EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000058909 (Gene tree)
Gene ID
103689992
Gene Symbol
Rps9l1
Alias
LOC100909466
Full Name
ribosomal protein S9-like 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
71897 bases
Position
chr1:64018125-64090021
Accession
9089855
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000074779S4PF01479.252.2e-1111
ENSRNOP00000075462S4PF01479.252.2e-1111
ENSRNOP00000072986S4PF01479.251.7e-0511
ENSRNOP00000072986Ribosomal_S4PF00163.195.1e-0611
ENSRNOP00000074779Ribosomal_S4PF00163.198.4e-0611
ENSRNOP00000075462Ribosomal_S4PF00163.198.4e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000086622-747-ENSRNOP00000074779194 (aa)-P29314
ENSRNOT00000091654-1695-ENSRNOP00000072986136 (aa)-A0A0G2K4C4
ENSRNOT00000090819-585XM_008758836ENSRNOP00000075462194 (aa)XP_008757058P29314
Gene Model
Click here to download ENSRNOG00000058909's gene model file
Pathways
Pathway IDPathway NameSource
rno03010RibosomeKEGG
rno03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000058909's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000058909Rps9l110095.876ENSRNOG00000039203AABR07040892.110095.876
ENSRNOG00000058909Rps9l18130.909ENSRNOG00000017460Imp36632.520
ENSRNOG00000058909Rps9l110095.361ENSRNOG00000050067AABR07026058.110095.361
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000058909Rps9l1100100.000ENSG00000170889RPS9100100.000Homo_sapiens
ENSRNOG00000058909Rps9l110098.529ENSAPOG00000016312rps910097.423Acanthochromis_polyacanthus
ENSRNOG00000058909Rps9l1100100.000ENSAMEG00000004630RPS9100100.000Ailuropoda_melanoleuca
ENSRNOG00000058909Rps9l110098.529ENSAOCG00000021159rps910097.423Amphiprion_ocellaris
ENSRNOG00000058909Rps9l110098.529ENSAPEG00000008214rps910097.423Amphiprion_percula
ENSRNOG00000058909Rps9l110097.794ENSATEG00000022661rps910096.907Anabas_testudineus
ENSRNOG00000058909Rps9l110099.265ENSACAG00000016566RPS910098.454Anolis_carolinensis
ENSRNOG00000058909Rps9l15886.076ENSANAG00000020343-9886.076Aotus_nancymaae
ENSRNOG00000058909Rps9l1100100.000ENSANAG00000004180RPS9100100.000Aotus_nancymaae
ENSRNOG00000058909Rps9l110098.529ENSACLG00000021384rps910097.423Astatotilapia_calliptera
ENSRNOG00000058909Rps9l110096.324ENSAMXG00000010402rps910096.324Astyanax_mexicanus
ENSRNOG00000058909Rps9l1100100.000ENSBTAG00000006487RPS9100100.000Bos_taurus
ENSRNOG00000058909Rps9l19582.946WBGene00004478rps-99083.529Caenorhabditis_elegans
ENSRNOG00000058909Rps9l110096.324ENSCJAG00000017658-8695.270Callithrix_jacchus
ENSRNOG00000058909Rps9l1100100.000ENSCJAG00000001130-95100.000Callithrix_jacchus
ENSRNOG00000058909Rps9l1100100.000ENSCAFG00000002652RPS9100100.000Canis_familiaris
ENSRNOG00000058909Rps9l1100100.000ENSCAFG00020018329RPS9100100.000Canis_lupus_dingo
ENSRNOG00000058909Rps9l110095.588ENSCHIG00000026324-9495.588Capra_hircus
ENSRNOG00000058909Rps9l1100100.000ENSCHIG00000024085RPS9100100.000Capra_hircus
ENSRNOG00000058909Rps9l1100100.000ENSTSYG00000012074-100100.000Carlito_syrichta
ENSRNOG00000058909Rps9l16499.194ENSCAPG00000013312RPS97799.194Cavia_aperea
ENSRNOG00000058909Rps9l1100100.000ENSCPOG00000020893RPS9100100.000Cavia_porcellus
