EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000059097 (Gene tree)
Gene ID: -
Gene Symbol: AABR07025140.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 102222 bases
Position: chr16:29834086-29936307
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074057	ResIII	PF04851.15	5.6e-11	1	1
ENSRNOP00000074057	DEAD	PF00270.29	6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000088707	AABR07025140.1-201	4122	-	ENSRNOP00000074057	1374 (aa)	-	A0A0G2K744

Gene Model

Click here to download ENSRNOG00000059097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059097	AABR07025140.1	99	73.012	ENSG00000137628	DDX60	99	69.903	Homo_sapiens
ENSRNOG00000059097	AABR07025140.1	99	72.476	ENSAMEG00000013429	DDX60	80	72.476	Ailuropoda_melanoleuca
ENSRNOG00000059097	AABR07025140.1	78	54.512	ENSAPLG00000007120	DDX60	78	54.529	Anas_platyrhynchos
ENSRNOG00000059097	AABR07025140.1	99	53.233	ENSACAG00000016010	DDX60	78	53.147	Anolis_carolinensis
ENSRNOG00000059097	AABR07025140.1	99	73.012	ENSANAG00000030883	DDX60	80	73.012	Aotus_nancymaae
ENSRNOG00000059097	AABR07025140.1	99	72.575	ENSCJAG00000004726	DDX60	78	74.954	Callithrix_jacchus
ENSRNOG00000059097	AABR07025140.1	99	71.855	ENSCAFG00000009003	DDX60	80	71.855	Canis_familiaris
ENSRNOG00000059097	AABR07025140.1	72	71.241	ENSTSYG00000011545	-	98	71.544	Carlito_syrichta
ENSRNOG00000059097	AABR07025140.1	99	62.017	ENSCAPG00000006504	DDX60	82	62.017	Cavia_aperea
ENSRNOG00000059097	AABR07025140.1	99	71.782	ENSCPOG00000008326	DDX60	80	71.782	Cavia_porcellus
ENSRNOG00000059097	AABR07025140.1	99	73.085	ENSCCAG00000034674	DDX60	80	73.085	Cebus_capucinus
ENSRNOG00000059097	AABR07025140.1	99	73.377	ENSCATG00000038859	DDX60	80	73.377	Cercocebus_atys
ENSRNOG00000059097	AABR07025140.1	99	70.691	ENSCLAG00000015332	DDX60	80	70.691	Chinchilla_lanigera
ENSRNOG00000059097	AABR07025140.1	99	73.158	ENSCSAG00000003155	DDX60	80	73.158	Chlorocebus_sabaeus
ENSRNOG00000059097	AABR07025140.1	87	79.775	ENSCPBG00000001510	-	78	76.636	Chrysemys_picta_bellii
ENSRNOG00000059097	AABR07025140.1	99	58.248	ENSCPBG00000027534	DDX60	78	58.116	Chrysemys_picta_bellii
ENSRNOG00000059097	AABR07025140.1	99	73.523	ENSCANG00000032267	DDX60	80	73.523	Colobus_angolensis_palliatus
ENSRNOG00000059097	AABR07025140.1	99	80.465	ENSCGRG00001018201	Ddx60	80	80.465	Cricetulus_griseus_chok1gshd
ENSRNOG00000059097	AABR07025140.1	99	80.465	ENSCGRG00000005295	Ddx60	80	80.465	Cricetulus_griseus_crigri
ENSRNOG00000059097	AABR07025140.1	99	71.335	ENSDNOG00000008454	DDX60	80	71.408	Dasypus_novemcinctus
ENSRNOG00000059097	AABR07025140.1	99	73.431	ENSEASG00005021849	DDX60	80	73.504	Equus_asinus_asinus
