EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000057622 (Gene tree)
Gene ID: 680581
Gene Symbol: Rbm41
Alias: LOC680581
Full Name: RNA binding motif protein 41
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 55697 bases
Position: chrX:111269490-111325186
Accession: 1590579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069686	RRM_1	PF00076.22	2.2e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000086785	-	5572	-	ENSRNOP00000069686	413 (aa)	-	D3ZTA4

Gene Model

Click here to download ENSRNOG00000057622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000057622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000057622	Rbm41	100	88.378	ENSG00000089682	RBM41	100	88.378	Homo_sapiens
ENSRNOG00000057622	Rbm41	99	88.078	ENSAMEG00000010490	RBM41	99	88.078	Ailuropoda_melanoleuca
ENSRNOG00000057622	Rbm41	93	40.371	ENSACIG00000014038	rbm41	96	40.046	Amphilophus_citrinellus
ENSRNOG00000057622	Rbm41	90	40.957	ENSAOCG00000020927	rbm41	93	40.576	Amphiprion_ocellaris
ENSRNOG00000057622	Rbm41	90	40.957	ENSAPEG00000001223	rbm41	93	40.576	Amphiprion_percula
ENSRNOG00000057622	Rbm41	91	39.683	ENSATEG00000022968	rbm41	97	36.659	Anabas_testudineus
ENSRNOG00000057622	Rbm41	86	41.579	ENSACAG00000014146	RBM41	80	42.895	Anolis_carolinensis
ENSRNOG00000057622	Rbm41	99	86.829	ENSANAG00000037624	RBM41	97	86.829	Aotus_nancymaae
ENSRNOG00000057622	Rbm41	93	39.631	ENSACLG00000024125	rbm41	97	39.130	Astatotilapia_calliptera
ENSRNOG00000057622	Rbm41	98	37.665	ENSAMXG00000007109	rbm41	99	36.807	Astyanax_mexicanus
ENSRNOG00000057622	Rbm41	100	87.409	ENSBTAG00000000955	RBM41	100	87.409	Bos_taurus
ENSRNOG00000057622	Rbm41	100	86.683	ENSCJAG00000007957	RBM41	100	86.683	Callithrix_jacchus
ENSRNOG00000057622	Rbm41	99	88.321	ENSCAFG00000017959	RBM41	99	88.321	Canis_familiaris
ENSRNOG00000057622	Rbm41	99	88.206	ENSCAFG00020006764	RBM41	98	88.206	Canis_lupus_dingo
ENSRNOG00000057622	Rbm41	100	87.409	ENSCHIG00000015945	RBM41	100	87.409	Capra_hircus
ENSRNOG00000057622	Rbm41	100	87.409	ENSTSYG00000006980	RBM41	100	87.409	Carlito_syrichta
ENSRNOG00000057622	Rbm41	100	84.988	ENSCPOG00000025052	RBM41	100	84.988	Cavia_porcellus
ENSRNOG00000057622	Rbm41	100	87.167	ENSCCAG00000028014	RBM41	100	87.167	Cebus_capucinus
ENSRNOG00000057622	Rbm41	100	87.409	ENSCATG00000020042	RBM41	100	87.409	Cercocebus_atys
ENSRNOG00000057622	Rbm41	100	84.504	ENSCLAG00000002330	RBM41	100	84.504	Chinchilla_lanigera
ENSRNOG00000057622	Rbm41	98	83.411	ENSCSAG00000009146	RBM41	93	83.411	Chlorocebus_sabaeus
ENSRNOG00000057622	Rbm41	94	59.288	ENSCPBG00000001728	RBM41	98	58.578	Chrysemys_picta_bellii
ENSRNOG00000057622	Rbm41	99	87.500	ENSCANG00000028836	RBM41	100	87.500	Colobus_angolensis_palliatus
ENSRNOG00000057622	Rbm41	100	91.041	ENSCGRG00001012295	Rbm41	100	91.041	Cricetulus_griseus_chok1gshd
ENSRNOG00000057622	Rbm41	100	85.126	ENSCGRG00000010545	Rbm41	100	85.126	Cricetulus_griseus_crigri
ENSRNOG00000057622	Rbm41	94	40.097	ENSCSEG00000010491	rbm41	97	40.097	Cynoglossus_semilaevis
