EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000056748 (Gene tree)
Gene ID: -
Gene Symbol: AC229945.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 5210 bases
Position: chr5:79893845-79899054
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000064593	RVT_1	PF00078.27	2.1e-54	1	1
ENSRNOP00000064593	Transposase_22	PF02994.14	1.9e-45	1	1
ENSRNOP00000064593	Exo_endo_phos	PF03372.23	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074379	AC229945.1-201	4821	-	ENSRNOP00000064593	1607 (aa)	-	M0R5C9

Gene Model

Click here to download ENSRNOG00000056748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000056748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000056748	AC229945.1	100	98.010	ENSRNOG00000049504	AABR07009221.1	94	98.010
ENSRNOG00000056748	AC229945.1	58	92.432	ENSRNOG00000034030	AC130162.1	71	92.432
ENSRNOG00000056748	AC229945.1	100	98.072	ENSRNOG00000060742	AABR07029809.1	99	98.072
ENSRNOG00000056748	AC229945.1	50	94.549	ENSRNOG00000055486	AABR07025316.1	99	94.549
ENSRNOG00000056748	AC229945.1	100	98.198	ENSRNOG00000059691	AABR07033318.1	94	98.198
ENSRNOG00000056748	AC229945.1	100	98.134	ENSRNOG00000058209	AABR07063893.1	99	98.134
ENSRNOG00000056748	AC229945.1	62	98.649	ENSRNOG00000057039	AC124874.1	92	98.649
ENSRNOG00000056748	AC229945.1	59	93.995	ENSRNOG00000060618	AABR07027267.1	69	98.895
ENSRNOG00000056748	AC229945.1	55	95.334	ENSRNOG00000005861	Hsd11b1	78	95.334
ENSRNOG00000056748	AC229945.1	100	97.641	ENSRNOG00000059133	AABR07020537.1	97	97.641
ENSRNOG00000056748	AC229945.1	100	98.321	ENSRNOG00000047294	AABR07043115.1	99	98.321
ENSRNOG00000056748	AC229945.1	100	97.578	ENSRNOG00000056033	AC111632.2	97	97.578
ENSRNOG00000056748	AC229945.1	100	98.383	ENSRNOG00000054519	AABR07053179.1	94	98.383
ENSRNOG00000056748	AC229945.1	58	93.298	ENSRNOG00000045583	AABR07002068.1	69	98.295
ENSRNOG00000056748	AC229945.1	58	93.298	ENSRNOG00000058277	AC080157.1	69	98.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000056748	AC229945.1	73	63.342	ENSBTAG00000050912	-	92	63.342	Bos_taurus
ENSRNOG00000056748	AC229945.1	53	64.671	ENSBTAG00000050251	-	99	64.671	Bos_taurus
ENSRNOG00000056748	AC229945.1	69	63.252	ENSBTAG00000053324	-	93	63.252	Bos_taurus
ENSRNOG00000056748	AC229945.1	71	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000056748	AC229945.1	53	65.217	ENSBTAG00000054826	-	98	65.217	Bos_taurus
ENSRNOG00000056748	AC229945.1	73	63.432	ENSBTAG00000053316	-	92	63.432	Bos_taurus
ENSRNOG00000056748	AC229945.1	53	65.192	ENSBTAG00000051999	-	99	65.192	Bos_taurus
ENSRNOG00000056748	AC229945.1	73	63.252	ENSBTAG00000051842	-	92	63.465	Bos_taurus
ENSRNOG00000056748	AC229945.1	63	64.012	ENSBTAG00000054392	-	97	64.012	Bos_taurus
ENSRNOG00000056748	AC229945.1	53	65.217	ENSBTAG00000051119	-	98	65.217	Bos_taurus
ENSRNOG00000056748	AC229945.1	65	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000056748	AC229945.1	64	63.863	ENSBTAG00000054175	-	91	63.863	Bos_taurus
