EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000059412 (Gene tree)
Gene ID
313450
Gene Symbol
Rnf113a1
Alias
LOC313450
Full Name
ring finger protein 113A1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
1132 bases
Position
chrX:123806918-123808049
Accession
1359693
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000074691zf-CCCHPF00642.249.9e-0911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000082045-1132XM_008773490ENSRNOP00000074691341 (aa)XP_008771712Q5PPN1
Gene Model
Click here to download ENSRNOG00000059412's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059412's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000059412Rnf113a1100100.000ENSRNOG00000034040LOC108348079100100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000059412Rnf113a19568.293ENSG00000139797RNF113B9968.293Homo_sapiens
ENSRNOG00000059412Rnf113a19987.719ENSG00000125352RNF113A9988.304Homo_sapiens
ENSRNOG00000059412Rnf113a19270.382ENSAPOG00000017510rnf113a9670.382Acanthochromis_polyacanthus
ENSRNOG00000059412Rnf113a19985.920ENSAMEG00000019845-9986.782Ailuropoda_melanoleuca
ENSRNOG00000059412Rnf113a19661.280ENSACIG00000007458rnf113a9961.890Amphilophus_citrinellus
ENSRNOG00000059412Rnf113a19270.701ENSAOCG00000003485rnf113a9670.701Amphiprion_ocellaris
ENSRNOG00000059412Rnf113a19270.701ENSAPEG00000001084rnf113a9670.701Amphiprion_percula
ENSRNOG00000059412Rnf113a19469.375ENSATEG00000022950rnf113a9768.750Anabas_testudineus
ENSRNOG00000059412Rnf113a17981.550ENSAPLG00000012510-10081.550Anas_platyrhynchos
ENSRNOG00000059412Rnf113a18780.000ENSACAG00000012485-9480.333Anolis_carolinensis
ENSRNOG00000059412Rnf113a19288.328ENSANAG00000024332-9588.959Aotus_nancymaae
ENSRNOG00000059412Rnf113a19986.257ENSANAG00000013925-9985.673Aotus_nancymaae
ENSRNOG00000059412Rnf113a19468.519ENSANAG00000020431RNF113B9868.519Aotus_nancymaae
ENSRNOG00000059412Rnf113a19668.902ENSACLG00000025256rnf113a9968.598Astatotilapia_calliptera
ENSRNOG00000059412Rnf113a19568.210ENSAMXG00000011273rnf113a9968.210Astyanax_mexicanus
ENSRNOG00000059412Rnf113a19987.719ENSBTAG00000006034RNF113A9988.012Bos_taurus
ENSRNOG00000059412Rnf113a19979.143ENSBTAG00000008684-10079.487Bos_taurus
ENSRNOG00000059412Rnf113a18744.554WBGene00010476rnf-1138342.857Caenorhabditis_elegans
ENSRNOG00000059412Rnf113a19071.753ENSCJAG00000004501RNF113B9372.168Callithrix_jacchus
ENSRNOG00000059412Rnf113a19986.257ENSCJAG00000022327RNF113A9986.842Callithrix_jacchus
ENSRNOG00000059412Rnf113a19988.184ENSCAFG00000018430-9988.473Canis_familiaris
ENSRNOG00000059412Rnf113a19972.414ENSCAFG00000018373-10074.286Canis_familiaris
ENSRNOG00000059412Rnf113a19988.184ENSCAFG00020004044-9988.473Canis_lupus_dingo
ENSRNOG00000059412Rnf113a19972.701ENSCAFG00020020280-10074.571Canis_lupus_dingo
ENSRNOG00000059412Rnf113a19988.304ENSCHIG00000018820-9988.596Capra_hircus
ENSRNOG00000059412Rnf113a19980.352ENSCHIG00000015616-9980.645Capra_hircus
ENSRNOG00000059412Rnf113a19988.047ENSTSYG00000001308RNF113A9988.921Carlito_syrichta
ENSRNOG00000059412Rnf113a19887.688ENSCPOG00000038517-9987.688Cavia_porcellus