ENSRNOG00000057622	Rbm41	96	41.274	ENSDARG00000054096	rbm41	99	41.469	Danio_rerio
ENSRNOG00000057622	Rbm41	99	86.618	ENSDNOG00000013865	RBM41	99	86.618	Dasypus_novemcinctus
ENSRNOG00000057622	Rbm41	98	84.444	ENSDORG00000008077	Rbm41	99	84.444	Dipodomys_ordii
ENSRNOG00000057622	Rbm41	68	92.683	ENSETEG00000019681	-	68	92.683	Echinops_telfairi
ENSRNOG00000057622	Rbm41	100	88.378	ENSECAG00000021846	RBM41	100	88.378	Equus_caballus
ENSRNOG00000057622	Rbm41	99	83.659	ENSEEUG00000006722	RBM41	100	83.659	Erinaceus_europaeus
ENSRNOG00000057622	Rbm41	74	48.113	ENSELUG00000007426	rbm41	92	39.120	Esox_lucius
ENSRNOG00000057622	Rbm41	99	86.618	ENSFCAG00000001982	RBM41	85	86.618	Felis_catus
ENSRNOG00000057622	Rbm41	94	57.069	ENSFALG00000011221	RBM41	91	56.923	Ficedula_albicollis
ENSRNOG00000057622	Rbm41	100	86.683	ENSFDAG00000020264	RBM41	100	86.683	Fukomys_damarensis
ENSRNOG00000057622	Rbm41	84	39.607	ENSFHEG00000006026	rbm41	91	39.607	Fundulus_heteroclitus
ENSRNOG00000057622	Rbm41	95	38.250	ENSGMOG00000005876	rbm41	99	38.250	Gadus_morhua
ENSRNOG00000057622	Rbm41	94	54.872	ENSGALG00000004832	RBM41	98	53.827	Gallus_gallus
ENSRNOG00000057622	Rbm41	95	38.588	ENSGAFG00000011066	rbm41	92	38.333	Gambusia_affinis
ENSRNOG00000057622	Rbm41	94	39.744	ENSGACG00000020842	rbm41	95	39.744	Gasterosteus_aculeatus
ENSRNOG00000057622	Rbm41	94	57.576	ENSGAGG00000015064	RBM41	96	57.072	Gopherus_agassizii
ENSRNOG00000057622	Rbm41	100	88.378	ENSGGOG00000006587	RBM41	100	88.378	Gorilla_gorilla
ENSRNOG00000057622	Rbm41	93	39.675	ENSHBUG00000014307	rbm41	97	39.583	Haplochromis_burtoni
ENSRNOG00000057622	Rbm41	98	87.593	ENSHGLG00000003803	RBM41	94	82.751	Heterocephalus_glaber_female
ENSRNOG00000057622	Rbm41	98	87.654	ENSHGLG00100007396	RBM41	98	87.345	Heterocephalus_glaber_male
ENSRNOG00000057622	Rbm41	94	34.336	ENSHCOG00000009614	rbm41	96	34.336	Hippocampus_comes
ENSRNOG00000057622	Rbm41	98	38.979	ENSIPUG00000007379	rbm41	91	38.799	Ictalurus_punctatus
ENSRNOG00000057622	Rbm41	96	90.176	ENSSTOG00000001604	RBM41	100	88.378	Ictidomys_tridecemlineatus
ENSRNOG00000057622	Rbm41	99	87.255	ENSJJAG00000010415	Rbm41	99	87.255	Jaculus_jaculus
ENSRNOG00000057622	Rbm41	93	39.808	ENSKMAG00000013436	rbm41	99	38.761	Kryptolebias_marmoratus
ENSRNOG00000057622	Rbm41	94	47.754	ENSLACG00000012336	RBM41	100	48.227	Latimeria_chalumnae
ENSRNOG00000057622	Rbm41	50	56.977	ENSLOCG00000014958	rbm41	65	56.977	Lepisosteus_oculatus
ENSRNOG00000057622	Rbm41	99	81.149	ENSLAFG00000028266	RBM41	99	81.149	Loxodonta_africana
ENSRNOG00000057622	Rbm41	99	87.745	ENSMFAG00000041338	RBM41	100	87.745	Macaca_fascicularis
ENSRNOG00000057622	Rbm41	98	87.345	ENSMMUG00000023172	RBM41	98	87.345	Macaca_mulatta
ENSRNOG00000057622	Rbm41	100	87.167	ENSMNEG00000009942	RBM41	100	87.167	Macaca_nemestrina
ENSRNOG00000057622	Rbm41	99	87.255	ENSMLEG00000030890	RBM41	100	87.255	Mandrillus_leucophaeus
ENSRNOG00000057622	Rbm41	95	39.863	ENSMAMG00000000581	rbm41	97	39.863	Mastacembelus_armatus
