EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000057619 (Gene tree)
Gene ID: -
Gene Symbol: LOC100912068
Alias: -
Full Name: hypermethylated in cancer 1 protein-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 2576 bases
Position: chr10:62480767-62483342
Accession: 6488990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074161	zf-C2H2	PF00096.26	2.5e-24	1	4
ENSRNOP00000074161	zf-C2H2	PF00096.26	2.5e-24	2	4
ENSRNOP00000074161	zf-C2H2	PF00096.26	2.5e-24	3	4
ENSRNOP00000074161	zf-C2H2	PF00096.26	2.5e-24	4	4
ENSRNOP00000074161	zf-met	PF12874.7	8.6e-10	1	2
ENSRNOP00000074161	zf-met	PF12874.7	8.6e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079956	-	2220	XM_003750862	ENSRNOP00000074161	740 (aa)	XP_003750910	A0A0G2K7D6

Gene Model

Click here to download ENSRNOG00000057619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000057619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000057619	LOC100912068	72	100.000	ENSRNOG00000046405	Hic1	99	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000057619	LOC100912068	100	92.027	ENSG00000177374	HIC1	100	98.810	Homo_sapiens
ENSRNOG00000057619	LOC100912068	98	47.535	ENSAPOG00000020900	hic1	85	52.510	Acanthochromis_polyacanthus
ENSRNOG00000057619	LOC100912068	69	97.917	ENSAMEG00000007657	HIC1	77	97.917	Ailuropoda_melanoleuca
ENSRNOG00000057619	LOC100912068	98	47.625	ENSAOCG00000023291	hic1	84	52.510	Amphiprion_ocellaris
ENSRNOG00000057619	LOC100912068	79	73.723	ENSAPEG00000008510	hic1	76	73.529	Amphiprion_percula
ENSRNOG00000057619	LOC100912068	100	88.124	ENSANAG00000037442	HIC1	99	88.220	Aotus_nancymaae
ENSRNOG00000057619	LOC100912068	98	48.689	ENSAMXG00000024869	hic1	97	47.215	Astyanax_mexicanus
ENSRNOG00000057619	LOC100912068	100	92.297	ENSBTAG00000025130	HIC1	99	92.059	Bos_taurus
ENSRNOG00000057619	LOC100912068	100	91.081	ENSCJAG00000042739	HIC1	99	91.081	Callithrix_jacchus
ENSRNOG00000057619	LOC100912068	100	91.486	ENSCAFG00000019257	HIC1	99	91.252	Canis_familiaris
ENSRNOG00000057619	LOC100912068	97	91.401	ENSCAFG00020009802	HIC1	99	91.160	Canis_lupus_dingo
ENSRNOG00000057619	LOC100912068	100	92.568	ENSCHIG00000015829	HIC1	99	92.328	Capra_hircus
ENSRNOG00000057619	LOC100912068	69	96.491	ENSTSYG00000032991	HIC1	99	96.491	Carlito_syrichta
ENSRNOG00000057619	LOC100912068	100	90.541	ENSCPOG00000020382	HIC1	99	90.135	Cavia_porcellus
ENSRNOG00000057619	LOC100912068	100	90.541	ENSCCAG00000030944	HIC1	99	90.310	Cebus_capucinus
ENSRNOG00000057619	LOC100912068	100	91.757	ENSCATG00000037347	HIC1	99	91.521	Cercocebus_atys
ENSRNOG00000057619	LOC100912068	100	91.622	ENSCLAG00000008072	HIC1	99	90.811	Chinchilla_lanigera
ENSRNOG00000057619	LOC100912068	100	91.892	ENSCSAG00000013805	HIC1	99	91.655	Chlorocebus_sabaeus
ENSRNOG00000057619	LOC100912068	89	58.222	ENSCPBG00000000255	HIC1	97	57.122	Chrysemys_picta_bellii
ENSRNOG00000057619	LOC100912068	100	94.730	ENSCGRG00001018912	Hic1	99	94.872	Cricetulus_griseus_chok1gshd
ENSRNOG00000057619	LOC100912068	100	90.000	ENSCGRG00000008158	Hic1	99	90.405	Cricetulus_griseus_crigri
ENSRNOG00000057619	LOC100912068	98	47.066	ENSCSEG00000013032	hic1	81	50.704	Cynoglossus_semilaevis
ENSRNOG00000057619	LOC100912068	98	90.797	ENSDNOG00000049226	HIC1	93	90.797	Dasypus_novemcinctus
ENSRNOG00000057619	LOC100912068	68	98.343	ENSDORG00000027749	Hic1	62	98.343	Dipodomys_ordii
ENSRNOG00000057619	LOC100912068	97	91.678	ENSEASG00005009326	HIC1	99	90.884	Equus_asinus_asinus