ENSRNOG00000059412Rnf113a19986.550ENSCCAG00000013617RNF113A9987.135Cebus_capucinus
ENSRNOG00000059412Rnf113a19370.625ENSCCAG00000021327RNF113B9771.028Cebus_capucinus
ENSRNOG00000059412Rnf113a19987.755ENSCATG00000002702RNF113A9988.338Cercocebus_atys
ENSRNOG00000059412Rnf113a19987.791ENSCLAG00000017479-9987.791Chinchilla_lanigera
ENSRNOG00000059412Rnf113a19966.472ENSCSAG00000000222RNF113B9966.860Chlorocebus_sabaeus
ENSRNOG00000059412Rnf113a19974.194ENSCSAG00000019472-10074.344Chlorocebus_sabaeus
ENSRNOG00000059412Rnf113a17886.466ENSCHOG00000008711-10086.466Choloepus_hoffmanni
ENSRNOG00000059412Rnf113a19479.751ENSCPBG00000026980-9879.439Chrysemys_picta_bellii
ENSRNOG00000059412Rnf113a18264.184ENSCING00000009197-9561.709Ciona_intestinalis
ENSRNOG00000059412Rnf113a18264.539ENSCSAVG00000006210-9363.072Ciona_savignyi
ENSRNOG00000059412Rnf113a19567.492ENSCANG00000041552RNF113B9967.183Colobus_angolensis_palliatus
ENSRNOG00000059412Rnf113a19988.304ENSCANG00000037715RNF113A9988.889Colobus_angolensis_palliatus
ENSRNOG00000059412Rnf113a110093.860ENSCGRG00001002251Rnf113a110093.860Cricetulus_griseus_chok1gshd
ENSRNOG00000059412Rnf113a19886.012ENSCGRG00000016675Rnf113a29986.012Cricetulus_griseus_crigri
ENSRNOG00000059412Rnf113a110093.567ENSCGRG00000019441Rnf113a110093.567Cricetulus_griseus_crigri
ENSRNOG00000059412Rnf113a19667.781ENSCSEG00000021570rnf113a8567.173Cynoglossus_semilaevis
ENSRNOG00000059412Rnf113a19668.485ENSCVAG00000011305rnf113a9967.781Cyprinodon_variegatus
ENSRNOG00000059412Rnf113a19471.562ENSDARG00000037930rnf113a9771.250Danio_rerio
ENSRNOG00000059412Rnf113a19883.036ENSDORG00000027624Rnf113a29983.036Dipodomys_ordii
ENSRNOG00000059412Rnf113a18858.013FBgn0038772mdlc8757.692Drosophila_melanogaster
ENSRNOG00000059412Rnf113a19985.588ENSETEG00000018346-9985.588Echinops_telfairi
ENSRNOG00000059412Rnf113a18970.724ENSEBUG00000016079rnf113a9469.010Eptatretus_burgeri
ENSRNOG00000059412Rnf113a19985.714ENSEASG00005010538-9986.006Equus_asinus_asinus
ENSRNOG00000059412Rnf113a19988.047ENSECAG00000003934-9988.338Equus_caballus
ENSRNOG00000059412Rnf113a19386.916ENSECAG00000004638-10087.227Equus_caballus
ENSRNOG00000059412Rnf113a19668.293ENSELUG00000020657rnf113a9968.293Esox_lucius
ENSRNOG00000059412Rnf113a19988.889ENSFCAG00000024392-9788.889Felis_catus
ENSRNOG00000059412Rnf113a19989.474ENSFCAG00000025700-9989.474Felis_catus
ENSRNOG00000059412Rnf113a19982.267ENSFCAG00000028962-9983.140Felis_catus
ENSRNOG00000059412Rnf113a18182.182ENSFALG00000004633-9280.783Ficedula_albicollis
ENSRNOG00000059412Rnf113a19469.279ENSFHEG00000023305rnf113a9769.279Fundulus_heteroclitus
ENSRNOG00000059412Rnf113a19068.454ENSGMOG00000004541rnf113a9468.454Gadus_morhua
ENSRNOG00000059412Rnf113a19476.380ENSGALG00000000538RNF113A9876.074Gallus_gallus
ENSRNOG00000059412Rnf113a19071.935ENSGAFG00000011863rnf113a9371.935Gambusia_affinis
ENSRNOG00000059412Rnf113a19366.358ENSGACG00000009738rnf113a9766.358Gasterosteus_aculeatus
ENSRNOG00000059412Rnf113a19479.439ENSGAGG00000020490-9879.128Gopherus_agassizii
