EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000059551 (Gene tree)
Gene ID: 499027
Gene Symbol: RGD1560718
Alias: LOC499027
Full Name: similar to putative protein kinase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 1895 bases
Position: chr1:54034174-54036068
Accession: 1560718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000067725	RIO1	PF01163.22	9.1e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075019	-	1895	XM_008758795	ENSRNOP00000067725	501 (aa)	XP_008757017	M0RDM0

Gene Model

Click here to download ENSRNOG00000059551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000059551	RGD1560718	100	93.812	ENSRNOG00000052093	Smok2a	100	93.812
ENSRNOG00000059551	RGD1560718	52	33.086	ENSRNOG00000004362	Rps6ka5	65	33.086
ENSRNOG00000059551	RGD1560718	98	42.394	ENSRNOG00000025799	RGD1560303	99	41.815
ENSRNOG00000059551	RGD1560718	50	30.741	ENSRNOG00000017332	Dapk2	72	30.741
ENSRNOG00000059551	RGD1560718	56	37.544	ENSRNOG00000028913	AABR07028872.1	90	37.544
ENSRNOG00000059551	RGD1560718	52	39.163	ENSRNOG00000051596	AABR07056131.1	95	39.163
ENSRNOG00000059551	RGD1560718	96	50.000	ENSRNOG00000030145	RGD1561667	96	50.204
ENSRNOG00000059551	RGD1560718	52	39.924	ENSRNOG00000048230	AABR07056118.1	95	39.924
ENSRNOG00000059551	RGD1560718	100	73.016	ENSRNOG00000024200	LOC690235	100	73.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059551	RGD1560718	55	42.606	ENSBTAG00000052622	-	89	42.606	Bos_taurus
ENSRNOG00000059551	RGD1560718	65	39.458	ENSCPOG00000033321	-	54	39.458	Cavia_porcellus
ENSRNOG00000059551	RGD1560718	63	40.062	ENSCPOG00000034310	-	97	40.062	Cavia_porcellus
ENSRNOG00000059551	RGD1560718	58	41.638	ENSCING00000008201	-	88	41.638	Ciona_intestinalis
ENSRNOG00000059551	RGD1560718	97	54.098	ENSCGRG00001007918	-	98	53.893	Cricetulus_griseus_chok1gshd
ENSRNOG00000059551	RGD1560718	94	43.852	ENSCGRG00001006023	Gm4922	94	43.852	Cricetulus_griseus_chok1gshd
ENSRNOG00000059551	RGD1560718	96	54.620	ENSCGRG00001010553	-	96	54.339	Cricetulus_griseus_chok1gshd
ENSRNOG00000059551	RGD1560718	94	43.852	ENSCGRG00000009530	Gm4922	94	43.852	Cricetulus_griseus_crigri
ENSRNOG00000059551	RGD1560718	96	34.623	ENSFDAG00000016208	-	98	34.420	Fukomys_damarensis
ENSRNOG00000059551	RGD1560718	96	53.099	MGP_CAROLIEiJ_G0021081	-	99	53.099	Mus_caroli
ENSRNOG00000059551	RGD1560718	96	53.099	MGP_CAROLIEiJ_G0021080	-	99	53.099	Mus_caroli
ENSRNOG00000059551	RGD1560718	96	53.099	MGP_CAROLIEiJ_G0021082	-	99	53.099	Mus_caroli
ENSRNOG00000059551	RGD1560718	96	53.099	MGP_CAROLIEiJ_G0021079	-	99	53.099	Mus_caroli
ENSRNOG00000059551	RGD1560718	93	41.736	MGP_CAROLIEiJ_G0015144	Gm4922	93	41.736	Mus_caroli
ENSRNOG00000059551	RGD1560718	57	37.847	ENSMUSG00000109516	Gm6882	92	37.847	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	40.154	ENSMUSG00000094682	Gm6902	86	40.154	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	40.154	ENSMUSG00000095363	Gm4567	86	40.154	Mus_musculus
ENSRNOG00000059551	RGD1560718	95	51.134	ENSMUSG00000101361	Gm7356	95	50.719	Mus_musculus
ENSRNOG00000059551	RGD1560718	96	52.066	ENSMUSG00000073457	Smok2b	99	52.066	Mus_musculus
ENSRNOG00000059551	RGD1560718	100	52.079	ENSMUSG00000073458	Smok2a	100	52.079	Mus_musculus
ENSRNOG00000059551	RGD1560718	57	37.847	ENSMUSG00000095976	Gm5891	92	37.847	Mus_musculus
ENSRNOG00000059551	RGD1560718	99	51.697	ENSMUSG00000075599	Smok3a	99	51.697	Mus_musculus
ENSRNOG00000059551	RGD1560718	99	50.898	ENSMUSG00000075598	Smok3c	99	50.898	Mus_musculus
ENSRNOG00000059551	RGD1560718	99	51.697	ENSMUSG00000079156	Smok3b	99	51.697	Mus_musculus
ENSRNOG00000059551	RGD1560718	95	51.134	ENSMUSG00000101307	Gm7358	95	50.719	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	40.541	ENSMUSG00000109060	Gm4513	88	39.850	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	40.541	ENSMUSG00000109396	Gm4565	88	39.850	Mus_musculus
ENSRNOG00000059551	RGD1560718	95	49.691	ENSMUSG00000067941	Gm7168	95	49.485	Mus_musculus
ENSRNOG00000059551	RGD1560718	57	37.847	ENSMUSG00000095683	Gm10662	92	37.847	Mus_musculus
ENSRNOG00000059551	RGD1560718	100	40.499	ENSMUSG00000044624	Gm4922	100	40.499	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	40.154	ENSMUSG00000095190	Gm10668	86	40.154	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	39.382	ENSMUSG00000101436	Gm5157	88	38.722	Mus_musculus
ENSRNOG00000059551	RGD1560718	52	39.768	ENSMUSG00000096283	Gm6176	86	39.768	Mus_musculus
ENSRNOG00000059551	RGD1560718	96	41.344	MGP_PahariEiJ_G0023763	Gm4922	100	41.016	Mus_pahari
ENSRNOG00000059551	RGD1560718	100	41.233	MGP_SPRETEiJ_G0015952	Gm4922	100	41.233	Mus_spretus
ENSRNOG00000059551	RGD1560718	96	50.206	ENSNGAG00000008026	-	96	49.184	Nannospalax_galili
ENSRNOG00000059551	RGD1560718	50	42.169	ENSOGAG00000033945	-	94	41.860	Otolemur_garnettii
ENSRNOG00000059551	RGD1560718	96	53.498	ENSPEMG00000022024	-	90	59.437	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process