EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000058388 (Gene tree)
Gene ID: 79426
Gene Symbol: Zfp36
Alias: TTP|Tis11|zfp-36
Full Name: zinc finger protein 36
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 2482 bases
Position: chr1:85380088-85382569
Accession: 620722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073413	zf-CCCH	PF00642.24	1e-19	1	2
ENSRNOP00000073413	zf-CCCH	PF00642.24	1e-19	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090129	-	1812	-	ENSRNOP00000073413	326 (aa)	-	G3V8K6

Gene Model

Click here to download ENSRNOG00000058388's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05166	Human T-cell leukemia virus 1 infection	KEGG
rno05167	Kaposi sarcoma-associated herpesvirus infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000058388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000058388	Zfp36	100	84.084	ENSG00000128016	ZFP36	100	84.084	Homo_sapiens
ENSRNOG00000058388	Zfp36	98	84.049	ENSAMEG00000008499	ZFP36	100	85.276	Ailuropoda_melanoleuca
ENSRNOG00000058388	Zfp36	100	82.934	ENSANAG00000034306	ZFP36	100	81.138	Aotus_nancymaae
ENSRNOG00000058388	Zfp36	98	80.428	ENSBTAG00000008573	ZFP36	100	82.515	Bos_taurus
ENSRNOG00000058388	Zfp36	100	82.934	ENSCJAG00000014156	ZFP36	100	81.138	Callithrix_jacchus
ENSRNOG00000058388	Zfp36	98	78.834	ENSCAFG00000005530	ZFP36	100	77.607	Canis_familiaris
ENSRNOG00000058388	Zfp36	99	80.243	ENSCAFG00020015861	ZFP36	99	79.027	Canis_lupus_dingo
ENSRNOG00000058388	Zfp36	98	80.428	ENSCHIG00000023209	ZFP36	100	82.209	Capra_hircus
ENSRNOG00000058388	Zfp36	98	83.801	ENSCPOG00000038352	ZFP36	100	81.308	Cavia_porcellus
ENSRNOG00000058388	Zfp36	100	82.635	ENSCCAG00000034094	ZFP36	100	80.838	Cebus_capucinus
ENSRNOG00000058388	Zfp36	100	84.384	ENSCATG00000039148	ZFP36	100	84.384	Cercocebus_atys
ENSRNOG00000058388	Zfp36	98	80.745	ENSCLAG00000014820	ZFP36	100	81.056	Chinchilla_lanigera
ENSRNOG00000058388	Zfp36	100	84.384	ENSCSAG00000003862	ZFP36	100	84.384	Chlorocebus_sabaeus
ENSRNOG00000058388	Zfp36	99	42.817	ENSCPBG00000018753	ZFP36	55	49.261	Chrysemys_picta_bellii
ENSRNOG00000058388	Zfp36	100	84.084	ENSCANG00000010605	ZFP36	100	84.084	Colobus_angolensis_palliatus
ENSRNOG00000058388	Zfp36	98	91.049	ENSCGRG00001007290	Zfp36	100	88.889	Cricetulus_griseus_chok1gshd
ENSRNOG00000058388	Zfp36	94	91.909	ENSCGRG00000019003	Zfp36	99	89.644	Cricetulus_griseus_crigri
ENSRNOG00000058388	Zfp36	81	74.632	ENSDNOG00000033326	ZFP36	92	76.384	Dasypus_novemcinctus
ENSRNOG00000058388	Zfp36	98	84.211	ENSDORG00000013487	Zfp36	100	83.591	Dipodomys_ordii
ENSRNOG00000058388	Zfp36	98	84.049	ENSEASG00005012802	ZFP36	100	85.276	Equus_asinus_asinus
ENSRNOG00000058388	Zfp36	98	82.209	ENSECAG00000033926	ZFP36	100	83.436	Equus_caballus
ENSRNOG00000058388	Zfp36	100	82.883	ENSFCAG00000045634	ZFP36	100	82.229	Felis_catus
ENSRNOG00000058388	Zfp36	98	83.230	ENSFDAG00000008740	ZFP36	100	81.056	Fukomys_damarensis
ENSRNOG00000058388	Zfp36	70	51.822	ENSGAGG00000021476	ZFP36	56	48.325	Gopherus_agassizii