ENSRNOG00000059412Rnf113a19987.719ENSGGOG00000002324RNF113A9988.304Gorilla_gorilla
ENSRNOG00000059412Rnf113a19568.598ENSGGOG00000023052RNF113B9968.598Gorilla_gorilla
ENSRNOG00000059412Rnf113a19669.207ENSHBUG00000008626rnf113a9968.902Haplochromis_burtoni
ENSRNOG00000059412Rnf113a19987.647ENSHGLG00000019571-9987.647Heterocephalus_glaber_female
ENSRNOG00000059412Rnf113a19985.549ENSHGLG00100019582-9986.127Heterocephalus_glaber_male
ENSRNOG00000059412Rnf113a19766.767ENSHCOG00000003421rnf113a9966.767Hippocampus_comes
ENSRNOG00000059412Rnf113a19270.794ENSIPUG00000013431RNF113A9670.794Ictalurus_punctatus
ENSRNOG00000059412Rnf113a19987.172ENSSTOG00000019866-9986.297Ictidomys_tridecemlineatus
ENSRNOG00000059412Rnf113a17763.636ENSJJAG00000019849Rnf113a18763.636Jaculus_jaculus
ENSRNOG00000059412Rnf113a19670.122ENSKMAG00000009830rnf113a9968.902Kryptolebias_marmoratus
ENSRNOG00000059412Rnf113a19668.598ENSLBEG00000004627rnf113a9968.598Labrus_bergylta
ENSRNOG00000059412Rnf113a19373.186ENSLACG00000013178rnf113a9673.186Latimeria_chalumnae
ENSRNOG00000059412Rnf113a19372.013ENSLOCG00000011785rnf113a9770.662Lepisosteus_oculatus
ENSRNOG00000059412Rnf113a110086.550ENSLAFG00000013906-10086.257Loxodonta_africana
ENSRNOG00000059412Rnf113a19987.755ENSMFAG00000018472RNF113A9988.338Macaca_fascicularis
ENSRNOG00000059412Rnf113a19987.755ENSMMUG00000020223RNF113A9988.338Macaca_mulatta
ENSRNOG00000059412Rnf113a19987.755ENSMNEG00000019778RNF113A9988.338Macaca_nemestrina
ENSRNOG00000059412Rnf113a17474.409ENSMLEG00000038757RNF113B8574.409Mandrillus_leucophaeus
ENSRNOG00000059412Rnf113a19987.755ENSMLEG00000020750RNF113A9988.338Mandrillus_leucophaeus
ENSRNOG00000059412Rnf113a19667.073ENSMAMG00000021895rnf113a9769.062Mastacembelus_armatus
ENSRNOG00000059412Rnf113a19668.902ENSMZEG00005023086rnf113a9968.598Maylandia_zebra
ENSRNOG00000059412Rnf113a18580.272ENSMGAG00000001753-9780.488Meleagris_gallopavo
ENSRNOG00000059412Rnf113a19585.538ENSMICG00000038084-9586.503Microcebus_murinus
ENSRNOG00000059412Rnf113a19987.500ENSMICG00000001750-9988.081Microcebus_murinus
ENSRNOG00000059412Rnf113a19994.643ENSMOCG00000005370-9694.643Microtus_ochrogaster
ENSRNOG00000059412Rnf113a19268.790ENSMMOG00000016954rnf113a9668.790Mola_mola
ENSRNOG00000059412Rnf113a19661.890ENSMALG00000007938rnf113a9961.890Monopterus_albus
ENSRNOG00000059412Rnf113a19786.527MGP_CAROLIEiJ_G0017943Rnf113a29986.012Mus_caroli
ENSRNOG00000059412Rnf113a19786.527ENSMUSG00000098134Rnf113a29986.012Mus_musculus
ENSRNOG00000059412Rnf113a110095.308ENSMUSG00000036537Rnf113a110095.308Mus_musculus
ENSRNOG00000059412Rnf113a110094.428MGP_PahariEiJ_G0031547Rnf113a110094.428Mus_pahari
ENSRNOG00000059412Rnf113a19886.310MGP_PahariEiJ_G0029702Rnf113a29986.310Mus_pahari
ENSRNOG00000059412Rnf113a110095.601MGP_SPRETEiJ_G0034156Rnf113a110095.601Mus_spretus
ENSRNOG00000059412Rnf113a19786.527MGP_SPRETEiJ_G0018788Rnf113a29986.012Mus_spretus
ENSRNOG00000059412Rnf113a19986.994ENSMPUG00000019358-9986.705Mustela_putorius_furo
ENSRNOG00000059412Rnf113a19983.285ENSMLUG00000016812-9983.285Myotis_lucifugus
