EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000059485 (Gene tree)
Gene ID: 60396
Gene Symbol: Cdkl3
Alias: LOC103694901
Full Name: cyclin-dependent kinase-like 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 35040 bases
Position: chr10:37458452-37493491
Accession: 619874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000072310	RIO1	PF01163.22	0.00021	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079411	-	2833	XM_006246323	ENSRNOP00000072310	595 (aa)	XP_006246385	A0A0G2K2N2

Gene Model

Click here to download ENSRNOG00000059485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000059485	Cdkl3	97	100.000	ENSRNOG00000054806	LOC108348323	99	98.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059485	Cdkl3	77	90.810	ENSCGRG00001024159	Cdkl3	92	98.639	Cricetulus_griseus_chok1gshd
ENSRNOG00000059485	Cdkl3	100	90.588	ENSCGRG00000008921	Cdkl3	100	98.958	Cricetulus_griseus_crigri
ENSRNOG00000059485	Cdkl3	99	80.912	ENSFCAG00000024742	CDKL3	100	81.419	Felis_catus
ENSRNOG00000059485	Cdkl3	100	83.250	ENSLAFG00000011468	CDKL3	100	83.250	Loxodonta_africana
ENSRNOG00000059485	Cdkl3	91	82.873	ENSMICG00000004579	CDKL3	96	82.873	Microcebus_murinus
ENSRNOG00000059485	Cdkl3	100	94.958	MGP_CAROLIEiJ_G0016322	Cdkl3	100	99.479	Mus_caroli
ENSRNOG00000059485	Cdkl3	100	95.126	ENSMUSG00000020389	Cdkl3	100	99.479	Mus_musculus
ENSRNOG00000059485	Cdkl3	100	95.462	MGP_PahariEiJ_G0017457	Cdkl3	100	99.479	Mus_pahari
ENSRNOG00000059485	Cdkl3	100	94.958	MGP_SPRETEiJ_G0017166	Cdkl3	100	99.479	Mus_spretus
ENSRNOG00000059485	Cdkl3	99	83.361	ENSMPUG00000010119	CDKL3	99	83.361	Mustela_putorius_furo
ENSRNOG00000059485	Cdkl3	99	79.764	ENSMLUG00000012902	CDKL3	99	79.764	Myotis_lucifugus
ENSRNOG00000059485	Cdkl3	83	71.774	ENSOANG00000000233	CDKL3	100	73.185	Ornithorhynchus_anatinus
ENSRNOG00000059485	Cdkl3	99	82.432	ENSPPRG00000005837	CDKL3	99	85.872	Panthera_pardus
ENSRNOG00000059485	Cdkl3	99	82.264	ENSPTIG00000019406	CDKL3	99	84.507	Panthera_tigris_altaica
ENSRNOG00000059485	Cdkl3	99	79.258	ENSPVAG00000012429	CDKL3	99	79.258	Pteropus_vampyrus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004693	cyclin-dependent protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	20347982.	IDA	Component
GO:0005737	cytoplasm	20347982.	IDA	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0030517	negative regulation of axon extension	21873635.	IBA	Process
GO:0030517	negative regulation of axon extension	20347982.	IMP	Process
GO:0030517	negative regulation of axon extension	-	ISO	Process
GO:0050775	positive regulation of dendrite morphogenesis	21873635.	IBA	Process
GO:0050775	positive regulation of dendrite morphogenesis	20347982.	IMP	Process
GO:0050775	positive regulation of dendrite morphogenesis	-	ISO	Process
GO:0051726	regulation of cell cycle	-	IEA	Process
GO:0097484	dendrite extension	21873635.	IBA	Process
GO:0097484	dendrite extension	20347982.	IMP	Process
GO:0097484	dendrite extension	-	ISO	Process