ENSRNOG00000058388	Zfp36	100	83.784	ENSGGOG00000014399	ZFP36	100	83.784	Gorilla_gorilla
ENSRNOG00000058388	Zfp36	98	84.161	ENSHGLG00000007955	ZFP36	100	82.609	Heterocephalus_glaber_female
ENSRNOG00000058388	Zfp36	98	79.193	ENSHGLG00100017184	ZFP36	100	76.708	Heterocephalus_glaber_male
ENSRNOG00000058388	Zfp36	100	90.184	ENSSTOG00000019840	ZFP36	100	90.184	Ictidomys_tridecemlineatus
ENSRNOG00000058388	Zfp36	98	81.173	ENSJJAG00000011735	-	100	85.185	Jaculus_jaculus
ENSRNOG00000058388	Zfp36	98	83.642	ENSJJAG00000010452	-	100	87.654	Jaculus_jaculus
ENSRNOG00000058388	Zfp36	100	84.384	ENSMFAG00000000900	ZFP36	100	84.384	Macaca_fascicularis
ENSRNOG00000058388	Zfp36	100	84.384	ENSMMUG00000038702	ZFP36	100	84.384	Macaca_mulatta
ENSRNOG00000058388	Zfp36	100	84.384	ENSMNEG00000039734	ZFP36	100	84.384	Macaca_nemestrina
ENSRNOG00000058388	Zfp36	100	84.685	ENSMLEG00000041066	ZFP36	100	84.685	Mandrillus_leucophaeus
ENSRNOG00000058388	Zfp36	98	87.500	ENSMAUG00000021250	Zfp36	100	86.875	Mesocricetus_auratus
ENSRNOG00000058388	Zfp36	100	81.138	ENSMICG00000026814	ZFP36	100	81.737	Microcebus_murinus
ENSRNOG00000058388	Zfp36	98	93.750	ENSMOCG00000014548	Zfp36	100	93.750	Microtus_ochrogaster
ENSRNOG00000058388	Zfp36	99	54.545	ENSMODG00000013494	ZFP36	96	53.631	Monodelphis_domestica
ENSRNOG00000058388	Zfp36	98	95.938	MGP_CAROLIEiJ_G0029444	Zfp36	100	95.938	Mus_caroli
ENSRNOG00000058388	Zfp36	98	96.562	ENSMUSG00000044786	Zfp36	100	96.753	Mus_musculus
ENSRNOG00000058388	Zfp36	98	95.938	MGP_PahariEiJ_G0012680	Zfp36	100	95.938	Mus_pahari
ENSRNOG00000058388	Zfp36	98	96.875	MGP_SPRETEiJ_G0030542	Zfp36	100	96.875	Mus_spretus
ENSRNOG00000058388	Zfp36	98	81.707	ENSMPUG00000017726	ZFP36	100	82.927	Mustela_putorius_furo
ENSRNOG00000058388	Zfp36	98	80.000	ENSMLUG00000002942	ZFP36	100	79.692	Myotis_lucifugus
ENSRNOG00000058388	Zfp36	100	87.156	ENSNGAG00000019033	Zfp36	100	87.156	Nannospalax_galili
ENSRNOG00000058388	Zfp36	100	81.381	ENSNLEG00000014418	ZFP36	100	81.381	Nomascus_leucogenys
ENSRNOG00000058388	Zfp36	92	58.125	ENSMEUG00000010317	ZFP36	92	57.282	Notamacropus_eugenii
ENSRNOG00000058388	Zfp36	98	84.424	ENSODEG00000016693	ZFP36	100	84.424	Octodon_degus
ENSRNOG00000058388	Zfp36	98	84.375	ENSOCUG00000003400	ZFP36	100	84.375	Oryctolagus_cuniculus
ENSRNOG00000058388	Zfp36	98	86.154	ENSOGAG00000034231	ZFP36	100	86.068	Otolemur_garnettii
ENSRNOG00000058388	Zfp36	98	78.287	ENSOARG00000006068	ZFP36	100	78.834	Ovis_aries
ENSRNOG00000058388	Zfp36	100	83.784	ENSPPAG00000032232	ZFP36	100	83.784	Pan_paniscus
ENSRNOG00000058388	Zfp36	100	83.133	ENSPPRG00000013318	ZFP36	100	81.928	Panthera_pardus
ENSRNOG00000058388	Zfp36	100	83.133	ENSPTIG00000010660	ZFP36	100	81.928	Panthera_tigris_altaica
ENSRNOG00000058388	Zfp36	100	83.784	ENSPTRG00000010968	ZFP36	100	83.784	Pan_troglodytes
ENSRNOG00000058388	Zfp36	100	84.384	ENSPANG00000007276	ZFP36	100	84.384	Papio_anubis
ENSRNOG00000058388	Zfp36	98	94.062	ENSPEMG00000007506	Zfp36	100	94.062	Peromyscus_maniculatus_bairdii
