EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000059572 (Gene tree)
Gene ID: 100909510
Gene Symbol: Tsen34l1
Alias: LENG5|LOC100909510|MGC94712|SEN34
Full Name: tRNA splicing endonuclease subunit 34-like 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 7052 bases
Position: chr1:64092226-64099277
Accession: 6503363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071330	tRNA_int_endo	PF01974.17	4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000084846	-	1344	XM_003748716	ENSRNOP00000071330	312 (aa)	XP_003748764	Q5XIB7

Gene Model

Click here to download ENSRNOG00000059572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000059572	Tsen34l1	100	100.000	ENSRNOG00000055179	Tsen34	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059572	Tsen34l1	100	89.103	ENSG00000170892	TSEN34	100	89.103	Homo_sapiens
ENSRNOG00000059572	Tsen34l1	99	38.585	ENSAPOG00000001248	tsen34	93	38.585	Acanthochromis_polyacanthus
ENSRNOG00000059572	Tsen34l1	94	37.627	ENSAPOG00000008579	-	93	37.627	Acanthochromis_polyacanthus
ENSRNOG00000059572	Tsen34l1	94	36.271	ENSAPOG00000012557	-	86	36.271	Acanthochromis_polyacanthus
ENSRNOG00000059572	Tsen34l1	92	88.112	ENSAMEG00000004585	TSEN34	100	88.112	Ailuropoda_melanoleuca
ENSRNOG00000059572	Tsen34l1	99	38.750	ENSACIG00000007110	tsen34	87	38.750	Amphilophus_citrinellus
ENSRNOG00000059572	Tsen34l1	99	39.355	ENSAOCG00000006905	tsen34	93	39.355	Amphiprion_ocellaris
ENSRNOG00000059572	Tsen34l1	99	39.677	ENSAPEG00000019171	tsen34	93	39.677	Amphiprion_percula
ENSRNOG00000059572	Tsen34l1	99	37.658	ENSATEG00000019800	tsen34	97	38.562	Anabas_testudineus
ENSRNOG00000059572	Tsen34l1	100	45.541	ENSACAG00000016189	TSEN34	100	45.541	Anolis_carolinensis
ENSRNOG00000059572	Tsen34l1	100	90.064	ENSANAG00000026113	TSEN34	100	90.064	Aotus_nancymaae
ENSRNOG00000059572	Tsen34l1	99	39.103	ENSAMXG00000017568	tsen34	86	39.103	Astyanax_mexicanus
ENSRNOG00000059572	Tsen34l1	100	88.818	ENSBTAG00000006486	TSEN34	100	88.818	Bos_taurus
ENSRNOG00000059572	Tsen34l1	100	86.218	ENSCJAG00000001128	TSEN34	99	88.294	Callithrix_jacchus
ENSRNOG00000059572	Tsen34l1	100	85.897	ENSCAFG00000002675	TSEN34	100	85.897	Canis_familiaris
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSCAFG00020018350	TSEN34	100	88.462	Canis_lupus_dingo
ENSRNOG00000059572	Tsen34l1	100	85.577	ENSCHIG00000020705	TSEN34	100	85.577	Capra_hircus
ENSRNOG00000059572	Tsen34l1	98	86.275	ENSTSYG00000028200	TSEN34	98	86.275	Carlito_syrichta
ENSRNOG00000059572	Tsen34l1	66	77.143	ENSCAPG00000012811	-	99	77.143	Cavia_aperea
ENSRNOG00000059572	Tsen34l1	99	82.075	ENSCPOG00000012672	TSEN34	99	82.075	Cavia_porcellus
ENSRNOG00000059572	Tsen34l1	100	89.744	ENSCCAG00000036023	TSEN34	100	89.744	Cebus_capucinus
ENSRNOG00000059572	Tsen34l1	96	86.957	ENSCATG00000033390	TSEN34	94	86.957	Cercocebus_atys
ENSRNOG00000059572	Tsen34l1	100	85.897	ENSCLAG00000000618	TSEN34	100	85.897	Chinchilla_lanigera
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSCSAG00000001891	TSEN34	100	88.462	Chlorocebus_sabaeus
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSCANG00000040984	TSEN34	100	88.462	Colobus_angolensis_palliatus
ENSRNOG00000059572	Tsen34l1	100	94.304	ENSCGRG00001006296	Tsen34	100	94.304	Cricetulus_griseus_chok1gshd