ENSRNOG00000058909Rps9l1100100.000ENSCCAG00000007081-100100.000Cebus_capucinus
ENSRNOG00000058909Rps9l1100100.000ENSCATG00000029320RPS9100100.000Cercocebus_atys
ENSRNOG00000058909Rps9l1100100.000ENSCLAG00000000504RPS9100100.000Chinchilla_lanigera
ENSRNOG00000058909Rps9l1100100.000ENSCSAG00000018755-10099.485Chlorocebus_sabaeus
ENSRNOG00000058909Rps9l19297.765ENSCPBG00000018251RPS99897.765Chrysemys_picta_bellii
ENSRNOG00000058909Rps9l110091.176ENSCING00000021248-9989.175Ciona_intestinalis
ENSRNOG00000058909Rps9l19991.045ENSCSAVG00000003644-9991.045Ciona_savignyi
ENSRNOG00000058909Rps9l19982.734ENSCANG00000036954-7883.673Colobus_angolensis_palliatus
ENSRNOG00000058909Rps9l1100100.000ENSCANG00000036604RPS9100100.000Colobus_angolensis_palliatus
ENSRNOG00000058909Rps9l1100100.000ENSCGRG00001001119Rps9100100.000Cricetulus_griseus_chok1gshd
ENSRNOG00000058909Rps9l110085.567ENSCGRG00000000157-10085.567Cricetulus_griseus_crigri
ENSRNOG00000058909Rps9l110098.529ENSCSEG00000018918rps910097.423Cynoglossus_semilaevis
ENSRNOG00000058909Rps9l110098.529ENSCVAG00000007999rps910097.423Cyprinodon_variegatus
ENSRNOG00000058909Rps9l110095.588ENSDARG00000011405rps910095.556Danio_rerio
ENSRNOG00000058909Rps9l1100100.000ENSDNOG00000044158RPS9100100.000Dasypus_novemcinctus
ENSRNOG00000058909Rps9l1100100.000ENSDORG00000015828Rps9100100.000Dipodomys_ordii
ENSRNOG00000058909Rps9l19589.922FBgn0010408RpS99489.922Drosophila_melanogaster
ENSRNOG00000058909Rps9l110077.835ENSETEG00000009696RPS910077.835Echinops_telfairi
ENSRNOG00000058909Rps9l110095.588ENSEBUG00000011539rps910092.821Eptatretus_burgeri
ENSRNOG00000058909Rps9l1100100.000ENSECAG00000020316RPS9100100.000Equus_caballus
ENSRNOG00000058909Rps9l110098.529ENSELUG00000015000rps910096.907Esox_lucius
ENSRNOG00000058909Rps9l1100100.000ENSFCAG00000014048RPS9100100.000Felis_catus
ENSRNOG00000058909Rps9l1100100.000ENSFDAG00000007469RPS9100100.000Fukomys_damarensis
ENSRNOG00000058909Rps9l110098.529ENSFHEG00000016569rps910097.423Fundulus_heteroclitus
ENSRNOG00000058909Rps9l110097.794ENSGMOG00000005074rps910096.392Gadus_morhua
ENSRNOG00000058909Rps9l110098.529ENSGAFG00000013201rps910097.423Gambusia_affinis
ENSRNOG00000058909Rps9l110098.529ENSGACG00000010761rps910096.907Gasterosteus_aculeatus
ENSRNOG00000058909Rps9l110099.265ENSGAGG00000002562RPS910097.938Gopherus_agassizii
ENSRNOG00000058909Rps9l1100100.000ENSGGOG00000027839-100100.000Gorilla_gorilla
ENSRNOG00000058909Rps9l110088.660ENSGGOG00000025810-10088.660Gorilla_gorilla
ENSRNOG00000058909Rps9l110096.324ENSGGOG00000042271-10095.876Gorilla_gorilla
ENSRNOG00000058909Rps9l19796.970ENSGGOG00000025031-8396.970Gorilla_gorilla
ENSRNOG00000058909Rps9l110098.529ENSHBUG00000013399rps910097.423Haplochromis_burtoni
ENSRNOG00000058909Rps9l1100100.000ENSHGLG00000017784RPS9100100.000Heterocephalus_glaber_female
ENSRNOG00000058909Rps9l1100100.000ENSHGLG00100003924RPS9100100.000Heterocephalus_glaber_male
ENSRNOG00000058909Rps9l110097.059ENSHCOG00000020779rps910095.876Hippocampus_comes
ENSRNOG00000058909Rps9l110097.794ENSIPUG00000000061rps910097.423Ictalurus_punctatus
ENSRNOG00000058909Rps9l1100100.000ENSSTOG00000020325RPS9100100.000Ictidomys_tridecemlineatus