ENSRNOG00000059097	AABR07025140.1	99	50.579	ENSECAG00000032492	-	80	50.579	Equus_caballus
ENSRNOG00000059097	AABR07025140.1	99	73.650	ENSECAG00000024167	DDX60	79	73.723	Equus_caballus
ENSRNOG00000059097	AABR07025140.1	95	57.393	ENSEEUG00000010236	DDX60	77	57.393	Erinaceus_europaeus
ENSRNOG00000059097	AABR07025140.1	99	72.283	ENSFCAG00000010766	DDX60	79	72.283	Felis_catus
ENSRNOG00000059097	AABR07025140.1	100	52.098	ENSGALG00000009639	DDX60	75	52.098	Gallus_gallus
ENSRNOG00000059097	AABR07025140.1	93	71.697	ENSGGOG00000012801	DDX60	79	71.697	Gorilla_gorilla
ENSRNOG00000059097	AABR07025140.1	99	72.456	ENSHGLG00000013790	DDX60	97	72.456	Heterocephalus_glaber_female
ENSRNOG00000059097	AABR07025140.1	99	72.602	ENSHGLG00100002763	-	97	72.602	Heterocephalus_glaber_male
ENSRNOG00000059097	AABR07025140.1	84	73.575	ENSSTOG00000016257	DDX60	78	73.661	Ictidomys_tridecemlineatus
ENSRNOG00000059097	AABR07025140.1	67	54.644	ENSLACG00000017399	DDX60	74	54.644	Latimeria_chalumnae
ENSRNOG00000059097	AABR07025140.1	99	73.304	ENSMFAG00000016136	DDX60	80	73.304	Macaca_fascicularis
ENSRNOG00000059097	AABR07025140.1	99	73.304	ENSMMUG00000001880	DDX60	80	73.304	Macaca_mulatta
ENSRNOG00000059097	AABR07025140.1	99	73.484	ENSMNEG00000030573	DDX60	81	73.484	Macaca_nemestrina
ENSRNOG00000059097	AABR07025140.1	99	73.377	ENSMLEG00000030919	DDX60	81	73.377	Mandrillus_leucophaeus
ENSRNOG00000059097	AABR07025140.1	99	51.836	ENSMGAG00000002432	DDX60	81	51.836	Meleagris_gallopavo
ENSRNOG00000059097	AABR07025140.1	99	81.182	ENSMAUG00000016664	Ddx60	80	81.182	Mesocricetus_auratus
ENSRNOG00000059097	AABR07025140.1	99	69.489	ENSMICG00000013542	DDX60	80	69.489	Microcebus_murinus
ENSRNOG00000059097	AABR07025140.1	99	77.850	ENSMOCG00000007646	-	80	77.996	Microtus_ochrogaster
ENSRNOG00000059097	AABR07025140.1	99	75.436	ENSMOCG00000008571	-	80	75.436	Microtus_ochrogaster
ENSRNOG00000059097	AABR07025140.1	100	59.405	ENSMODG00000002645	DDX60	80	59.405	Monodelphis_domestica
ENSRNOG00000059097	AABR07025140.1	99	86.340	MGP_CAROLIEiJ_G0031080	Ddx60	80	86.340	Mus_caroli
ENSRNOG00000059097	AABR07025140.1	99	85.829	ENSMUSG00000037921	Ddx60	80	85.829	Mus_musculus
ENSRNOG00000059097	AABR07025140.1	99	73.818	ENSMPUG00000007710	DDX60	80	73.818	Mustela_putorius_furo
ENSRNOG00000059097	AABR07025140.1	99	72.210	ENSMLUG00000007300	DDX60	80	72.210	Myotis_lucifugus
ENSRNOG00000059097	AABR07025140.1	99	72.210	ENSNLEG00000006542	DDX60	80	72.210	Nomascus_leucogenys
ENSRNOG00000059097	AABR07025140.1	89	56.667	ENSOANG00000007454	DDX60	79	56.992	Ornithorhynchus_anatinus