ENSRNOG00000056748	AC229945.1	58	65.480	ENSBTAG00000055052	-	99	65.480	Bos_taurus
ENSRNOG00000056748	AC229945.1	73	63.252	ENSBTAG00000050965	-	92	63.252	Bos_taurus
ENSRNOG00000056748	AC229945.1	50	66.049	ENSBTAG00000052047	-	100	66.049	Bos_taurus
ENSRNOG00000056748	AC229945.1	67	64.012	ENSBTAG00000049055	-	92	64.012	Bos_taurus
ENSRNOG00000056748	AC229945.1	55	65.727	ENSBTAG00000049728	-	99	65.727	Bos_taurus
ENSRNOG00000056748	AC229945.1	64	64.278	ENSBTAG00000050534	-	91	64.278	Bos_taurus
ENSRNOG00000056748	AC229945.1	69	63.522	ENSBTAG00000051208	-	92	63.522	Bos_taurus
ENSRNOG00000056748	AC229945.1	73	63.522	ENSBTAG00000049649	-	92	63.522	Bos_taurus
ENSRNOG00000056748	AC229945.1	55	65.193	ENSBTAG00000051121	-	99	65.193	Bos_taurus
ENSRNOG00000056748	AC229945.1	53	67.219	ENSBTAG00000052305	-	89	67.219	Bos_taurus
ENSRNOG00000056748	AC229945.1	73	63.342	ENSBTAG00000050847	-	92	63.342	Bos_taurus
ENSRNOG00000056748	AC229945.1	56	66.029	ENSCHIG00000008419	-	90	66.029	Capra_hircus
ENSRNOG00000056748	AC229945.1	54	66.209	ENSCHIG00000008599	-	90	66.209	Capra_hircus
ENSRNOG00000056748	AC229945.1	73	75.135	ENSCGRG00000019476	-	92	75.135	Cricetulus_griseus_crigri
ENSRNOG00000056748	AC229945.1	73	75.135	ENSCGRG00000019173	-	92	75.135	Cricetulus_griseus_crigri
ENSRNOG00000056748	AC229945.1	68	75.435	ENSCGRG00000019462	-	92	75.435	Cricetulus_griseus_crigri
ENSRNOG00000056748	AC229945.1	69	75.135	ENSCGRG00000018650	-	89	75.135	Cricetulus_griseus_crigri
ENSRNOG00000056748	AC229945.1	73	75.135	ENSCGRG00000018654	-	92	75.135	Cricetulus_griseus_crigri
ENSRNOG00000056748	AC229945.1	65	64.336	ENSOCUG00000029721	-	91	64.336	Oryctolagus_cuniculus
ENSRNOG00000056748	AC229945.1	65	62.715	ENSOCUG00000029631	-	99	62.715	Oryctolagus_cuniculus
ENSRNOG00000056748	AC229945.1	73	63.342	ENSOARG00000010889	-	92	63.555	Ovis_aries
ENSRNOG00000056748	AC229945.1	58	63.079	ENSOARG00000011096	-	84	63.079	Ovis_aries
ENSRNOG00000056748	AC229945.1	67	63.717	ENSOARG00000005813	-	92	63.717	Ovis_aries
ENSRNOG00000056748	AC229945.1	67	63.663	ENSOARG00000008210	-	89	63.663	Ovis_aries
ENSRNOG00000056748	AC229945.1	73	63.465	ENSOARG00000000057	-	92	63.465	Ovis_aries
ENSRNOG00000056748	AC229945.1	73	63.465	ENSOARG00000001175	-	92	63.465	Ovis_aries
ENSRNOG00000056748	AC229945.1	51	67.102	ENSOARG00000006683	-	88	67.102	Ovis_aries
ENSRNOG00000056748	AC229945.1	51	65.296	ENSSSCG00000037083	-	99	65.296	Sus_scrofa
ENSRNOG00000056748	AC229945.1	73	65.574	ENSSSCG00000040939	-	92	65.574	Sus_scrofa
ENSRNOG00000056748	AC229945.1	55	64.706	ENSSSCG00000035697	-	91	64.706	Sus_scrofa
ENSRNOG00000056748	AC229945.1	73	63.849	ENSSSCG00000039414	-	92	63.849	Sus_scrofa
ENSRNOG00000056748	AC229945.1	69	63.759	ENSSSCG00000036442	-	95	63.759	Sus_scrofa
ENSRNOG00000056748	AC229945.1	54	66.378	ENSSSCG00000040911	-	88	66.378	Sus_scrofa