ENSRNOG00000059412Rnf113a19683.234ENSMLUG00000010856-9783.234Myotis_lucifugus
ENSRNOG00000059412Rnf113a19668.902ENSNBRG00000004314rnf113a9968.598Neolamprologus_brichardi
ENSRNOG00000059412Rnf113a19987.135ENSNLEG00000018333RNF113A9987.719Nomascus_leucogenys
ENSRNOG00000059412Rnf113a19469.040ENSNLEG00000007844RNF113B9869.040Nomascus_leucogenys
ENSRNOG00000059412Rnf113a19676.647ENSMEUG00000001855-10077.545Notamacropus_eugenii
ENSRNOG00000059412Rnf113a19669.207ENSONIG00000000741rnf113a9968.902Oreochromis_niloticus
ENSRNOG00000059412Rnf113a19675.915ENSOANG00000002592-9675.915Ornithorhynchus_anatinus
ENSRNOG00000059412Rnf113a19986.880ENSOCUG00000016207-9988.047Oryctolagus_cuniculus
ENSRNOG00000059412Rnf113a19668.693ENSORLG00000002442rnf113a9968.693Oryzias_latipes
ENSRNOG00000059412Rnf113a19668.389ENSORLG00020011512rnf113a9968.389Oryzias_latipes_hni
ENSRNOG00000059412Rnf113a19668.693ENSORLG00015004382rnf113a9968.693Oryzias_latipes_hsok
ENSRNOG00000059412Rnf113a19470.717ENSOMEG00000020197rnf113a9770.093Oryzias_melastigma
ENSRNOG00000059412Rnf113a19984.751ENSOGAG00000011638RNF113B9983.871Otolemur_garnettii
ENSRNOG00000059412Rnf113a19986.880ENSOGAG00000031602RNF113A9986.880Otolemur_garnettii
ENSRNOG00000059412Rnf113a19988.304ENSOARG00000009771-9988.596Ovis_aries
ENSRNOG00000059412Rnf113a19979.769ENSOARG00000015294-10078.963Ovis_aries
ENSRNOG00000059412Rnf113a19987.719ENSPPAG00000009537RNF113A9988.304Pan_paniscus
ENSRNOG00000059412Rnf113a19569.207ENSPPAG00000040641RNF113B9969.207Pan_paniscus
ENSRNOG00000059412Rnf113a19989.474ENSPPRG00000011512-9989.474Panthera_pardus
ENSRNOG00000059412Rnf113a19982.216ENSPPRG00000020640-9983.382Panthera_pardus
ENSRNOG00000059412Rnf113a19989.474ENSPTIG00000007986-9989.474Panthera_tigris_altaica
ENSRNOG00000059412Rnf113a19569.207ENSPTRG00000005987RNF113B9969.207Pan_troglodytes
ENSRNOG00000059412Rnf113a19987.719ENSPTRG00000022231RNF113A9988.304Pan_troglodytes
ENSRNOG00000059412Rnf113a19987.755ENSPANG00000011522RNF113A9988.338Papio_anubis
ENSRNOG00000059412Rnf113a19270.476ENSPKIG00000016796rnf113a9969.909Paramormyrops_kingsleyae
ENSRNOG00000059412Rnf113a18682.534ENSPSIG00000012676-9782.332Pelodiscus_sinensis
ENSRNOG00000059412Rnf113a19071.661ENSPMGG00000009668rnf113a9371.661Periophthalmus_magnuspinnatus
ENSRNOG00000059412Rnf113a110095.335ENSPEMG00000002490Rnf113a110095.335Peromyscus_maniculatus_bairdii
ENSRNOG00000059412Rnf113a18669.625ENSPMAG00000005184rnf113a9570.280Petromyzon_marinus
ENSRNOG00000059412Rnf113a19877.168ENSPCIG00000028916-9976.879Phascolarctos_cinereus
ENSRNOG00000059412Rnf113a19071.753ENSPFOG00000014248rnf113a9371.935Poecilia_formosa
ENSRNOG00000059412Rnf113a19071.753ENSPLAG00000010435rnf113a9371.935Poecilia_latipinna
ENSRNOG00000059412Rnf113a19072.581ENSPMEG00000010641rnf113a9372.581Poecilia_mexicana
ENSRNOG00000059412Rnf113a19072.581ENSPREG00000009900rnf113a9372.581Poecilia_reticulata
ENSRNOG00000059412Rnf113a19570.031ENSPPYG00000005460RNF113B10070.427Pongo_abelii
ENSRNOG00000059412Rnf113a19987.135ENSPPYG00000020676RNF113A9987.719Pongo_abelii
ENSRNOG00000059412Rnf113a19986.176ENSPCAG00000014633-9986.176Procavia_capensis
