviensis_boliviensis
ENSRNOG00000056731	AABR07027799.1	100	94.537	ENSSHAG00000012358	UHMK1	100	94.537	Sarcophilus_harrisii
ENSRNOG00000056731	AABR07027799.1	97	75.616	ENSSFOG00015002013	uhmk1	93	75.616	Scleropages_formosus
ENSRNOG00000056731	AABR07027799.1	97	71.635	ENSSMAG00000003891	uhmk1	92	71.635	Scophthalmus_maximus
ENSRNOG00000056731	AABR07027799.1	97	72.115	ENSSDUG00000000226	uhmk1	92	72.115	Seriola_dumerili
ENSRNOG00000056731	AABR07027799.1	97	72.115	ENSSLDG00000000833	uhmk1	92	72.115	Seriola_lalandi_dorsalis
ENSRNOG00000056731	AABR07027799.1	99	82.227	ENSSPUG00000005763	UHMK1	99	82.270	Sphenodon_punctatus
ENSRNOG00000056731	AABR07027799.1	97	71.875	ENSSPAG00000001165	uhmk1	99	65.871	Stegastes_partitus
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSSSCG00000006342	UHMK1	100	99.284	Sus_scrofa
ENSRNOG00000056731	AABR07027799.1	83	87.644	ENSTGUG00000017148	UHMK1	100	87.644	Taeniopygia_guttata
ENSRNOG00000056731	AABR07027799.1	96	69.565	ENSTRUG00000022479	uhmk1	92	69.565	Takifugu_rubripes
ENSRNOG00000056731	AABR07027799.1	97	70.443	ENSTNIG00000010802	uhmk1	99	70.443	Tetraodon_nigroviridis
ENSRNOG00000056731	AABR07027799.1	100	99.045	ENSTBEG00000017334	UHMK1	100	99.045	Tupaia_belangeri
ENSRNOG00000056731	AABR07027799.1	100	99.284	ENSUAMG00000027426	UHMK1	100	99.284	Ursus_americanus
ENSRNOG00000056731	AABR07027799.1	87	96.164	ENSUMAG00000022774	UHMK1	84	96.164	Ursus_maritimus
ENSRNOG00000056731	AABR07027799.1	100	98.807	ENSVPAG00000010726	UHMK1	100	98.807	Vicugna_pacos
ENSRNOG00000056731	AABR07027799.1	99	99.034	ENSVVUG00000009990	UHMK1	100	99.272	Vulpes_vulpes
ENSRNOG00000056731	AABR07027799.1	79	76.900	ENSXCOG00000005880	uhmk1	97	76.900	Xiphophorus_couchianus
ENSRNOG00000056731	AABR07027799.1	97	69.398	ENSXMAG00000016056	uhmk1	93	69.398	Xiphophorus_maculatus