ENSRNOG00000058388	Zfp36	92	56.757	ENSPCIG00000010489	ZFP36	97	55.589	Phascolarctos_cinereus
ENSRNOG00000058388	Zfp36	59	82.323	ENSPPYG00000010577	-	88	82.540	Pongo_abelii
ENSRNOG00000058388	Zfp36	100	82.934	ENSPCOG00000016898	ZFP36	100	83.234	Propithecus_coquereli
ENSRNOG00000058388	Zfp36	98	82.209	ENSPVAG00000011124	ZFP36	100	83.129	Pteropus_vampyrus
ENSRNOG00000058388	Zfp36	100	83.483	ENSRBIG00000038385	ZFP36	100	83.483	Rhinopithecus_bieti
ENSRNOG00000058388	Zfp36	100	83.483	ENSRROG00000042031	ZFP36	100	83.483	Rhinopithecus_roxellana
ENSRNOG00000058388	Zfp36	100	82.635	ENSSBOG00000033740	ZFP36	100	80.838	Saimiri_boliviensis_boliviensis
ENSRNOG00000058388	Zfp36	80	57.093	ENSSHAG00000009151	-	99	54.007	Sarcophilus_harrisii
ENSRNOG00000058388	Zfp36	98	84.404	ENSSSCG00000028056	ZFP36	100	85.627	Sus_scrofa
ENSRNOG00000058388	Zfp36	92	87.541	ENSTBEG00000005948	ZFP36	100	86.751	Tupaia_belangeri
ENSRNOG00000058388	Zfp36	98	80.982	ENSTTRG00000003564	ZFP36	100	81.902	Tursiops_truncatus
ENSRNOG00000058388	Zfp36	98	83.742	ENSUAMG00000009986	ZFP36	100	84.969	Ursus_americanus
ENSRNOG00000058388	Zfp36	94	83.601	ENSUMAG00000019533	ZFP36	100	83.436	Ursus_maritimus
ENSRNOG00000058388	Zfp36	99	79.939	ENSVVUG00000006271	ZFP36	99	78.723	Vulpes_vulpes
ENSRNOG00000058388	Zfp36	71	51.282	ENSXETG00000002899	zfp36	61	44.700	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000165	MAPK cascade	-	ISO	Process
GO:0000165	MAPK cascade	-	ISS	Process
GO:0000178	exosome (RNase complex)	-	ISO	Component
GO:0000178	exosome (RNase complex)	-	ISS	Component
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	ISO	Process
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	-	IEA	Process
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	-	ISO	Process
GO:0000932	P-body	-	ISO	Component
GO:0000932	P-body	-	ISS	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0003729	mRNA binding	-	ISO	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	27193233.	IDA	Function
GO:0005634	nucleus	12054509.	IDA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	12054509.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0006402	mRNA catabolic process	-	ISO	Process
GO:0006402	mRNA catabolic process	-	ISS	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0009611	response to wounding	-	IEA	Process
GO:0009611	response to wounding	-	ISO	Process
GO:0009611	response to wounding	-	ISS	Process
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0010494	cytoplasmic stress granule	-	ISS	Component
GO:0010837	regulation of keratinocyte proliferation	-	ISO	Process
GO:0010837	regulation of keratinocyte proliferation	-	ISS	Process
GO:0017091	AU-rich element binding	-	ISO	Function
GO:0017091	AU-rich element binding	-	ISS	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0019957	C-C chemokine binding	-	ISO	Function
GO:0030014	CCR4-NOT complex	-	IEA	Component
GO:0030014	CCR4-NOT complex	-	ISO	Component
GO:0030014	CCR4-NOT complex	-	ISS	Component
GO:0031072	heat shock protein binding	-	ISO	Function
