EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000058277 (Gene tree)
Gene ID: -
Gene Symbol: AC080157.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 44954 bases
Position: chr1:254530121-254575074
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071335	RVT_1	PF00078.27	7.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091377	AC080157.1-202	1992	-	ENSRNOP00000070369	663 (aa)	-	A0A0G2JXQ9
ENSRNOT00000089627	AC080157.1-201	3924	-	ENSRNOP00000071335	1308 (aa)	-	A0A0G2K076

Gene Model

Click here to download ENSRNOG00000058277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000058277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000058277	AC080157.1	73	98.864	ENSRNOG00000059133	AABR07020537.1	60	93.834
ENSRNOG00000058277	AC080157.1	69	98.295	ENSRNOG00000047294	AABR07043115.1	58	93.298
ENSRNOG00000058277	AC080157.1	75	98.580	ENSRNOG00000054519	AABR07053179.1	59	93.566
ENSRNOG00000058277	AC080157.1	75	98.864	ENSRNOG00000049504	AABR07009221.1	60	93.834
ENSRNOG00000058277	AC080157.1	99	75.512	ENSRNOG00000034030	AC130162.1	99	75.133
ENSRNOG00000058277	AC080157.1	69	98.295	ENSRNOG00000056748	AC229945.1	58	93.298
ENSRNOG00000058277	AC080157.1	52	96.109	ENSRNOG00000005861	Hsd11b1	61	96.109
ENSRNOG00000058277	AC080157.1	100	75.019	ENSRNOG00000045583	AABR07002068.1	100	74.792
ENSRNOG00000058277	AC080157.1	73	98.864	ENSRNOG00000056033	AC111632.2	60	93.834
ENSRNOG00000058277	AC080157.1	70	98.295	ENSRNOG00000058209	AABR07063893.1	58	93.298
ENSRNOG00000058277	AC080157.1	99	75.371	ENSRNOG00000060618	AABR07027267.1	99	75.371
ENSRNOG00000058277	AC080157.1	75	98.295	ENSRNOG00000059691	AABR07033318.1	59	93.298
ENSRNOG00000058277	AC080157.1	70	98.295	ENSRNOG00000060742	AABR07029809.1	58	93.298
ENSRNOG00000058277	AC080157.1	56	98.580	ENSRNOG00000057039	AC124874.1	69	98.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000058277	AC080157.1	53	73.295	ENSBTAG00000053585	-	95	73.199	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.716	ENSBTAG00000053316	-	65	74.640	Bos_taurus
ENSRNOG00000058277	AC080157.1	53	74.432	ENSBTAG00000054392	-	72	74.352	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	75.000	ENSBTAG00000050534	-	73	74.928	Bos_taurus
ENSRNOG00000058277	AC080157.1	56	77.143	ENSBTAG00000050735	-	72	77.143	Bos_taurus
ENSRNOG00000058277	AC080157.1	53	75.000	ENSBTAG00000053324	-	65	74.928	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	75.000	ENSBTAG00000049649	-	65	74.928	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	75.000	ENSBTAG00000050965	-	66	74.928	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.716	ENSBTAG00000050912	-	60	74.640	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.716	ENSBTAG00000052305	-	87	74.640	Bos_taurus
ENSRNOG00000058277	AC080157.1	53	75.000	ENSBTAG00000051208	-	63	74.928	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.432	ENSBTAG00000054175	-	75	74.352	Bos_taurus
ENSRNOG00000058277	AC080157.1	56	78.947	ENSBTAG00000053171	-	64	78.947	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.716	ENSBTAG00000051842	-	67	74.640	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	75.000	ENSBTAG00000050847	-	66	74.928	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.716	ENSBTAG00000049055	-	72	74.640	Bos_taurus
ENSRNOG00000058277	AC080157.1	58	74.432	ENSCHIG00000008599	-	84	74.352	Capra_hircus
ENSRNOG00000058277	AC080157.1	58	74.432	ENSCHIG00000008419	-	82	74.352	Capra_hircus
ENSRNOG00000058277	AC080157.1	51	77.011	ENSCHIG00000010102	-	86	77.011	Capra_hircus
ENSRNOG00000058277	AC080157.1	57	81.534	ENSCGRG00000018650	-	61	76.862	Cricetulus_griseus_crigri
ENSRNOG00000058277	AC080157.1	58	81.534	ENSCGRG00000018654	-	61	76.862	Cricetulus_griseus_crigri
ENSRNOG00000058277	AC080157.1	58	81.534	ENSCGRG00000019173	-	61	76.862	Cricetulus_griseus_crigri
ENSRNOG00000058277	AC080157.1	58	81.534	ENSCGRG00000019462	-	66	76.862	Cricetulus_griseus_crigri
ENSRNOG00000058277	AC080157.1	58	81.534	ENSCGRG00000019476	-	62	76.862	Cricetulus_griseus_crigri
ENSRNOG00000058277	AC080157.1	59	70.195	ENSOCUG00000029721	-	71	69.589	Oryctolagus_cuniculus
ENSRNOG00000058277	AC080157.1	58	74.432	ENSOARG00000008210	-	69	74.352	Ovis_aries
ENSRNOG00000058277	AC080157.1	58	74.432	ENSOARG00000005813	-	70	74.352	Ovis_aries
ENSRNOG00000058277	AC080157.1	57	74.627	ENSOARG00000006683	-	86	74.627	Ovis_aries
ENSRNOG00000058277	AC080157.1	58	74.432	ENSOARG00000010889	-	65	74.352	Ovis_aries
ENSRNOG00000058277	AC080157.1	58	74.432	ENSOARG00000000057	-	65	74.352	Ovis_aries
ENSRNOG00000058277	AC080157.1	58	74.716	ENSOARG00000001175	-	65	74.640	Ovis_aries
ENSRNOG00000058277	AC080157.1	53	73.143	ENSSSCG00000035697	-	78	72.911	Sus_scrofa
ENSRNOG00000058277	AC080157.1	51	75.000	ENSSSCG00000040141	-	80	75.000	Sus_scrofa
ENSRNOG00000058277	AC080157.1	54	73.143	ENSSSCG00000036442	-	66	72.911	Sus_scrofa
ENSRNOG00000058277	AC080157.1	58	73.714	ENSSSCG00000039414	-	65	73.487	Sus_scrofa
ENSRNOG00000058277	AC080157.1	58	73.143	ENSSSCG00000040939	-	65	72.911	Sus_scrofa
ENSRNOG00000058277	AC080157.1	51	75.781	ENSSSCG00000037444	-	87	75.781	Sus_scrofa
ENSRNOG00000058277	AC080157.1	51	76.172	ENSSSCG00000033555	-	87	76.172	Sus_scrofa
ENSRNOG00000058277	AC080157.1	51	75.391	ENSSSCG00000035060	-	87	75.391	Sus_scrofa
ENSRNOG00000058277	AC080157.1	58	73.714	ENSSSCG00000040911	-	83	73.487	Sus_scrofa