EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000058430 (Gene tree)
Gene ID: 363001
Gene Symbol: Bcdin3d
Alias: LOC363001|RGD1306433
Full Name: BCDIN3 domain containing RNA methyltransferase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4568 bases
Position: chr7:141132133-141136700
Accession: 1306433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070196	Bin3	PF06859.12	1.4e-20	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091538	-	1227	-	ENSRNOP00000070196	285 (aa)	-	D4ABH7

Gene Model

Click here to download ENSRNOG00000058430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000058430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSG00000186666	BCDIN3D	95	81.227	Homo_sapiens
ENSRNOG00000058430	Bcdin3d	85	40.574	ENSAPOG00000011693	bcdin3d	81	43.602	Acanthochromis_polyacanthus
ENSRNOG00000058430	Bcdin3d	92	82.890	ENSAMEG00000001025	BCDIN3D	95	82.890	Ailuropoda_melanoleuca
ENSRNOG00000058430	Bcdin3d	85	49.793	ENSACIG00000014124	bcdin3d	93	47.561	Amphilophus_citrinellus
ENSRNOG00000058430	Bcdin3d	87	49.597	ENSAOCG00000021202	bcdin3d	88	49.597	Amphiprion_ocellaris
ENSRNOG00000058430	Bcdin3d	92	47.328	ENSAPEG00000011187	bcdin3d	93	47.328	Amphiprion_percula
ENSRNOG00000058430	Bcdin3d	85	48.963	ENSATEG00000025077	bcdin3d	88	48.963	Anabas_testudineus
ENSRNOG00000058430	Bcdin3d	65	64.894	ENSAPLG00000000887	BCDIN3D	100	64.894	Anas_platyrhynchos
ENSRNOG00000058430	Bcdin3d	85	65.041	ENSACAG00000008417	BCDIN3D	92	64.000	Anolis_carolinensis
ENSRNOG00000058430	Bcdin3d	100	79.514	ENSANAG00000038086	BCDIN3D	99	79.514	Aotus_nancymaae
ENSRNOG00000058430	Bcdin3d	93	47.348	ENSACLG00000021365	bcdin3d	99	44.981	Astatotilapia_calliptera
ENSRNOG00000058430	Bcdin3d	93	50.189	ENSAMXG00000004546	bcdin3d	97	50.189	Astyanax_mexicanus
ENSRNOG00000058430	Bcdin3d	99	81.139	ENSBTAG00000017781	BCDIN3D	80	81.139	Bos_taurus
ENSRNOG00000058430	Bcdin3d	100	78.819	ENSCJAG00000021042	BCDIN3D	99	78.819	Callithrix_jacchus
ENSRNOG00000058430	Bcdin3d	99	82.562	ENSCAFG00000008389	BCDIN3D	79	82.562	Canis_familiaris
ENSRNOG00000058430	Bcdin3d	99	82.562	ENSCAFG00020014478	BCDIN3D	96	82.562	Canis_lupus_dingo
ENSRNOG00000058430	Bcdin3d	99	80.783	ENSCHIG00000014358	BCDIN3D	96	80.783	Capra_hircus
ENSRNOG00000058430	Bcdin3d	99	79.715	ENSTSYG00000001190	BCDIN3D	96	79.715	Carlito_syrichta
ENSRNOG00000058430	Bcdin3d	88	84.000	ENSCPOG00000039774	BCDIN3D	96	84.000	Cavia_porcellus
ENSRNOG00000058430	Bcdin3d	99	79.094	ENSCCAG00000029244	BCDIN3D	98	79.094	Cebus_capucinus
ENSRNOG00000058430	Bcdin3d	97	80.505	ENSCATG00000044648	BCDIN3D	95	80.505	Cercocebus_atys
ENSRNOG00000058430	Bcdin3d	100	81.754	ENSCLAG00000000912	BCDIN3D	100	81.754	Chinchilla_lanigera
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSCSAG00000006048	BCDIN3D	95	81.227	Chlorocebus_sabaeus