ENSRNOG00000059097	AABR07025140.1	86	48.701	ENSOANG00000028702	-	98	48.701	Ornithorhynchus_anatinus
ENSRNOG00000059097	AABR07025140.1	74	50.147	ENSOCUG00000022101	-	99	50.147	Oryctolagus_cuniculus
ENSRNOG00000059097	AABR07025140.1	99	72.973	ENSOCUG00000006355	DDX60	80	72.973	Oryctolagus_cuniculus
ENSRNOG00000059097	AABR07025140.1	99	48.345	ENSOCUG00000020913	-	81	48.281	Oryctolagus_cuniculus
ENSRNOG00000059097	AABR07025140.1	85	72.051	ENSPPAG00000040254	-	97	72.051	Pan_paniscus
ENSRNOG00000059097	AABR07025140.1	99	73.523	ENSPPRG00000009286	DDX60	80	73.523	Panthera_pardus
ENSRNOG00000059097	AABR07025140.1	99	73.523	ENSPTIG00000022042	DDX60	80	73.523	Panthera_tigris_altaica
ENSRNOG00000059097	AABR07025140.1	99	73.304	ENSPTRG00000016581	DDX60	80	73.304	Pan_troglodytes
ENSRNOG00000059097	AABR07025140.1	99	73.377	ENSPANG00000019535	DDX60	80	73.377	Papio_anubis
ENSRNOG00000059097	AABR07025140.1	99	57.556	ENSPSIG00000004307	DDX60	80	57.628	Pelodiscus_sinensis
ENSRNOG00000059097	AABR07025140.1	99	75.182	ENSPEMG00000023735	-	79	75.182	Peromyscus_maniculatus_bairdii
ENSRNOG00000059097	AABR07025140.1	99	70.225	ENSPPYG00000015184	DDX60	79	70.225	Pongo_abelii
ENSRNOG00000059097	AABR07025140.1	87	48.109	ENSPCAG00000000925	-	70	48.191	Procavia_capensis
ENSRNOG00000059097	AABR07025140.1	85	76.190	ENSPCAG00000002661	-	70	76.190	Procavia_capensis
ENSRNOG00000059097	AABR07025140.1	99	69.796	ENSPCOG00000008412	DDX60	82	70.306	Propithecus_coquereli
ENSRNOG00000059097	AABR07025140.1	99	69.158	ENSPVAG00000011428	DDX60	79	69.158	Pteropus_vampyrus
ENSRNOG00000059097	AABR07025140.1	93	76.012	ENSRBIG00000034414	DDX60	79	76.012	Rhinopithecus_bieti
ENSRNOG00000059097	AABR07025140.1	99	73.450	ENSRROG00000030767	DDX60	80	73.450	Rhinopithecus_roxellana
ENSRNOG00000059097	AABR07025140.1	99	69.971	ENSSBOG00000024856	DDX60	80	70.131	Saimiri_boliviensis_boliviensis
ENSRNOG00000059097	AABR07025140.1	100	61.002	ENSSHAG00000016219	DDX60	80	61.002	Sarcophilus_harrisii
ENSRNOG00000059097	AABR07025140.1	90	59.756	ENSSARG00000002474	-	74	59.756	Sorex_araneus
ENSRNOG00000059097	AABR07025140.1	74	73.418	ENSSPUG00000019257	DDX60	79	73.418	Sphenodon_punctatus
ENSRNOG00000059097	AABR07025140.1	99	71.606	ENSSSCG00000009720	DDX60	85	71.606	Sus_scrofa
ENSRNOG00000059097	AABR07025140.1	88	68.399	ENSTTRG00000016129	DDX60	70	68.399	Tursiops_truncatus
ENSRNOG00000059097	AABR07025140.1	99	72.820	ENSUMAG00000020219	DDX60	83	72.820	Ursus_maritimus
ENSRNOG00000059097	AABR07025140.1	99	72.023	ENSVVUG00000023953	DDX60	80	71.855	Vulpes_vulpes
ENSRNOG00000059097	AABR07025140.1	100	47.900	ENSXETG00000031597	-	80	47.900	Xenopus_tropicalis