ENSRNOG00000057622	Rbm41	90	39.952	ENSMZEG00005011676	rbm41	94	39.623	Maylandia_zebra
ENSRNOG00000057622	Rbm41	68	54.577	ENSMGAG00000009663	RBM41	100	51.948	Meleagris_gallopavo
ENSRNOG00000057622	Rbm41	100	91.768	ENSMAUG00000016409	Rbm41	100	91.768	Mesocricetus_auratus
ENSRNOG00000057622	Rbm41	100	85.714	ENSMICG00000009750	RBM41	100	85.714	Microcebus_murinus
ENSRNOG00000057622	Rbm41	100	93.220	ENSMOCG00000008323	Rbm41	100	93.220	Microtus_ochrogaster
ENSRNOG00000057622	Rbm41	92	42.857	ENSMMOG00000014574	rbm41	96	42.857	Mola_mola
ENSRNOG00000057622	Rbm41	100	62.169	ENSMODG00000002312	RBM41	100	62.169	Monodelphis_domestica
ENSRNOG00000057622	Rbm41	93	40.094	ENSMALG00000010729	rbm41	97	39.767	Monopterus_albus
ENSRNOG00000057622	Rbm41	99	96.639	MGP_CAROLIEiJ_G0033447	Rbm41	99	96.639	Mus_caroli
ENSRNOG00000057622	Rbm41	100	93.947	ENSMUSG00000031433	Rbm41	100	93.947	Mus_musculus
ENSRNOG00000057622	Rbm41	100	95.400	MGP_PahariEiJ_G0031986	Rbm41	100	95.400	Mus_pahari
ENSRNOG00000057622	Rbm41	100	94.431	MGP_SPRETEiJ_G0034617	Rbm41	100	94.431	Mus_spretus
ENSRNOG00000057622	Rbm41	99	88.078	ENSMPUG00000003751	RBM41	85	88.078	Mustela_putorius_furo
ENSRNOG00000057622	Rbm41	99	87.105	ENSMLUG00000005943	RBM41	99	87.105	Myotis_lucifugus
ENSRNOG00000057622	Rbm41	100	83.066	ENSNGAG00000014004	Rbm41	100	83.066	Nannospalax_galili
ENSRNOG00000057622	Rbm41	90	42.145	ENSNBRG00000014480	rbm41	94	41.769	Neolamprologus_brichardi
ENSRNOG00000057622	Rbm41	100	88.136	ENSNLEG00000013861	RBM41	100	88.136	Nomascus_leucogenys
ENSRNOG00000057622	Rbm41	99	62.621	ENSMEUG00000002663	RBM41	100	62.621	Notamacropus_eugenii
ENSRNOG00000057622	Rbm41	100	85.230	ENSODEG00000010074	RBM41	100	85.230	Octodon_degus
ENSRNOG00000057622	Rbm41	94	42.822	ENSONIG00000013260	rbm41	100	42.822	Oreochromis_niloticus
ENSRNOG00000057622	Rbm41	99	84.428	ENSOCUG00000015937	RBM41	97	84.428	Oryctolagus_cuniculus
ENSRNOG00000057622	Rbm41	76	51.546	ENSORLG00000015367	rbm41	75	51.546	Oryzias_latipes
ENSRNOG00000057622	Rbm41	76	51.031	ENSORLG00020008056	rbm41	69	51.031	Oryzias_latipes_hni
ENSRNOG00000057622	Rbm41	95	39.952	ENSORLG00015014350	rbm41	99	39.952	Oryzias_latipes_hsok
ENSRNOG00000057622	Rbm41	93	39.320	ENSOMEG00000023816	rbm41	98	38.995	Oryzias_melastigma
ENSRNOG00000057622	Rbm41	99	86.375	ENSOGAG00000009280	RBM41	99	86.375	Otolemur_garnettii
ENSRNOG00000057622	Rbm41	99	87.105	ENSOARG00000018817	RBM41	94	87.105	Ovis_aries
ENSRNOG00000057622	Rbm41	100	88.378	ENSPPAG00000000213	RBM41	100	88.378	Pan_paniscus
ENSRNOG00000057622	Rbm41	100	87.409	ENSPPRG00000021500	RBM41	100	87.409	Panthera_pardus
ENSRNOG00000057622	Rbm41	98	89.356	ENSPTRG00000022158	RBM41	99	89.356	Pan_troglodytes
ENSRNOG00000057622	Rbm41	100	87.651	ENSPANG00000012935	RBM41	100	87.651	Papio_anubis
ENSRNOG00000057622	Rbm41	94	40.878	ENSPKIG00000008793	rbm41	99	40.878	Paramormyrops_kingsleyae
ENSRNOG00000057622	Rbm41	62	53.257	ENSPSIG00000003931	RBM41	98	53.257	Pelodiscus_sinensis
