EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000056983 (Gene tree)
Gene ID: 309275
Gene Symbol: Trex2
Alias: LOC309275|RGD1562245
Full Name: three prime repair exonuclease 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1609 bases
Position: chrX:157374305-157375913
Accession: 1562245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000075461	RNase_T	PF00929.24	4.1e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000081973	-	985	-	ENSRNOP00000075461	236 (aa)	-	D4A3I6

Gene Model

Click here to download ENSRNOG00000056983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000056983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000056983	Trex2	100	85.169	ENSAMEG00000008933	TREX2	85	85.169	Ailuropoda_melanoleuca
ENSRNOG00000056983	Trex2	93	45.740	ENSACAG00000008936	TREX1	93	45.740	Anolis_carolinensis
ENSRNOG00000056983	Trex2	99	51.477	ENSACAG00000012912	TREX2	99	51.477	Anolis_carolinensis
ENSRNOG00000056983	Trex2	100	84.746	ENSCAFG00000019185	TREX2	85	84.746	Canis_familiaris
ENSRNOG00000056983	Trex2	95	84.444	ENSCAFG00020023190	TREX2	72	84.444	Canis_lupus_dingo
ENSRNOG00000056983	Trex2	100	88.136	ENSCAPG00000004768	TREX2	88	88.136	Cavia_aperea
ENSRNOG00000056983	Trex2	100	88.559	ENSCPOG00000025702	TREX2	100	88.559	Cavia_porcellus
ENSRNOG00000056983	Trex2	100	87.288	ENSCLAG00000002698	TREX2	100	87.288	Chinchilla_lanigera
ENSRNOG00000056983	Trex2	97	53.070	ENSCPBG00000008273	TREX2	82	53.070	Chrysemys_picta_bellii
ENSRNOG00000056983	Trex2	100	95.763	ENSCGRG00001012110	Trex2	100	95.763	Cricetulus_griseus_chok1gshd
ENSRNOG00000056983	Trex2	86	30.000	ENSDARG00000093773	si:ch1073-296i8.2	77	30.000	Danio_rerio
ENSRNOG00000056983	Trex2	95	43.363	ENSDORG00000016464	Trex1	74	43.363	Dipodomys_ordii
ENSRNOG00000056983	Trex2	91	38.182	ENSEBUG00000006412	TREX1	84	38.182	Eptatretus_burgeri
ENSRNOG00000056983	Trex2	100	84.322	ENSEASG00005019558	TREX2	86	84.322	Equus_asinus_asinus
ENSRNOG00000056983	Trex2	100	83.898	ENSECAG00000016012	TREX2	86	83.898	Equus_caballus
ENSRNOG00000056983	Trex2	100	83.475	ENSFCAG00000018938	TREX2	100	83.475	Felis_catus
ENSRNOG00000056983	Trex2	100	87.288	ENSFDAG00000014463	TREX2	100	87.288	Fukomys_damarensis
ENSRNOG00000056983	Trex2	100	91.102	ENSHGLG00000008010	TREX2	100	91.102	Heterocephalus_glaber_female
ENSRNOG00000056983	Trex2	100	91.102	ENSHGLG00100011918	TREX2	100	91.102	Heterocephalus_glaber_male
ENSRNOG00000056983	Trex2	100	90.254	ENSSTOG00000027213	TREX2	100	90.254	Ictidomys_tridecemlineatus
ENSRNOG00000056983	Trex2	100	91.949	ENSJJAG00000012484	Trex2	100	91.949	Jaculus_jaculus
ENSRNOG00000056983	Trex2	96	45.374	ENSLACG00000000797	-	90	45.374	Latimeria_chalumnae
ENSRNOG00000056983	Trex2	100	94.915	ENSMOCG00000001305	Trex2	100	94.915	Microtus_ochrogaster
ENSRNOG00000056983	Trex2	97	69.869	ENSMODG00000022848	-	95	69.869	Monodelphis_domestica
ENSRNOG00000056983	Trex2	97	70.742	ENSMODG00000025322	-	95	70.742	Monodelphis_domestica
ENSRNOG00000056983	Trex2	100	96.610	MGP_CAROLIEiJ_G0033149	Trex2	100	96.610	Mus_caroli
ENSRNOG00000056983	Trex2	100	96.186	ENSMUSG00000031372	Trex2	100	96.186	Mus_musculus
ENSRNOG00000056983	Trex2	100	95.763	MGP_PahariEiJ_G0031692	Trex2	100	95.763	Mus_pahari
ENSRNOG00000056983	Trex2	100	96.186	MGP_SPRETEiJ_G0034304	Trex2	100	96.186	Mus_spretus
ENSRNOG00000056983	Trex2	100	85.593	ENSMPUG00000019552	TREX2	100	85.593	Mustela_putorius_furo
ENSRNOG00000056983	Trex2	99	86.809	ENSMLUG00000027143	TREX2	99	86.809	Myotis_lucifugus
ENSRNOG00000056983	Trex2	95	69.912	ENSMEUG00000016646	TREX2	100	69.912	Notamacropus_eugenii
ENSRNOG00000056983	Trex2	100	87.288	ENSODEG00000019142	TREX2	91	87.288	Octodon_degus
ENSRNOG00000056983	Trex2	97	67.105	ENSOANG00000000686	TREX2	97	67.105	Ornithorhynchus_anatinus
ENSRNOG00000056983	Trex2	100	84.746	ENSOGAG00000033175	TREX2	93	84.746	Otolemur_garnettii
ENSRNOG00000056983	Trex2	100	83.898	ENSPPRG00000017457	TREX2	100	83.898	Panthera_pardus
ENSRNOG00000056983	Trex2	89	52.133	ENSPSIG00000006116	TREX2	87	52.133	Pelodiscus_sinensis
ENSRNOG00000056983	Trex2	100	94.068	ENSPEMG00000004918	Trex2	100	94.068	Peromyscus_maniculatus_bairdii
ENSRNOG00000056983	Trex2	99	69.915	ENSPCIG00000009700	TREX2	99	69.915	Phascolarctos_cinereus
ENSRNOG00000056983	Trex2	100	84.746	ENSPCAG00000005411	TREX2	91	84.746	Procavia_capensis
ENSRNOG00000056983	Trex2	99	89.787	ENSPVAG00000001122	TREX2	85	89.787	Pteropus_vampyrus
ENSRNOG00000056983	Trex2	96	69.737	ENSSHAG00000004059	TREX2	95	69.737	Sarcophilus_harrisii
ENSRNOG00000056983	Trex2	92	54.795	ENSSPUG00000012485	-	89	54.795	Sphenodon_punctatus
ENSRNOG00000056983	Trex2	92	54.795	ENSSPUG00000012477	-	89	54.795	Sphenodon_punctatus
ENSRNOG00000056983	Trex2	92	54.795	ENSSPUG00000012496	-	87	54.795	Sphenodon_punctatus
ENSRNOG00000056983	Trex2	92	52.000	ENSSPUG00000015575	-	92	52.000	Sphenodon_punctatus
ENSRNOG00000056983	Trex2	92	54.795	ENSSPUG00000012467	-	89	54.795	Sphenodon_punctatus
ENSRNOG00000056983	Trex2	99	85.532	ENSUAMG00000027544	TREX2	88	85.532	Ursus_americanus
ENSRNOG00000056983	Trex2	100	84.322	ENSVVUG00000029714	TREX2	89	84.322	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006259	DNA metabolic process	-	ISO	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0008296	3'-5'-exodeoxyribonuclease activity	21873635.	IBA	Function
GO:0008296	3'-5'-exodeoxyribonuclease activity	-	ISO	Function
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process