ENSRNOG00000058909Rps9l110085.052ENSJJAG00000015488-10085.052Jaculus_jaculus
ENSRNOG00000058909Rps9l1100100.000ENSJJAG00000015795-100100.000Jaculus_jaculus
ENSRNOG00000058909Rps9l110095.876ENSJJAG00000013812-10095.876Jaculus_jaculus
ENSRNOG00000058909Rps9l110098.529ENSKMAG00000005101rps910097.423Kryptolebias_marmoratus
ENSRNOG00000058909Rps9l110098.529ENSLBEG00000017125rps910097.423Labrus_bergylta
ENSRNOG00000058909Rps9l110099.265ENSLACG00000011099RPS99998.551Latimeria_chalumnae
ENSRNOG00000058909Rps9l110074.227ENSLOCG00000008007rps910074.227Lepisosteus_oculatus
ENSRNOG00000058909Rps9l1100100.000ENSLAFG00000010760RPS9100100.000Loxodonta_africana
ENSRNOG00000058909Rps9l1100100.000ENSMFAG00000033649RPS9100100.000Macaca_fascicularis
ENSRNOG00000058909Rps9l1100100.000ENSMMUG00000022552RPS9100100.000Macaca_mulatta
ENSRNOG00000058909Rps9l1100100.000ENSMNEG00000013713RPS9100100.000Macaca_nemestrina
ENSRNOG00000058909Rps9l1100100.000ENSMLEG00000023735RPS9100100.000Mandrillus_leucophaeus
ENSRNOG00000058909Rps9l110098.529ENSMAMG00000019474rps910097.423Mastacembelus_armatus
ENSRNOG00000058909Rps9l110098.529ENSMZEG00005016370rps910097.423Maylandia_zebra
ENSRNOG00000058909Rps9l1100100.000ENSMAUG00000016938Rps9100100.000Mesocricetus_auratus
ENSRNOG00000058909Rps9l1100100.000ENSMICG00000014928RPS9100100.000Microcebus_murinus
ENSRNOG00000058909Rps9l1100100.000ENSMOCG00000010762Rps9100100.000Microtus_ochrogaster
ENSRNOG00000058909Rps9l1100100.000ENSMOCG00000004350-10098.980Microtus_ochrogaster
ENSRNOG00000058909Rps9l110094.118ENSMOCG00000006744-10093.264Microtus_ochrogaster
ENSRNOG00000058909Rps9l110098.529ENSMMOG00000016468rps910096.907Mola_mola
ENSRNOG00000058909Rps9l110079.381ENSMODG00000003974RPS910079.381Monodelphis_domestica
ENSRNOG00000058909Rps9l110097.794ENSMALG00000009363rps910096.907Monopterus_albus
ENSRNOG00000058909Rps9l1100100.000MGP_CAROLIEiJ_G0029100Rps9100100.000Mus_caroli
ENSRNOG00000058909Rps9l1100100.000ENSMUSG00000006333Rps9100100.000Mus_musculus
ENSRNOG00000058909Rps9l110099.485MGP_PahariEiJ_G0020969Rps910099.485Mus_pahari
ENSRNOG00000058909Rps9l1100100.000MGP_SPRETEiJ_G0030153Rps9100100.000Mus_spretus
ENSRNOG00000058909Rps9l110094.161ENSMPUG00000019169-10091.795Mustela_putorius_furo
ENSRNOG00000058909Rps9l1100100.000ENSMPUG00000010394RPS9100100.000Mustela_putorius_furo
ENSRNOG00000058909Rps9l110098.969ENSMLUG00000002154-10098.969Myotis_lucifugus
ENSRNOG00000058909Rps9l110099.485ENSMLUG00000016897-10099.485Myotis_lucifugus
ENSRNOG00000058909Rps9l1100100.000ENSNGAG00000023394Rps9100100.000Nannospalax_galili
ENSRNOG00000058909Rps9l110083.824ENSNGAG00000017852-9691.304Nannospalax_galili
ENSRNOG00000058909Rps9l110098.529ENSNBRG00000003450rps910097.423Neolamprologus_brichardi
ENSRNOG00000058909Rps9l1100100.000ENSNLEG00000006314RPS9100100.000Nomascus_leucogenys
ENSRNOG00000058909Rps9l110094.853ENSNLEG00000035027-9794.161Nomascus_leucogenys
ENSRNOG00000058909Rps9l110097.794ENSNLEG00000018247-9996.403Nomascus_leucogenys
ENSRNOG00000058909Rps9l1100100.000ENSOPRG00000001628-100100.000Ochotona_princeps
ENSRNOG00000058909Rps9l110094.330ENSODEG00000019680-10094.330Octodon_degus
ENSRNOG00000058909Rps9l110083.088ENSODEG00000016631-8983.871Octodon_degus
