EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000058209 (Gene tree)
Gene ID: -
Gene Symbol: AABR07063893.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5284 bases
Position: chr6:54438436-54443719
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073611	RVT_1	PF00078.27	2.4e-54	1	1
ENSRNOP00000073611	Transposase_22	PF02994.14	1.1e-46	1	1
ENSRNOP00000073611	Exo_endo_phos	PF03372.23	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091972	AABR07063893.1-201	4893	-	ENSRNOP00000073611	1631 (aa)	-	A0A0G2K5Z0

Gene Model

Click here to download ENSRNOG00000058209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000058209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000058209	AABR07063893.1	55	96.423	ENSRNOG00000005861	Hsd11b1	80	96.423
ENSRNOG00000058209	AABR07063893.1	100	97.491	ENSRNOG00000056033	AC111632.2	98	97.491
ENSRNOG00000058209	AABR07063893.1	100	98.284	ENSRNOG00000054519	AABR07053179.1	95	98.284
ENSRNOG00000058209	AABR07063893.1	59	93.514	ENSRNOG00000034030	AC130162.1	72	93.514
ENSRNOG00000058209	AABR07063893.1	58	93.298	ENSRNOG00000058277	AC080157.1	70	98.295
ENSRNOG00000058209	AABR07063893.1	99	98.134	ENSRNOG00000056748	AC229945.1	100	98.134
ENSRNOG00000058209	AABR07063893.1	100	98.040	ENSRNOG00000059691	AABR07033318.1	95	98.040
ENSRNOG00000058209	AABR07063893.1	99	97.975	ENSRNOG00000060742	AABR07029809.1	100	97.975
ENSRNOG00000058209	AABR07063893.1	100	97.733	ENSRNOG00000049504	AABR07009221.1	96	97.733
ENSRNOG00000058209	AABR07063893.1	59	93.029	ENSRNOG00000045583	AABR07002068.1	71	98.011
ENSRNOG00000058209	AABR07063893.1	61	98.337	ENSRNOG00000057039	AC124874.1	92	98.337
ENSRNOG00000058209	AABR07063893.1	100	97.431	ENSRNOG00000059133	AABR07020537.1	98	97.431
ENSRNOG00000058209	AABR07063893.1	99	98.204	ENSRNOG00000047294	AABR07043115.1	100	98.204
ENSRNOG00000058209	AABR07063893.1	58	93.734	ENSRNOG00000060618	AABR07027267.1	69	98.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000058209	AABR07063893.1	57	65.767	ENSBTAG00000055052	-	99	65.767	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	72	63.612	ENSBTAG00000053316	-	92	63.612	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	52	65.998	ENSBTAG00000051119	-	97	65.998	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	52	65.570	ENSBTAG00000054826	-	98	65.570	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	62	64.208	ENSBTAG00000054392	-	97	64.208	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	53	65.774	ENSBTAG00000051999	-	99	66.082	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	72	63.522	ENSBTAG00000050847	-	92	63.522	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	63	64.486	ENSBTAG00000050534	-	91	64.486	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	70	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	72	63.432	ENSBTAG00000051842	-	92	63.432	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	50	66.543	ENSBTAG00000052047	-	100	66.543	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	72	63.931	ENSBTAG00000049649	-	92	63.931	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	52	64.865	ENSBTAG00000050251	-	99	64.865	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	54	66.065	ENSBTAG00000049728	-	99	66.065	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	68	63.702	ENSBTAG00000051208	-	92	63.702	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	72	63.522	ENSBTAG00000050912	-	92	63.522	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	66	64.208	ENSBTAG00000049055	-	92	64.208	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	72	63.432	ENSBTAG00000050965	-	92	63.432	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	52	67.474	ENSBTAG00000052305	-	89	67.474	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	68	63.432	ENSBTAG00000053324	-	93	63.432	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	54	65.646	ENSBTAG00000051121	-	99	65.646	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	63	64.071	ENSBTAG00000054175	-	91	64.071	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	64	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000058209	AABR07063893.1	55	66.746	ENSCHIG00000008419	-	90	66.746	Capra_hircus
ENSRNOG00000058209	AABR07063893.1	53	66.958	ENSCHIG00000008599	-	90	66.958	Capra_hircus
ENSRNOG00000058209	AABR07063893.1	72	75.404	ENSCGRG00000018654	-	92	75.404	Cricetulus_griseus_crigri
ENSRNOG00000058209	AABR07063893.1	72	75.404	ENSCGRG00000019476	-	92	75.404	Cricetulus_griseus_crigri
ENSRNOG00000058209	AABR07063893.1	68	75.404	ENSCGRG00000018650	-	89	75.404	Cricetulus_griseus_crigri
ENSRNOG00000058209	AABR07063893.1	67	75.725	ENSCGRG00000019462	-	92	75.725	Cricetulus_griseus_crigri
ENSRNOG00000058209	AABR07063893.1	72	75.404	ENSCGRG00000019173	-	92	75.404	Cricetulus_griseus_crigri
ENSRNOG00000058209	AABR07063893.1	64	63.073	ENSOCUG00000029631	-	99	63.073	Oryctolagus_cuniculus
ENSRNOG00000058209	AABR07063893.1	64	64.742	ENSOCUG00000029721	-	91	64.742	Oryctolagus_cuniculus
ENSRNOG00000058209	AABR07063893.1	72	63.702	ENSOARG00000001175	-	92	63.702	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	51	67.755	ENSOARG00000006683	-	88	67.755	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	66	64.208	ENSOARG00000005813	-	92	64.208	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	72	63.702	ENSOARG00000000057	-	92	63.702	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	66	64.158	ENSOARG00000008210	-	89	64.158	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	72	63.792	ENSOARG00000010889	-	92	63.792	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	57	63.470	ENSOARG00000011096	-	84	63.470	Ovis_aries
ENSRNOG00000058209	AABR07063893.1	53	66.873	ENSSSCG00000040911	-	88	66.873	Sus_scrofa
ENSRNOG00000058209	AABR07063893.1	72	63.906	ENSSSCG00000039414	-	92	63.906	Sus_scrofa
ENSRNOG00000058209	AABR07063893.1	51	65.496	ENSSSCG00000037083	-	99	65.496	Sus_scrofa
ENSRNOG00000058209	AABR07063893.1	72	65.574	ENSSSCG00000040939	-	92	65.574	Sus_scrofa
ENSRNOG00000058209	AABR07063893.1	54	64.892	ENSSSCG00000035697	-	91	64.892	Sus_scrofa
ENSRNOG00000058209	AABR07063893.1	68	63.726	ENSSSCG00000036442	-	95	63.726	Sus_scrofa