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSCANG00000029922	BCDIN3D	94	81.227	Colobus_angolensis_palliatus
ENSRNOG00000058430	Bcdin3d	97	82.609	ENSCGRG00001007320	Bcdin3d	100	82.609	Cricetulus_griseus_chok1gshd
ENSRNOG00000058430	Bcdin3d	97	82.609	ENSCGRG00000001387	Bcdin3d	100	82.609	Cricetulus_griseus_crigri
ENSRNOG00000058430	Bcdin3d	92	48.289	ENSCSEG00000019757	bcdin3d	95	48.289	Cynoglossus_semilaevis
ENSRNOG00000058430	Bcdin3d	81	46.983	ENSCVAG00000018391	bcdin3d	93	47.718	Cyprinodon_variegatus
ENSRNOG00000058430	Bcdin3d	84	50.794	ENSDARG00000074111	bcdin3d	94	50.794	Danio_rerio
ENSRNOG00000058430	Bcdin3d	94	82.463	ENSDORG00000025460	Bcdin3d	97	82.463	Dipodomys_ordii
ENSRNOG00000058430	Bcdin3d	84	35.270	FBgn0035537	CG11342	97	34.855	Drosophila_melanogaster
ENSRNOG00000058430	Bcdin3d	98	77.224	ENSETEG00000008854	BCDIN3D	96	77.224	Echinops_telfairi
ENSRNOG00000058430	Bcdin3d	99	80.427	ENSEASG00005004210	BCDIN3D	84	80.427	Equus_asinus_asinus
ENSRNOG00000058430	Bcdin3d	99	80.427	ENSECAG00000020861	BCDIN3D	96	80.427	Equus_caballus
ENSRNOG00000058430	Bcdin3d	99	79.004	ENSEEUG00000001515	BCDIN3D	96	79.004	Erinaceus_europaeus
ENSRNOG00000058430	Bcdin3d	91	46.923	ENSELUG00000015623	bcdin3d	98	46.923	Esox_lucius
ENSRNOG00000058430	Bcdin3d	99	81.495	ENSFCAG00000009453	BCDIN3D	96	81.495	Felis_catus
ENSRNOG00000058430	Bcdin3d	99	80.427	ENSFDAG00000008477	BCDIN3D	96	80.427	Fukomys_damarensis
ENSRNOG00000058430	Bcdin3d	89	46.640	ENSFHEG00000012627	bcdin3d	98	46.640	Fundulus_heteroclitus
ENSRNOG00000058430	Bcdin3d	84	48.750	ENSGMOG00000013101	bcdin3d	98	48.760	Gadus_morhua
ENSRNOG00000058430	Bcdin3d	88	69.170	ENSGALG00000043400	BCDIN3D	93	69.170	Gallus_gallus
ENSRNOG00000058430	Bcdin3d	88	49.603	ENSGAFG00000001353	bcdin3d	86	49.603	Gambusia_affinis
ENSRNOG00000058430	Bcdin3d	84	48.536	ENSGACG00000005676	bcdin3d	98	48.536	Gasterosteus_aculeatus
ENSRNOG00000058430	Bcdin3d	70	61.576	ENSGAGG00000007915	BCDIN3D	81	61.576	Gopherus_agassizii
ENSRNOG00000058430	Bcdin3d	93	47.348	ENSHBUG00000003414	bcdin3d	98	46.183	Haplochromis_burtoni
ENSRNOG00000058430	Bcdin3d	99	79.004	ENSHGLG00000006401	BCDIN3D	96	79.004	Heterocephalus_glaber_female
ENSRNOG00000058430	Bcdin3d	99	75.089	ENSHGLG00100017051	BCDIN3D	96	75.089	Heterocephalus_glaber_male
ENSRNOG00000058430	Bcdin3d	88	47.431	ENSHCOG00000001123	bcdin3d	96	47.431	Hippocampus_comes
ENSRNOG00000058430	Bcdin3d	91	52.124	ENSIPUG00000009539	bcdin3d	95	52.124	Ictalurus_punctatus
ENSRNOG00000058430	Bcdin3d	93	81.887	ENSSTOG00000021275	BCDIN3D	99	81.887	Ictidomys_tridecemlineatus
ENSRNOG00000058430	Bcdin3d	99	79.577	ENSJJAG00000013981	Bcdin3d	99	79.577	Jaculus_jaculus
ENSRNOG00000058430	Bcdin3d	89	48.425	ENSKMAG00000014656	bcdin3d	98	48.425	Kryptolebias_marmoratus