ENSRNOG00000058909Rps9l110095.876ENSODEG00000019010-10095.876Octodon_degus
ENSRNOG00000058909Rps9l1100100.000ENSODEG00000002087-100100.000Octodon_degus
ENSRNOG00000058909Rps9l110091.176ENSODEG00000019411-10090.722Octodon_degus
ENSRNOG00000058909Rps9l110098.529ENSONIG00000012752rps910097.423Oreochromis_niloticus
ENSRNOG00000058909Rps9l110099.265ENSOANG00000014748-10099.265Ornithorhynchus_anatinus
ENSRNOG00000058909Rps9l110097.059ENSORLG00000011258rps910096.392Oryzias_latipes
ENSRNOG00000058909Rps9l110097.059ENSORLG00020007734rps910096.392Oryzias_latipes_hni
ENSRNOG00000058909Rps9l110097.059ENSORLG00015013498rps99796.350Oryzias_latipes_hsok
ENSRNOG00000058909Rps9l110097.794ENSOMEG00000010547rps910096.907Oryzias_melastigma
ENSRNOG00000058909Rps9l1100100.000ENSOGAG00000006813RPS9100100.000Otolemur_garnettii
ENSRNOG00000058909Rps9l110097.059ENSOARG00000010831-9895.480Ovis_aries
ENSRNOG00000058909Rps9l1100100.000ENSOARG00000002753-10097.938Ovis_aries
ENSRNOG00000058909Rps9l1100100.000ENSPPAG00000028401RPS9100100.000Pan_paniscus
ENSRNOG00000058909Rps9l110084.559ENSPPAG00000043211-10079.381Pan_paniscus
ENSRNOG00000058909Rps9l1100100.000ENSPPRG00000011810RPS9100100.000Panthera_pardus
ENSRNOG00000058909Rps9l19987.500ENSPTIG00000010169RPS983100.000Panthera_tigris_altaica
ENSRNOG00000058909Rps9l110088.971ENSPTRG00000045479-10082.474Pan_troglodytes
ENSRNOG00000058909Rps9l1100100.000ENSPTRG00000050995-100100.000Pan_troglodytes
ENSRNOG00000058909Rps9l1100100.000ENSPTRG00000011449RPS9100100.000Pan_troglodytes
ENSRNOG00000058909Rps9l110097.059ENSPTRG00000041697-9492.414Pan_troglodytes
ENSRNOG00000058909Rps9l110082.990ENSPANG00000011359RPS910082.990Papio_anubis
ENSRNOG00000058909Rps9l110092.784ENSPSIG00000005938RPS910092.784Pelodiscus_sinensis
ENSRNOG00000058909Rps9l110098.529ENSPMGG00000012078rps910097.423Periophthalmus_magnuspinnatus
ENSRNOG00000058909Rps9l1100100.000ENSPEMG00000013302-100100.000Peromyscus_maniculatus_bairdii
ENSRNOG00000058909Rps9l110096.324ENSPMAG00000000193-10093.814Petromyzon_marinus
ENSRNOG00000058909Rps9l1100100.000ENSPCIG00000023372RPS910098.969Phascolarctos_cinereus
ENSRNOG00000058909Rps9l110097.810ENSPFOG00000009299rps910096.923Poecilia_formosa
ENSRNOG00000058909Rps9l110098.529ENSPLAG00000012829rps910097.423Poecilia_latipinna
ENSRNOG00000058909Rps9l110098.529ENSPMEG00000017606rps910097.423Poecilia_mexicana
ENSRNOG00000058909Rps9l110098.529ENSPREG00000007924rps910098.529Poecilia_reticulata
ENSRNOG00000058909Rps9l1100100.000ENSPPYG00000010377RPS9100100.000Pongo_abelii
ENSRNOG00000058909Rps9l1100100.000ENSPCAG00000012395RPS910097.884Procavia_capensis
ENSRNOG00000058909Rps9l1100100.000ENSPCOG00000013987RPS9100100.000Propithecus_coquereli
ENSRNOG00000058909Rps9l110067.526ENSPVAG00000015571RPS910067.526Pteropus_vampyrus
ENSRNOG00000058909Rps9l110098.529ENSPNYG00000002115rps910097.423Pundamilia_nyererei
ENSRNOG00000058909Rps9l110098.529ENSPNAG00000011249rps910097.423Pygocentrus_nattereri
ENSRNOG00000058909Rps9l110088.660ENSRBIG00000042902-10088.660Rhinopithecus_bieti
ENSRNOG00000058909Rps9l110094.118ENSRBIG00000040750-8694.118Rhinopithecus_bieti