GO:0031072	heat shock protein binding	-	ISS	Function
GO:0031086	nuclear-transcribed mRNA catabolic process, deadenylation-independent decay	-	ISO	Process
GO:0031086	nuclear-transcribed mRNA catabolic process, deadenylation-independent decay	-	ISS	Process
GO:0032680	regulation of tumor necrosis factor production	-	ISO	Process
GO:0032680	regulation of tumor necrosis factor production	-	ISS	Process
GO:0032897	negative regulation of viral transcription	-	ISO	Process
GO:0032897	negative regulation of viral transcription	-	ISS	Process
GO:0035278	miRNA mediated inhibition of translation	-	IEA	Process
GO:0035278	miRNA mediated inhibition of translation	-	ISO	Process
GO:0035278	miRNA mediated inhibition of translation	-	ISS	Process
GO:0035556	intracellular signal transduction	-	ISO	Process
GO:0035925	mRNA 3'-UTR AU-rich region binding	-	IEA	Function
GO:0035925	mRNA 3'-UTR AU-rich region binding	-	ISO	Function
GO:0035925	mRNA 3'-UTR AU-rich region binding	-	ISS	Function
GO:0038066	p38MAPK cascade	-	IEA	Process
GO:0038066	p38MAPK cascade	-	ISO	Process
GO:0038066	p38MAPK cascade	-	ISS	Process
GO:0042594	response to starvation	-	ISO	Process
GO:0042594	response to starvation	-	ISS	Process
GO:0043488	regulation of mRNA stability	-	ISO	Process
GO:0043488	regulation of mRNA stability	-	ISS	Process
GO:0044344	cellular response to fibroblast growth factor stimulus	-	IEA	Process
GO:0044344	cellular response to fibroblast growth factor stimulus	-	ISO	Process
GO:0044344	cellular response to fibroblast growth factor stimulus	-	ISS	Process
GO:0045085	negative regulation of interleukin-2 biosynthetic process	-	IEA	Process
GO:0045085	negative regulation of interleukin-2 biosynthetic process	-	ISO	Process
GO:0045085	negative regulation of interleukin-2 biosynthetic process	-	ISS	Process
GO:0045600	positive regulation of fat cell differentiation	-	IEA	Process
GO:0045600	positive regulation of fat cell differentiation	-	ISO	Process
GO:0045600	positive regulation of fat cell differentiation	-	ISS	Process
GO:0045616	regulation of keratinocyte differentiation	-	ISO	Process
GO:0045616	regulation of keratinocyte differentiation	-	ISS	Process
GO:0045638	negative regulation of myeloid cell differentiation	-	IEA	Process
GO:0045638	negative regulation of myeloid cell differentiation	-	ISO	Process
GO:0045647	negative regulation of erythrocyte differentiation	-	ISO	Process
GO:0045647	negative regulation of erythrocyte differentiation	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050728	negative regulation of inflammatory response	-	IEA	Process
GO:0050728	negative regulation of inflammatory response	-	ISO	Process
GO:0050779	RNA destabilization	-	ISO	Process
GO:0051028	mRNA transport	-	ISO	Process
GO:0051028	mRNA transport	-	ISS	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	IEA	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	ISO	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	ISS	Process
GO:0061014	positive regulation of mRNA catabolic process	-	ISO	Process