ENSRNOG00000058430	Bcdin3d	87	48.594	ENSLBEG00000003408	bcdin3d	96	48.594	Labrus_bergylta
ENSRNOG00000058430	Bcdin3d	84	59.167	ENSLACG00000018048	BCDIN3D	96	57.509	Latimeria_chalumnae
ENSRNOG00000058430	Bcdin3d	89	50.198	ENSLOCG00000005406	bcdin3d	91	50.198	Lepisosteus_oculatus
ENSRNOG00000058430	Bcdin3d	99	80.783	ENSLAFG00000018388	BCDIN3D	99	80.783	Loxodonta_africana
ENSRNOG00000058430	Bcdin3d	97	80.505	ENSMFAG00000038249	BCDIN3D	95	80.505	Macaca_fascicularis
ENSRNOG00000058430	Bcdin3d	97	80.505	ENSMMUG00000022911	BCDIN3D	100	80.451	Macaca_mulatta
ENSRNOG00000058430	Bcdin3d	97	80.505	ENSMNEG00000029191	BCDIN3D	95	80.505	Macaca_nemestrina
ENSRNOG00000058430	Bcdin3d	97	80.866	ENSMLEG00000008159	BCDIN3D	95	80.866	Mandrillus_leucophaeus
ENSRNOG00000058430	Bcdin3d	85	50.207	ENSMAMG00000006088	bcdin3d	93	50.207	Mastacembelus_armatus
ENSRNOG00000058430	Bcdin3d	79	49.778	ENSMZEG00005004155	bcdin3d	83	46.957	Maylandia_zebra
ENSRNOG00000058430	Bcdin3d	95	84.559	ENSMAUG00000011271	Bcdin3d	85	84.926	Mesocricetus_auratus
ENSRNOG00000058430	Bcdin3d	99	82.562	ENSMICG00000031908	BCDIN3D	96	82.562	Microcebus_murinus
ENSRNOG00000058430	Bcdin3d	89	88.976	ENSMOCG00000019038	Bcdin3d	99	86.397	Microtus_ochrogaster
ENSRNOG00000058430	Bcdin3d	85	48.963	ENSMMOG00000004063	bcdin3d	94	48.963	Mola_mola
ENSRNOG00000058430	Bcdin3d	94	66.914	ENSMODG00000004282	BCDIN3D	97	66.914	Monodelphis_domestica
ENSRNOG00000058430	Bcdin3d	84	46.444	ENSMALG00000011642	bcdin3d	93	46.444	Monopterus_albus
ENSRNOG00000058430	Bcdin3d	100	90.877	MGP_CAROLIEiJ_G0020267	Bcdin3d	100	90.877	Mus_caroli
ENSRNOG00000058430	Bcdin3d	100	91.579	ENSMUSG00000037525	Bcdin3d	100	91.579	Mus_musculus
ENSRNOG00000058430	Bcdin3d	100	90.526	MGP_PahariEiJ_G0020270	Bcdin3d	100	90.526	Mus_pahari
ENSRNOG00000058430	Bcdin3d	100	91.228	MGP_SPRETEiJ_G0021162	Bcdin3d	100	91.228	Mus_spretus
ENSRNOG00000058430	Bcdin3d	95	82.288	ENSMPUG00000014557	BCDIN3D	99	82.288	Mustela_putorius_furo
ENSRNOG00000058430	Bcdin3d	97	82.246	ENSMLUG00000009857	BCDIN3D	95	82.246	Myotis_lucifugus
ENSRNOG00000058430	Bcdin3d	99	80.142	ENSNGAG00000014829	Bcdin3d	98	80.142	Nannospalax_galili
ENSRNOG00000058430	Bcdin3d	84	51.046	ENSNBRG00000007102	bcdin3d	93	48.361	Neolamprologus_brichardi
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSNLEG00000017818	BCDIN3D	94	81.227	Nomascus_leucogenys
ENSRNOG00000058430	Bcdin3d	99	72.340	ENSOPRG00000005446	BCDIN3D	99	72.340	Ochotona_princeps
ENSRNOG00000058430	Bcdin3d	99	80.071	ENSODEG00000009705	BCDIN3D	95	80.071	Octodon_degus
ENSRNOG00000058430	Bcdin3d	93	47.348	ENSONIG00000006870	bcdin3d	95	44.981	Oreochromis_niloticus
ENSRNOG00000058430	Bcdin3d	86	63.158	ENSOANG00000007743	BCDIN3D	84	62.992	Ornithorhynchus_anatinus
ENSRNOG00000058430	Bcdin3d	93	81.579	ENSOCUG00000001545	BCDIN3D	99	81.579	Oryctolagus_cuniculus