ENSRNOG00000057619	LOC100912068	100	91.486	ENSECAG00000030580	HIC1	99	90.713	Equus_caballus
ENSRNOG00000057619	LOC100912068	98	47.537	ENSELUG00000001329	hic1	52	51.270	Esox_lucius
ENSRNOG00000057619	LOC100912068	100	92.162	ENSFCAG00000025756	HIC1	99	91.925	Felis_catus
ENSRNOG00000057619	LOC100912068	96	59.115	ENSFALG00000006543	HIC1	99	57.392	Ficedula_albicollis
ENSRNOG00000057619	LOC100912068	60	96.308	ENSFDAG00000021489	HIC1	77	94.462	Fukomys_damarensis
ENSRNOG00000057619	LOC100912068	97	60.594	ENSGALG00000042077	HIC1	98	59.333	Gallus_gallus
ENSRNOG00000057619	LOC100912068	98	57.739	ENSGAGG00000025616	HIC1	97	56.383	Gopherus_agassizii
ENSRNOG00000057619	LOC100912068	87	98.113	ENSGGOG00000027584	HIC1	99	98.113	Gorilla_gorilla
ENSRNOG00000057619	LOC100912068	100	90.811	ENSHGLG00000012044	HIC1	99	90.405	Heterocephalus_glaber_female
ENSRNOG00000057619	LOC100912068	67	97.183	ENSHGLG00100013587	HIC1	78	97.183	Heterocephalus_glaber_male
ENSRNOG00000057619	LOC100912068	98	48.808	ENSHCOG00000001420	hic1	97	46.038	Hippocampus_comes
ENSRNOG00000057619	LOC100912068	98	48.692	ENSIPUG00000004604	hic1	97	48.473	Ictalurus_punctatus
ENSRNOG00000057619	LOC100912068	100	92.194	ENSSTOG00000011792	HIC1	99	92.328	Ictidomys_tridecemlineatus
ENSRNOG00000057619	LOC100912068	100	93.243	ENSJJAG00000017367	Hic1	99	93.378	Jaculus_jaculus
ENSRNOG00000057619	LOC100912068	98	48.990	ENSLBEG00000021810	hic1	51	48.832	Labrus_bergylta
ENSRNOG00000057619	LOC100912068	98	54.679	ENSLACG00000007028	HIC1	97	53.711	Latimeria_chalumnae
ENSRNOG00000057619	LOC100912068	79	62.534	ENSLOCG00000006478	hic1	89	61.864	Lepisosteus_oculatus
ENSRNOG00000057619	LOC100912068	99	84.110	ENSLAFG00000001259	HIC1	99	82.225	Loxodonta_africana
ENSRNOG00000057619	LOC100912068	100	91.892	ENSMFAG00000044684	HIC1	99	91.655	Macaca_fascicularis
ENSRNOG00000057619	LOC100912068	97	91.678	ENSMMUG00000048710	HIC1	99	91.436	Macaca_mulatta
ENSRNOG00000057619	LOC100912068	100	91.892	ENSMNEG00000013172	HIC1	99	91.655	Macaca_nemestrina
ENSRNOG00000057619	LOC100912068	98	49.434	ENSMAMG00000017930	hic1	84	52.896	Mastacembelus_armatus
ENSRNOG00000057619	LOC100912068	74	70.746	ENSMGAG00000005397	HIC1	93	72.000	Meleagris_gallopavo
ENSRNOG00000057619	LOC100912068	100	95.000	ENSMAUG00000019881	Hic1	99	95.135	Mesocricetus_auratus
ENSRNOG00000057619	LOC100912068	100	91.757	ENSMICG00000012908	HIC1	99	91.521	Microcebus_murinus
ENSRNOG00000057619	LOC100912068	100	91.351	ENSMOCG00000001275	Hic1	99	91.486	Microtus_ochrogaster
ENSRNOG00000057619	LOC100912068	100	60.185	ENSMODG00000010600	HIC1	99	69.048	Monodelphis_domestica
ENSRNOG00000057619	LOC100912068	98	95.192	MGP_CAROLIEiJ_G0016730	-	81	95.330	Mus_caroli
ENSRNOG00000057619	LOC100912068	98	95.467	ENSMUSG00000043099	Hic1	81	95.604	Mus_musculus
ENSRNOG00000057619	LOC100912068	98	94.093	MGP_SPRETEiJ_G0017573	Hic1	99	94.730	Mus_spretus
ENSRNOG00000057619	LOC100912068	97	91.401	ENSMPUG00000019502	HIC1	99	91.160	Mustela_putorius_furo
ENSRNOG00000057619	LOC100912068	89	90.000	ENSMLUG00000010527	HIC1	99	92.857	Myotis_lucifugus
ENSRNOG00000057619	LOC100912068	100	92.359	ENSNGAG00000020689	Hic1	99	92.493	Nannospalax_galili
ENSRNOG00000057619	LOC100912068	67	95.190	ENSNLEG00000035047	-	80	95.190	Nomascus_leucogenys
ENSRNOG00000057619	LOC100912068	98	90.784	ENSODEG00000007964	HIC1	99	90.371	Octodon_degus
ENSRNOG00000057619	LOC100912068	98	47.007	ENSORLG00000029930	hic1	51	51.294	Oryzias_latipes
