EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000059133 (Gene tree)
Gene ID: -
Gene Symbol: AABR07020537.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5362 bases
Position: chr13:29839867-29845228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073322	RVT_1	PF00078.27	2.3e-54	1	1
ENSRNOP00000073322	Transposase_22	PF02994.14	2.8e-46	1	1
ENSRNOP00000073322	Exo_endo_phos	PF03372.23	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090623	AABR07020537.1-201	4983	-	ENSRNOP00000073322	1661 (aa)	-	A0A0G2K576

Gene Model

Click here to download ENSRNOG00000059133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000059133	AABR07020537.1	65	79.306	ENSRNOG00000060618	AABR07027267.1	74	80.985
ENSRNOG00000059133	AABR07020537.1	100	98.076	ENSRNOG00000059691	AABR07033318.1	97	98.076
ENSRNOG00000059133	AABR07020537.1	98	98.224	ENSRNOG00000060742	AABR07029809.1	100	98.224
ENSRNOG00000059133	AABR07020537.1	97	97.641	ENSRNOG00000056748	AC229945.1	100	97.641
ENSRNOG00000059133	AABR07020537.1	100	97.714	ENSRNOG00000054519	AABR07053179.1	97	97.714
ENSRNOG00000059133	AABR07020537.1	60	92.973	ENSRNOG00000034030	AC130162.1	75	92.973
ENSRNOG00000059133	AABR07020537.1	100	96.755	ENSRNOG00000056033	AC111632.2	99	96.755
ENSRNOG00000059133	AABR07020537.1	98	97.431	ENSRNOG00000058209	AABR07063893.1	100	97.431
ENSRNOG00000059133	AABR07020537.1	60	98.753	ENSRNOG00000057039	AC124874.1	92	98.753
ENSRNOG00000059133	AABR07020537.1	60	93.834	ENSRNOG00000058277	AC080157.1	73	98.864
ENSRNOG00000059133	AABR07020537.1	97	98.331	ENSRNOG00000047294	AABR07043115.1	100	98.331
ENSRNOG00000059133	AABR07020537.1	100	97.292	ENSRNOG00000049504	AABR07009221.1	97	97.292
ENSRNOG00000059133	AABR07020537.1	60	93.834	ENSRNOG00000045583	AABR07002068.1	73	98.864
ENSRNOG00000059133	AABR07020537.1	55	95.956	ENSRNOG00000005861	Hsd11b1	81	95.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059133	AABR07020537.1	69	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	51	65.452	ENSBTAG00000054826	-	98	65.452	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	71	63.342	ENSBTAG00000050847	-	92	63.342	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	51	64.906	ENSBTAG00000050251	-	99	64.906	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	53	65.193	ENSBTAG00000051121	-	99	65.193	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	61	64.012	ENSBTAG00000054392	-	97	64.012	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	52	65.541	ENSBTAG00000051999	-	99	65.541	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	71	63.432	ENSBTAG00000053316	-	92	63.432	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	56	65.696	ENSBTAG00000055052	-	99	65.696	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	71	63.342	ENSBTAG00000050912	-	92	63.342	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	63	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	67	63.252	ENSBTAG00000053324	-	93	63.252	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	62	63.863	ENSBTAG00000054175	-	91	63.863	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	62	64.278	ENSBTAG00000050534	-	91	64.278	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	71	63.522	ENSBTAG00000049649	-	92	63.522	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	51	67.092	ENSBTAG00000052305	-	89	67.092	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	65	64.012	ENSBTAG00000049055	-	92	64.012	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	71	63.252	ENSBTAG00000051842	-	92	63.465	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	53	65.840	ENSBTAG00000049728	-	99	65.840	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	71	63.252	ENSBTAG00000050965	-	92	63.252	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	67	63.522	ENSBTAG00000051208	-	92	63.522	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	51	65.452	ENSBTAG00000051119	-	98	65.452	Bos_taurus
ENSRNOG00000059133	AABR07020537.1	52	66.459	ENSCHIG00000008599	-	90	66.459	Capra_hircus
ENSRNOG00000059133	AABR07020537.1	54	66.347	ENSCHIG00000008419	-	90	66.347	Capra_hircus
ENSRNOG00000059133	AABR07020537.1	71	75.314	ENSCGRG00000018654	-	92	75.314	Cricetulus_griseus_crigri
ENSRNOG00000059133	AABR07020537.1	66	75.629	ENSCGRG00000019462	-	92	75.629	Cricetulus_griseus_crigri
ENSRNOG00000059133	AABR07020537.1	71	75.314	ENSCGRG00000019173	-	92	75.314	Cricetulus_griseus_crigri
ENSRNOG00000059133	AABR07020537.1	71	75.314	ENSCGRG00000019476	-	92	75.314	Cricetulus_griseus_crigri
ENSRNOG00000059133	AABR07020537.1	67	75.314	ENSCGRG00000018650	-	89	75.314	Cricetulus_griseus_crigri
ENSRNOG00000059133	AABR07020537.1	63	64.706	ENSOCUG00000029721	-	91	64.706	Oryctolagus_cuniculus
ENSRNOG00000059133	AABR07020537.1	63	62.775	ENSOCUG00000029631	-	99	62.775	Oryctolagus_cuniculus
ENSRNOG00000059133	AABR07020537.1	50	67.232	ENSOARG00000006683	-	88	67.232	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	56	63.509	ENSOARG00000011096	-	84	63.509	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	64	63.861	ENSOARG00000008210	-	89	63.861	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	71	63.432	ENSOARG00000001175	-	92	63.645	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	65	63.913	ENSOARG00000005813	-	92	63.913	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	71	63.522	ENSOARG00000010889	-	92	63.734	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	71	63.432	ENSOARG00000000057	-	92	63.645	Ovis_aries
ENSRNOG00000059133	AABR07020537.1	67	63.636	ENSSSCG00000036442	-	95	63.636	Sus_scrofa
ENSRNOG00000059133	AABR07020537.1	53	64.779	ENSSSCG00000035697	-	91	64.779	Sus_scrofa
ENSRNOG00000059133	AABR07020537.1	70	65.574	ENSSSCG00000040939	-	92	65.574	Sus_scrofa
ENSRNOG00000059133	AABR07020537.1	71	63.816	ENSSSCG00000039414	-	92	63.849	Sus_scrofa
ENSRNOG00000059133	AABR07020537.1	52	66.625	ENSSSCG00000040911	-	88	66.625	Sus_scrofa
ENSRNOG00000059133	AABR07020537.1	50	65.496	ENSSSCG00000037083	-	99	65.496	Sus_scrofa