GO:0061014	positive regulation of mRNA catabolic process	-	ISS	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	21873635.	IBA	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	IEA	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	ISO	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	ISS	Process
GO:0070063	RNA polymerase binding	-	IEA	Function
GO:0070063	RNA polymerase binding	-	ISO	Function
GO:0070063	RNA polymerase binding	-	ISS	Function
GO:0070578	RISC-loading complex	-	ISO	Component
GO:0070578	RISC-loading complex	-	ISS	Component
GO:0070935	3'-UTR-mediated mRNA stabilization	-	ISO	Process
GO:0070935	3'-UTR-mediated mRNA stabilization	-	ISS	Process
GO:0071222	cellular response to lipopolysaccharide	-	IEA	Process
GO:0071222	cellular response to lipopolysaccharide	-	ISO	Process
GO:0071222	cellular response to lipopolysaccharide	-	ISS	Process
GO:0071356	cellular response to tumor necrosis factor	-	IEA	Process
GO:0071356	cellular response to tumor necrosis factor	-	ISO	Process
GO:0071356	cellular response to tumor necrosis factor	-	ISS	Process
GO:0071364	cellular response to epidermal growth factor stimulus	-	ISO	Process
GO:0071364	cellular response to epidermal growth factor stimulus	-	ISS	Process
GO:0071385	cellular response to glucocorticoid stimulus	-	ISO	Process
GO:0071385	cellular response to glucocorticoid stimulus	-	ISS	Process
GO:0071889	14-3-3 protein binding	-	IEA	Function
GO:0071889	14-3-3 protein binding	-	ISO	Function
GO:0071889	14-3-3 protein binding	-	ISS	Function
GO:0097011	cellular response to granulocyte macrophage colony-stimulating factor stimulus	-	ISO	Process
GO:0097011	cellular response to granulocyte macrophage colony-stimulating factor stimulus	-	ISS	Process
GO:0098745	Dcp1-Dcp2 complex	-	ISO	Component
GO:0098745	Dcp1-Dcp2 complex	-	ISS	Component
GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	ISO	Process
GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	ISS	Process
GO:1901835	positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA	-	ISO	Process
GO:1901835	positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA	-	ISS	Process
GO:1902172	regulation of keratinocyte apoptotic process	-	ISO	Process
GO:1902172	regulation of keratinocyte apoptotic process	-	ISS	Process
GO:1904246	negative regulation of polynucleotide adenylyltransferase activity	-	IEA	Process
GO:1904246	negative regulation of polynucleotide adenylyltransferase activity	-	ISO	Process
GO:1904246	negative regulation of polynucleotide adenylyltransferase activity	-	ISS	Process
GO:1904582	positive regulation of intracellular mRNA localization	-	ISO	Process
GO:1904582	positive regulation of intracellular mRNA localization	-	ISS	Process
GO:1990904	ribonucleoprotein complex	-	IEA	Component
GO:1990904	ribonucleoprotein complex	-	ISO	Component
GO:1990904	ribonucleoprotein complex	-	ISS	Component
GO:2000637	positive regulation of gene silencing by miRNA	-	ISO	Process
GO:2000637	positive regulation of gene silencing by miRNA	-	ISS	Process