ENSRNOG00000059412Rnf113a19584.195ENSPCOG00000005671-9585.106Propithecus_coquereli
ENSRNOG00000059412Rnf113a19668.902ENSPNYG00000013863rnf113a9968.598Pundamilia_nyererei
ENSRNOG00000059412Rnf113a19569.136ENSPNAG00000017428rnf113a9969.136Pygocentrus_nattereri
ENSRNOG00000059412Rnf113a19568.098ENSRBIG00000036094RNF113B9968.502Rhinopithecus_bieti
ENSRNOG00000059412Rnf113a19988.304ENSRBIG00000017389RNF113A9988.596Rhinopithecus_bieti
ENSRNOG00000059412Rnf113a19988.304ENSRROG00000012149RNF113A9988.596Rhinopithecus_roxellana
ENSRNOG00000059412Rnf113a19568.098ENSRROG00000045661RNF113B9968.502Rhinopithecus_roxellana
ENSRNOG00000059412Rnf113a19469.659ENSSBOG00000029719RNF113B9870.588Saimiri_boliviensis_boliviensis
ENSRNOG00000059412Rnf113a19987.427ENSSBOG00000017704RNF113A9988.012Saimiri_boliviensis_boliviensis
ENSRNOG00000059412Rnf113a19975.000ENSSHAG00000008839-10075.852Sarcophilus_harrisii
ENSRNOG00000059412Rnf113a19667.988ENSSFOG00015016567rnf113a9967.378Scleropages_formosus
ENSRNOG00000059412Rnf113a19269.108ENSSMAG00000009235rnf113a9967.378Scophthalmus_maximus
ENSRNOG00000059412Rnf113a19668.293ENSSDUG00000022244rnf113a9968.293Seriola_dumerili
ENSRNOG00000059412Rnf113a19668.293ENSSLDG00000018582rnf113a9968.293Seriola_lalandi_dorsalis
ENSRNOG00000059412Rnf113a19986.257ENSSARG00000010436-9986.257Sorex_araneus
ENSRNOG00000059412Rnf113a19477.570ENSSPUG00000018786-8777.259Sphenodon_punctatus
ENSRNOG00000059412Rnf113a19668.293ENSSPAG00000013187rnf113a9968.293Stegastes_partitus
ENSRNOG00000059412Rnf113a19986.880ENSSSCG00000032973-9987.755Sus_scrofa
ENSRNOG00000059412Rnf113a19477.640ENSTGUG00000001947-9877.329Taeniopygia_guttata
ENSRNOG00000059412Rnf113a19169.579ENSTRUG00000011142rnf113a9470.323Takifugu_rubripes
ENSRNOG00000059412Rnf113a18969.805ENSTNIG00000014938rnf113a9369.805Tetraodon_nigroviridis
ENSRNOG00000059412Rnf113a19987.464ENSTBEG00000012687-9988.630Tupaia_belangeri
ENSRNOG00000059412Rnf113a19686.667ENSUAMG00000024564-9790.000Ursus_americanus
ENSRNOG00000059412Rnf113a19686.930ENSUMAG00000002167-9990.274Ursus_maritimus
ENSRNOG00000059412Rnf113a19083.333ENSVPAG00000004521-10083.333Vicugna_pacos
ENSRNOG00000059412Rnf113a17168.826ENSVVUG00000004522-8371.084Vulpes_vulpes
ENSRNOG00000059412Rnf113a19988.184ENSVVUG00000011662-9988.473Vulpes_vulpes
ENSRNOG00000059412Rnf113a19471.028ENSXETG00000002042rnf113a9970.031Xenopus_tropicalis
ENSRNOG00000059412Rnf113a19071.104ENSXCOG00000017542rnf113a9671.104Xiphophorus_couchianus
ENSRNOG00000059412Rnf113a19072.258ENSXMAG00000008169rnf113a9372.258Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0004842ubiquitin-protein transferase activity-ISOFunction
GO:0005684U2-type spliceosomal complex21873635.IBAComponent
GO:0016567protein ubiquitination-ISOProcess
GO:0018276isopeptide cross-linking via N6-glycyl-L-lysine-ISOProcess
GO:0034247snoRNA splicing21873635.IBAProcess
GO:0046872metal ion binding-IEAFunction
GO:0070100negative regulation of chemokine-mediated signaling pathway-ISOProcess

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