ENSRNOG00000058909Rps9l1100100.000ENSRBIG00000041681RPS9100100.000Rhinopithecus_bieti
ENSRNOG00000058909Rps9l1100100.000ENSRROG00000036731RPS9100100.000Rhinopithecus_roxellana
ENSRNOG00000058909Rps9l110094.118ENSRROG00000043910-8794.161Rhinopithecus_roxellana
ENSRNOG00000058909Rps9l110078.866ENSRROG00000030184-10078.866Rhinopithecus_roxellana
ENSRNOG00000058909Rps9l19276.800YBR189WRPS9B9471.196Saccharomyces_cerevisiae
ENSRNOG00000058909Rps9l19276.000YPL081WRPS9A9370.109Saccharomyces_cerevisiae
ENSRNOG00000058909Rps9l1100100.000ENSSBOG00000015501-100100.000Saimiri_boliviensis_boliviensis
ENSRNOG00000058909Rps9l110072.680ENSSBOG00000024187-10072.680Saimiri_boliviensis_boliviensis
ENSRNOG00000058909Rps9l110098.529ENSSFOG00015000650rps910097.938Scleropages_formosus
ENSRNOG00000058909Rps9l110098.529ENSSMAG00000013149rps910097.423Scophthalmus_maximus
ENSRNOG00000058909Rps9l110098.529ENSSDUG00000008689rps910097.423Seriola_dumerili
ENSRNOG00000058909Rps9l110098.529ENSSLDG00000022240rps910097.423Seriola_lalandi_dorsalis
ENSRNOG00000058909Rps9l110095.876ENSSARG00000010223-10095.876Sorex_araneus
ENSRNOG00000058909Rps9l1100100.000ENSSARG00000005909RPS9100100.000Sorex_araneus
ENSRNOG00000058909Rps9l1100100.000ENSSPUG00000008604RPS910099.485Sphenodon_punctatus
ENSRNOG00000058909Rps9l110098.529ENSSPAG00000016660rps910097.423Stegastes_partitus
ENSRNOG00000058909Rps9l1100100.000ENSSSCG00000029785RPS9100100.000Sus_scrofa
ENSRNOG00000058909Rps9l110097.794ENSTRUG00000015896rps910096.392Takifugu_rubripes
ENSRNOG00000058909Rps9l110088.660ENSTBEG00000003585RPS910088.660Tupaia_belangeri
ENSRNOG00000058909Rps9l190100.000ENSTTRG00000006572RPS9100100.000Tursiops_truncatus
ENSRNOG00000058909Rps9l1100100.000ENSUMAG00000010897RPS910097.842Ursus_maritimus
ENSRNOG00000058909Rps9l1100100.000ENSVVUG00000008202-100100.000Vulpes_vulpes
ENSRNOG00000058909Rps9l110098.969ENSXETG00000009030rps910098.969Xenopus_tropicalis
ENSRNOG00000058909Rps9l110098.529ENSXMAG00000012175rps910097.423Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome-IEAFunction
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0006412translation-IEAProcess
GO:0006412translation-ISOProcess
GO:0008150biological_process-NDProcess
GO:0008284positive regulation of cell proliferation-ISOProcess
GO:0015935small ribosomal subunit-IEAComponent
GO:0019843rRNA binding21873635.IBAFunction
GO:0019843rRNA binding-IEAFunction
GO:0022627cytosolic small ribosomal subunit21873635.IBAComponent
GO:0022627cytosolic small ribosomal subunit925037.947902.6196023.IDAComponent
GO:0022627cytosolic small ribosomal subunit-ISOComponent
GO:0045182translation regulator activity-ISOFunction
GO:0045202synapse-ISOComponent
GO:0045903positive regulation of translational fidelity21873635.IBAProcess
GO:1990904ribonucleoprotein complex-ISOComponent
GO:1990904ribonucleoprotein complex-ISSComponent
GO:19909325.8S rRNA binding7251593.IDAFunction
GO:0003735structural constituent of ribosome-IEAFunction
GO:0006412translation-IEAProcess
GO:0015935small ribosomal subunit-IEAComponent
GO:0019843rRNA binding-IEAFunction
GO:1990904ribonucleoprotein complex-ISSComponent

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