EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000059428 (Gene tree)
Gene ID: -
Gene Symbol: AABR07050484.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 2144 bases
Position: chr5:166870011-166872154
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000068744	Ribosomal_S5	PF00333.20	3.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000088299	AABR07050484.1-201	1136	-	ENSRNOP00000068744	79 (aa)	-	Q6P9V0

Gene Model

Click here to download ENSRNOG00000059428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000059428	AABR07050484.1	100	93.671	ENSRNOG00000022934	AABR07066818.1	55	92.537
ENSRNOG00000059428	AABR07050484.1	100	82.278	ENSRNOG00000002789	AABR07039648.1	53	82.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059428	AABR07050484.1	100	93.671	ENSG00000140988	RPS2	73	96.875	Homo_sapiens
ENSRNOG00000059428	AABR07050484.1	86	82.353	ENSBTAG00000053607	-	52	82.353	Bos_taurus
ENSRNOG00000059428	AABR07050484.1	91	80.556	ENSCAFG00020025811	-	56	80.556	Canis_lupus_dingo
ENSRNOG00000059428	AABR07050484.1	99	73.077	ENSTSYG00000031951	-	62	73.077	Carlito_syrichta
ENSRNOG00000059428	AABR07050484.1	100	88.608	ENSCPOG00000021511	-	52	85.915	Cavia_porcellus
ENSRNOG00000059428	AABR07050484.1	100	87.342	ENSCANG00000037678	-	51	83.333	Colobus_angolensis_palliatus
ENSRNOG00000059428	AABR07050484.1	89	78.571	ENSFCAG00000043322	-	58	78.571	Felis_catus
ENSRNOG00000059428	AABR07050484.1	89	90.000	ENSJJAG00000010576	-	57	90.000	Jaculus_jaculus
ENSRNOG00000059428	AABR07050484.1	100	87.342	ENSJJAG00000021614	-	55	87.342	Jaculus_jaculus
ENSRNOG00000059428	AABR07050484.1	86	85.294	ENSMMUG00000015102	-	52	81.944	Macaca_mulatta
ENSRNOG00000059428	AABR07050484.1	100	92.405	ENSMNEG00000041669	-	74	85.333	Macaca_nemestrina
ENSRNOG00000059428	AABR07050484.1	100	82.278	ENSMLEG00000029614	-	63	89.041	Mandrillus_leucophaeus
ENSRNOG00000059428	AABR07050484.1	100	89.873	MGP_PahariEiJ_G0019322	-	51	89.873	Mus_pahari
ENSRNOG00000059428	AABR07050484.1	94	83.784	ENSNLEG00000031557	-	55	83.333	Nomascus_leucogenys
ENSRNOG00000059428	AABR07050484.1	100	93.671	ENSNLEG00000026553	-	54	79.747	Nomascus_leucogenys
ENSRNOG00000059428	AABR07050484.1	85	85.075	ENSODEG00000011294	-	57	85.075	Octodon_degus
ENSRNOG00000059428	AABR07050484.1	85	86.567	ENSODEG00000014327	-	54	86.567	Octodon_degus
ENSRNOG00000059428	AABR07050484.1	100	87.342	ENSPEMG00000021580	-	50	87.342	Peromyscus_maniculatus_bairdii
ENSRNOG00000059428	AABR07050484.1	100	82.927	ENSPEMG00000009317	-	63	82.927	Peromyscus_maniculatus_bairdii
ENSRNOG00000059428	AABR07050484.1	100	77.215	ENSUMAG00000025535	-	59	77.215	Ursus_maritimus