EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000057943 (Gene tree)
Gene ID: -
Gene Symbol: AABR07058884.2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 13701 bases
Position: chr7:141642777-141656477
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074535	La	PF05383.17	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079811	AABR07058884.2-201	639	-	ENSRNOP00000074535	213 (aa)	-	A0A0G2K8A9

Gene Model

Click here to download ENSRNOG00000057943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000057943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000057943	AABR07058884.2	98	80.095	ENSG00000161813	LARP4	100	83.784	Homo_sapiens
ENSRNOG00000057943	AABR07058884.2	95	50.000	ENSACIG00000001198	larp4aa	56	73.000	Amphilophus_citrinellus
ENSRNOG00000057943	AABR07058884.2	97	51.163	ENSAPEG00000015441	larp4ab	62	57.778	Amphiprion_percula
ENSRNOG00000057943	AABR07058884.2	96	46.698	ENSACLG00000000777	larp4ab	52	46.698	Astatotilapia_calliptera
ENSRNOG00000057943	AABR07058884.2	67	65.734	ENSCCAG00000030343	-	80	65.734	Cebus_capucinus
ENSRNOG00000057943	AABR07058884.2	67	74.825	ENSCATG00000039611	-	81	74.825	Cercocebus_atys
ENSRNOG00000057943	AABR07058884.2	98	76.303	ENSCANG00000033097	-	55	75.524	Colobus_angolensis_palliatus
ENSRNOG00000057943	AABR07058884.2	67	71.831	ENSCGRG00001011032	-	63	71.831	Cricetulus_griseus_chok1gshd
ENSRNOG00000057943	AABR07058884.2	67	75.524	ENSCGRG00001011674	-	67	75.524	Cricetulus_griseus_chok1gshd
ENSRNOG00000057943	AABR07058884.2	67	72.028	ENSCGRG00001000311	-	75	72.028	Cricetulus_griseus_chok1gshd
ENSRNOG00000057943	AABR07058884.2	67	75.524	ENSCGRG00000000087	-	77	75.524	Cricetulus_griseus_crigri
ENSRNOG00000057943	AABR07058884.2	54	66.102	ENSCVAG00000001411	-	65	66.102	Cyprinodon_variegatus
ENSRNOG00000057943	AABR07058884.2	98	53.456	ENSDARG00000074979	larp4ab	56	73.000	Danio_rerio
ENSRNOG00000057943	AABR07058884.2	74	70.886	ENSFDAG00000003796	-	74	75.556	Fukomys_damarensis
ENSRNOG00000057943	AABR07058884.2	96	53.110	ENSGACG00000008381	larp4aa	55	53.110	Gasterosteus_aculeatus
ENSRNOG00000057943	AABR07058884.2	99	73.148	ENSHGLG00100000622	-	83	73.148	Heterocephalus_glaber_male
ENSRNOG00000057943	AABR07058884.2	94	82.266	ENSJJAG00000014649	-	94	82.266	Jaculus_jaculus
ENSRNOG00000057943	AABR07058884.2	67	76.923	ENSMFAG00000001037	-	81	76.923	Macaca_fascicularis
ENSRNOG00000057943	AABR07058884.2	67	76.923	ENSMMUG00000045683	-	81	76.923	Macaca_mulatta
ENSRNOG00000057943	AABR07058884.2	98	63.158	ENSMNEG00000037799	-	85	75.524	Macaca_nemestrina
ENSRNOG00000057943	AABR07058884.2	67	69.930	ENSMLEG00000038232	-	80	69.930	Mandrillus_leucophaeus
ENSRNOG00000057943	AABR07058884.2	96	46.698	ENSMZEG00005007771	larp4ab	52	46.698	Maylandia_zebra
ENSRNOG00000057943	AABR07058884.2	96	74.519	ENSMICG00000030156	-	68	78.808	Microcebus_murinus
ENSRNOG00000057943	AABR07058884.2	67	79.720	ENSMICG00000046883	-	79	79.720	Microcebus_murinus
ENSRNOG00000057943	AABR07058884.2	98	67.453	ENSMODG00000004844	-	99	67.453	Monodelphis_domestica
ENSRNOG00000057943	AABR07058884.2	52	68.182	ENSMALG00000018631	larp4aa	67	60.150	Monopterus_albus
ENSRNOG00000057943	AABR07058884.2	98	84.689	MGP_CAROLIEiJ_G0020281	Larp4	55	84.689	Mus_caroli
ENSRNOG00000057943	AABR07058884.2	96	46.377	ENSNBRG00000015675	larp4ab	54	68.000	Neolamprologus_brichardi
ENSRNOG00000057943	AABR07058884.2	98	52.632	ENSOMEG00000019749	larp4aa	53	72.000	Oryzias_melastigma
ENSRNOG00000057943	AABR07058884.2	98	74.528	ENSPPAG00000039122	-	54	74.528	Pan_paniscus
ENSRNOG00000057943	AABR07058884.2	98	75.000	ENSPTRG00000045907	-	60	75.000	Pan_troglodytes
ENSRNOG00000057943	AABR07058884.2	98	46.411	ENSPMGG00000002719	larp4ab	50	46.411	Periophthalmus_magnuspinnatus
ENSRNOG00000057943	AABR07058884.2	96	52.336	ENSPREG00000016263	larp4ab	82	48.826	Poecilia_reticulata
ENSRNOG00000057943	AABR07058884.2	99	75.701	ENSPPYG00000006330	-	98	75.701	Pongo_abelii
ENSRNOG00000057943	AABR07058884.2	67	63.636	ENSSBOG00000035851	-	76	63.636	Saimiri_boliviensis_boliviensis
ENSRNOG00000057943	AABR07058884.2	97	49.038	ENSSPAG00000007222	larp4aa	52	73.000	Stegastes_partitus
ENSRNOG00000057943	AABR07058884.2	91	50.754	ENSTRUG00000015939	larp4aa	53	50.754	Takifugu_rubripes
ENSRNOG00000057943	AABR07058884.2	98	50.230	ENSXCOG00000019635	larp4ab	81	49.296	Xiphophorus_couchianus