ENSRNOG00000057622	Rbm41	99	91.505	ENSPEMG00000015991	Rbm41	99	91.505	Peromyscus_maniculatus_bairdii
ENSRNOG00000057622	Rbm41	96	64.646	ENSPCIG00000007079	RBM41	100	64.646	Phascolarctos_cinereus
ENSRNOG00000057622	Rbm41	93	38.889	ENSPMEG00000002394	rbm41	94	38.663	Poecilia_mexicana
ENSRNOG00000057622	Rbm41	93	38.741	ENSPREG00000013759	rbm41	93	38.517	Poecilia_reticulata
ENSRNOG00000057622	Rbm41	100	88.620	ENSPPYG00000020609	RBM41	100	88.620	Pongo_abelii
ENSRNOG00000057622	Rbm41	100	85.714	ENSPCAG00000003991	RBM41	100	85.714	Procavia_capensis
ENSRNOG00000057622	Rbm41	100	87.409	ENSPCOG00000014296	RBM41	100	87.409	Propithecus_coquereli
ENSRNOG00000057622	Rbm41	68	89.796	ENSPVAG00000001786	-	68	89.796	Pteropus_vampyrus
ENSRNOG00000057622	Rbm41	90	41.689	ENSPNYG00000012687	rbm41	94	41.299	Pundamilia_nyererei
ENSRNOG00000057622	Rbm41	95	40.230	ENSPNAG00000003395	rbm41	96	40.230	Pygocentrus_nattereri
ENSRNOG00000057622	Rbm41	99	87.379	ENSRBIG00000030599	RBM41	99	88.366	Rhinopithecus_bieti
ENSRNOG00000057622	Rbm41	99	87.379	ENSRROG00000009201	RBM41	99	88.366	Rhinopithecus_roxellana
ENSRNOG00000057622	Rbm41	100	87.409	ENSSBOG00000030042	RBM41	100	87.409	Saimiri_boliviensis_boliviensis
ENSRNOG00000057622	Rbm41	99	64.165	ENSSHAG00000002285	RBM41	100	64.165	Sarcophilus_harrisii
ENSRNOG00000057622	Rbm41	94	40.367	ENSSFOG00015009956	rbm41	95	40.596	Scleropages_formosus
ENSRNOG00000057622	Rbm41	93	41.687	ENSSMAG00000014485	rbm41	99	40.952	Scophthalmus_maximus
ENSRNOG00000057622	Rbm41	94	40.093	ENSSDUG00000008808	rbm41	97	40.093	Seriola_dumerili
ENSRNOG00000057622	Rbm41	93	40.330	ENSSLDG00000002232	rbm41	97	40.000	Seriola_lalandi_dorsalis
ENSRNOG00000057622	Rbm41	100	84.262	ENSSARG00000004377	RBM41	100	84.262	Sorex_araneus
ENSRNOG00000057622	Rbm41	93	53.866	ENSSPUG00000018486	RBM41	96	53.866	Sphenodon_punctatus
ENSRNOG00000057622	Rbm41	93	39.765	ENSSPAG00000018885	rbm41	97	40.047	Stegastes_partitus
ENSRNOG00000057622	Rbm41	100	88.136	ENSSSCG00000012556	RBM41	100	88.136	Sus_scrofa
ENSRNOG00000057622	Rbm41	68	55.477	ENSTGUG00000006473	-	98	54.027	Taeniopygia_guttata
ENSRNOG00000057622	Rbm41	95	39.480	ENSTRUG00000009805	rbm41	99	39.480	Takifugu_rubripes
ENSRNOG00000057622	Rbm41	96	40.247	ENSTNIG00000004692	rbm41	96	40.247	Tetraodon_nigroviridis
ENSRNOG00000057622	Rbm41	99	88.452	ENSUAMG00000021897	RBM41	98	88.452	Ursus_americanus
ENSRNOG00000057622	Rbm41	100	87.409	ENSVPAG00000003647	RBM41	100	87.409	Vicugna_pacos
ENSRNOG00000057622	Rbm41	99	88.078	ENSVVUG00000009707	RBM41	85	88.078	Vulpes_vulpes
ENSRNOG00000057622	Rbm41	93	38.221	ENSXCOG00000018744	rbm41	94	38.038	Xiphophorus_couchianus
ENSRNOG00000057622	Rbm41	93	38.795	ENSXMAG00000015338	rbm41	94	38.571	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0005689	U12-type spliceosomal complex	21873635.	IBA	Component
GO:0030626	U12 snRNA binding	21873635.	IBA	Function
GO:0097157	pre-mRNA intronic binding	21873635.	IBA	Function