ENSRNOG00000057619	LOC100912068	98	46.683	ENSORLG00020008812	hic1	83	54.331	Oryzias_latipes_hni
ENSRNOG00000057619	LOC100912068	98	46.806	ENSORLG00015000406	hic1	83	54.902	Oryzias_latipes_hsok
ENSRNOG00000057619	LOC100912068	98	47.434	ENSOMEG00000004793	hic1	84	53.488	Oryzias_melastigma
ENSRNOG00000057619	LOC100912068	100	92.027	ENSOGAG00000034845	HIC1	99	92.027	Otolemur_garnettii
ENSRNOG00000057619	LOC100912068	100	92.162	ENSPPRG00000013038	HIC1	99	91.925	Panthera_pardus
ENSRNOG00000057619	LOC100912068	100	92.027	ENSPTRG00000047506	HIC1	99	91.790	Pan_troglodytes
ENSRNOG00000057619	LOC100912068	85	86.963	ENSPANG00000024595	HIC1	95	87.785	Papio_anubis
ENSRNOG00000057619	LOC100912068	78	59.583	ENSPKIG00000013932	hic1	73	57.917	Paramormyrops_kingsleyae
ENSRNOG00000057619	LOC100912068	75	57.739	ENSPSIG00000007902	HIC1	94	57.326	Pelodiscus_sinensis
ENSRNOG00000057619	LOC100912068	98	48.790	ENSPMGG00000011581	hic1	98	46.820	Periophthalmus_magnuspinnatus
ENSRNOG00000057619	LOC100912068	100	94.730	ENSPEMG00000021229	Hic1	99	94.865	Peromyscus_maniculatus_bairdii
ENSRNOG00000057619	LOC100912068	100	75.357	ENSPCIG00000019061	HIC1	99	76.172	Phascolarctos_cinereus
ENSRNOG00000057619	LOC100912068	98	48.359	ENSPFOG00000004471	hic1	83	50.230	Poecilia_formosa
ENSRNOG00000057619	LOC100912068	98	48.608	ENSPLAG00000022329	hic1	83	50.694	Poecilia_latipinna
ENSRNOG00000057619	LOC100912068	98	48.354	ENSPMEG00000004584	hic1	84	50.230	Poecilia_mexicana
ENSRNOG00000057619	LOC100912068	98	48.485	ENSPREG00000010341	hic1	84	51.172	Poecilia_reticulata
ENSRNOG00000057619	LOC100912068	86	96.753	ENSPPYG00000007789	HIC1	99	95.031	Pongo_abelii
ENSRNOG00000057619	LOC100912068	69	96.884	ENSPCAG00000000535	HIC1	70	96.884	Procavia_capensis
ENSRNOG00000057619	LOC100912068	100	91.486	ENSPCOG00000023965	HIC1	99	91.252	Propithecus_coquereli
ENSRNOG00000057619	LOC100912068	100	91.757	ENSPVAG00000002158	HIC1	99	91.521	Pteropus_vampyrus
ENSRNOG00000057619	LOC100912068	99	52.828	ENSPNAG00000001133	hic1	99	49.740	Pygocentrus_nattereri
ENSRNOG00000057619	LOC100912068	100	91.757	ENSRROG00000031780	HIC1	99	91.521	Rhinopithecus_roxellana
ENSRNOG00000057619	LOC100912068	94	48.758	ENSSFOG00015004559	hic1	94	47.089	Scleropages_formosus
ENSRNOG00000057619	LOC100912068	98	46.731	ENSSFOG00015005452	hic1	82	53.516	Scleropages_formosus
ENSRNOG00000057619	LOC100912068	98	48.489	ENSSMAG00000009823	hic1	83	53.725	Scophthalmus_maximus
ENSRNOG00000057619	LOC100912068	98	48.557	ENSSLDG00000002022	hic1	84	52.124	Seriola_lalandi_dorsalis
ENSRNOG00000057619	LOC100912068	59	98.333	ENSSARG00000010162	-	58	98.333	Sorex_araneus
ENSRNOG00000057619	LOC100912068	98	56.676	ENSSPUG00000007168	HIC1	97	53.981	Sphenodon_punctatus
ENSRNOG00000057619	LOC100912068	100	91.768	ENSSSCG00000025717	HIC1	99	89.919	Sus_scrofa
ENSRNOG00000057619	LOC100912068	99	60.800	ENSTGUG00000005835	HIC1	99	59.813	Taeniopygia_guttata
ENSRNOG00000057619	LOC100912068	97	91.956	ENSUAMG00000025149	HIC1	99	91.713	Ursus_americanus
ENSRNOG00000057619	LOC100912068	97	91.401	ENSVVUG00000021725	HIC1	99	91.160	Vulpes_vulpes
ENSRNOG00000057619	LOC100912068	97	59.109	ENSXETG00000023803	hic1	99	57.760	Xenopus_tropicalis
ENSRNOG00000057619	LOC100912068	97	48.550	ENSXCOG00000009641	hic1	86	50.394	Xiphophorus_couchianus
ENSRNOG00000057619	LOC100912068	98	48.040	ENSXMAG00000023343	hic1	84	50.391	Xiphophorus_maculatus