ENSRNOG00000058430	Bcdin3d	85	50.207	ENSORLG00000022941	bcdin3d	80	50.207	Oryzias_latipes
ENSRNOG00000058430	Bcdin3d	85	49.793	ENSORLG00020013764	bcdin3d	93	49.793	Oryzias_latipes_hni
ENSRNOG00000058430	Bcdin3d	85	50.207	ENSORLG00015009027	bcdin3d	79	50.207	Oryzias_latipes_hsok
ENSRNOG00000058430	Bcdin3d	85	50.207	ENSOMEG00000013355	bcdin3d	85	50.207	Oryzias_melastigma
ENSRNOG00000058430	Bcdin3d	99	82.206	ENSOGAG00000013908	BCDIN3D	97	82.206	Otolemur_garnettii
ENSRNOG00000058430	Bcdin3d	86	80.894	ENSOGAG00000028083	-	96	80.894	Otolemur_garnettii
ENSRNOG00000058430	Bcdin3d	100	79.649	ENSOARG00000018239	-	97	79.649	Ovis_aries
ENSRNOG00000058430	Bcdin3d	99	73.050	ENSOARG00000015498	-	96	70.526	Ovis_aries
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSPPAG00000019278	BCDIN3D	94	81.227	Pan_paniscus
ENSRNOG00000058430	Bcdin3d	99	81.495	ENSPPRG00000001284	BCDIN3D	96	81.495	Panthera_pardus
ENSRNOG00000058430	Bcdin3d	99	81.495	ENSPTIG00000013513	BCDIN3D	96	81.495	Panthera_tigris_altaica
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSPTRG00000004916	BCDIN3D	94	81.227	Pan_troglodytes
ENSRNOG00000058430	Bcdin3d	84	51.667	ENSPKIG00000024617	bcdin3d	82	51.667	Paramormyrops_kingsleyae
ENSRNOG00000058430	Bcdin3d	93	47.368	ENSPMGG00000001614	bcdin3d	95	46.992	Periophthalmus_magnuspinnatus
ENSRNOG00000058430	Bcdin3d	94	86.567	ENSPEMG00000011046	Bcdin3d	99	84.561	Peromyscus_maniculatus_bairdii
ENSRNOG00000058430	Bcdin3d	94	67.658	ENSPCIG00000026825	BCDIN3D	99	66.912	Phascolarctos_cinereus
ENSRNOG00000058430	Bcdin3d	88	49.004	ENSPFOG00000012788	bcdin3d	86	49.004	Poecilia_formosa
ENSRNOG00000058430	Bcdin3d	88	49.402	ENSPLAG00000017261	bcdin3d	98	49.402	Poecilia_latipinna
ENSRNOG00000058430	Bcdin3d	88	49.402	ENSPMEG00000003765	bcdin3d	86	49.402	Poecilia_mexicana
ENSRNOG00000058430	Bcdin3d	85	51.037	ENSPREG00000010840	bcdin3d	92	51.037	Poecilia_reticulata
ENSRNOG00000058430	Bcdin3d	97	80.505	ENSPPYG00000004498	BCDIN3D	95	80.505	Pongo_abelii
ENSRNOG00000058430	Bcdin3d	99	82.206	ENSPCOG00000025127	BCDIN3D	96	82.206	Propithecus_coquereli
ENSRNOG00000058430	Bcdin3d	97	80.866	ENSPVAG00000015495	BCDIN3D	96	79.715	Pteropus_vampyrus
ENSRNOG00000058430	Bcdin3d	93	46.970	ENSPNYG00000006788	bcdin3d	99	46.970	Pundamilia_nyererei
ENSRNOG00000058430	Bcdin3d	89	53.543	ENSPNAG00000023242	bcdin3d	96	53.543	Pygocentrus_nattereri
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSRBIG00000044388	BCDIN3D	95	81.227	Rhinopithecus_bieti
ENSRNOG00000058430	Bcdin3d	97	81.227	ENSRROG00000024941	BCDIN3D	96	81.227	Rhinopithecus_roxellana
ENSRNOG00000058430	Bcdin3d	100	79.167	ENSSBOG00000035511	BCDIN3D	99	79.167	Saimiri_boliviensis_boliviensis
ENSRNOG00000058430	Bcdin3d	90	71.984	ENSSHAG00000011007	BCDIN3D	93	71.984	Sarcophilus_harrisii
ENSRNOG00000058430	Bcdin3d	85	52.245	ENSSFOG00015006870	bcdin3d	91	52.245	Scleropages_formosus
ENSRNOG00000058430	Bcdin3d	85	47.718	ENSSMAG00000010097	bcdin3d	93	47.718	Scophthalmus_maximus
ENSRNOG00000058430	Bcdin3d	85	49.174	ENSSDUG00000017056	bcdin3d	94	49.174	Seriola_dumerili
ENSRNOG00000058430	Bcdin3d	67	46.632	ENSSLDG00000020553	bcdin3d	80	46.632	Seriola_lalandi_dorsalis
ENSRNOG00000058430	Bcdin3d	99	75.265	ENSSARG00000005361	BCDIN3D	97	75.265	Sorex_araneus
ENSRNOG00000058430	Bcdin3d	86	67.339	ENSSPUG00000007468	BCDIN3D	93	67.339	Sphenodon_punctatus
ENSRNOG00000058430	Bcdin3d	88	48.031	ENSSPAG00000021374	bcdin3d	98	48.031	Stegastes_partitus
ENSRNOG00000058430	Bcdin3d	99	81.139	ENSSSCG00000040144	BCDIN3D	93	81.139	Sus_scrofa
ENSRNOG00000058430	Bcdin3d	65	62.963	ENSTGUG00000004142	BCDIN3D	100	62.963	Taeniopygia_guttata
ENSRNOG00000058430	Bcdin3d	85	49.793	ENSTRUG00000018395	bcdin3d	94	49.793	Takifugu_rubripes
ENSRNOG00000058430	Bcdin3d	71	82.178	ENSTBEG00000012924	BCDIN3D	95	82.178	Tupaia_belangeri
ENSRNOG00000058430	Bcdin3d	99	80.783	ENSTTRG00000001001	BCDIN3D	96	80.783	Tursiops_truncatus
ENSRNOG00000058430	Bcdin3d	99	82.206	ENSUAMG00000005624	BCDIN3D	96	82.206	Ursus_americanus
ENSRNOG00000058430	Bcdin3d	99	78.648	ENSUMAG00000007798	BCDIN3D	96	78.648	Ursus_maritimus
ENSRNOG00000058430	Bcdin3d	99	77.580	ENSVPAG00000002328	BCDIN3D	96	76.512	Vicugna_pacos
ENSRNOG00000058430	Bcdin3d	99	82.562	ENSVVUG00000023486	BCDIN3D	96	82.562	Vulpes_vulpes
ENSRNOG00000058430	Bcdin3d	91	43.446	ENSXCOG00000016458	bcdin3d	91	43.071	Xiphophorus_couchianus
ENSRNOG00000058430	Bcdin3d	87	49.393	ENSXMAG00000029177	bcdin3d	96	49.393	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001510	RNA methylation	-	ISO	Process
GO:0001510	RNA methylation	-	ISS	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008171	O-methyltransferase activity	21873635.	IBA	Function
GO:0008171	O-methyltransferase activity	-	ISO	Function
GO:0008171	O-methyltransferase activity	-	ISS	Function
GO:0008173	RNA methyltransferase activity	21873635.	IBA	Function
GO:0008173	RNA methyltransferase activity	-	ISO	Function
GO:0008173	RNA methyltransferase activity	-	ISS	Function
GO:0008175	tRNA methyltransferase activity	-	ISO	Function
GO:0008175	tRNA methyltransferase activity	-	ISS	Function
GO:0010586	miRNA metabolic process	21873635.	IBA	Process
GO:0010586	miRNA metabolic process	-	ISO	Process
GO:0010586	miRNA metabolic process	-	ISS	Process
GO:0030488	tRNA methylation	-	ISO	Process
GO:0030488	tRNA methylation	-	ISS	Process
GO:0061715	miRNA 2'-O-methylation	-	ISO	Process
GO:0061715	miRNA 2'-O-methylation	-	ISS	Process
GO:2000632	negative regulation of pre-miRNA processing	21873635.	IBA	Process
GO:2000632	negative regulation of pre-miRNA processing	-	ISO	Process
GO:2000632	negative regulation of pre-miRNA processing	-	ISS	Process