ENSRNOG00000059572	Tsen34l1	72	85.714	ENSCGRG00000008494	Tsen34	100	88.235	Cricetulus_griseus_crigri
ENSRNOG00000059572	Tsen34l1	96	38.742	ENSCSEG00000006278	tsen34	86	38.742	Cynoglossus_semilaevis
ENSRNOG00000059572	Tsen34l1	99	37.342	ENSDARG00000061370	tsen34	89	37.658	Danio_rerio
ENSRNOG00000059572	Tsen34l1	100	86.859	ENSDNOG00000039332	TSEN34	100	86.538	Dasypus_novemcinctus
ENSRNOG00000059572	Tsen34l1	100	86.538	ENSDORG00000029071	Tsen34	100	86.538	Dipodomys_ordii
ENSRNOG00000059572	Tsen34l1	100	88.141	ENSEASG00005021580	TSEN34	100	88.141	Equus_asinus_asinus
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSECAG00000019651	TSEN34	86	88.462	Equus_caballus
ENSRNOG00000059572	Tsen34l1	60	83.511	ENSEEUG00000005692	TSEN34	66	83.511	Erinaceus_europaeus
ENSRNOG00000059572	Tsen34l1	99	37.736	ENSELUG00000006262	tsen34	92	37.736	Esox_lucius
ENSRNOG00000059572	Tsen34l1	100	87.821	ENSFCAG00000014045	TSEN34	100	87.821	Felis_catus
ENSRNOG00000059572	Tsen34l1	84	81.749	ENSFDAG00000017995	TSEN34	98	83.268	Fukomys_damarensis
ENSRNOG00000059572	Tsen34l1	99	39.677	ENSGAFG00000016880	tsen34	93	39.677	Gambusia_affinis
ENSRNOG00000059572	Tsen34l1	99	38.438	ENSGACG00000004800	tsen34	99	38.438	Gasterosteus_aculeatus
ENSRNOG00000059572	Tsen34l1	100	46.541	ENSGAGG00000008982	TSEN34	73	46.541	Gopherus_agassizii
ENSRNOG00000059572	Tsen34l1	100	89.103	ENSGGOG00000008197	TSEN34	100	89.103	Gorilla_gorilla
ENSRNOG00000059572	Tsen34l1	100	85.714	ENSHGLG00000017619	TSEN34	100	85.714	Heterocephalus_glaber_female
ENSRNOG00000059572	Tsen34l1	100	67.937	ENSHGLG00100008719	TSEN34	100	69.401	Heterocephalus_glaber_male
ENSRNOG00000059572	Tsen34l1	96	38.614	ENSHCOG00000001368	tsen34	92	38.614	Hippocampus_comes
ENSRNOG00000059572	Tsen34l1	96	37.621	ENSIPUG00000008359	tsen34	85	37.621	Ictalurus_punctatus
ENSRNOG00000059572	Tsen34l1	100	87.179	ENSSTOG00000023816	TSEN34	100	87.179	Ictidomys_tridecemlineatus
ENSRNOG00000059572	Tsen34l1	100	90.823	ENSJJAG00000016301	Tsen34	100	90.823	Jaculus_jaculus
ENSRNOG00000059572	Tsen34l1	99	39.241	ENSKMAG00000007181	tsen34	82	40.523	Kryptolebias_marmoratus
ENSRNOG00000059572	Tsen34l1	99	40.127	ENSLBEG00000015001	tsen34	94	40.127	Labrus_bergylta
ENSRNOG00000059572	Tsen34l1	74	43.515	ENSLACG00000013346	-	99	44.351	Latimeria_chalumnae
ENSRNOG00000059572	Tsen34l1	99	39.677	ENSLOCG00000001887	tsen34	97	39.677	Lepisosteus_oculatus
ENSRNOG00000059572	Tsen34l1	100	86.792	ENSLAFG00000015215	TSEN34	100	86.792	Loxodonta_africana
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSMFAG00000044825	TSEN34	100	88.462	Macaca_fascicularis
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSMMUG00000016571	TSEN34	100	88.462	Macaca_mulatta
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSMNEG00000045457	TSEN34	100	88.462	Macaca_nemestrina
ENSRNOG00000059572	Tsen34l1	96	72.910	ENSMLEG00000034295	TSEN34	93	72.910	Mandrillus_leucophaeus
ENSRNOG00000059572	Tsen34l1	99	38.854	ENSMAMG00000018407	tsen34	95	38.462	Mastacembelus_armatus
ENSRNOG00000059572	Tsen34l1	81	94.488	ENSMAUG00000019716	Tsen34	81	94.488	Mesocricetus_auratus
ENSRNOG00000059572	Tsen34l1	100	91.026	ENSMICG00000002409	TSEN34	100	91.026	Microcebus_murinus
ENSRNOG00000059572	Tsen34l1	100	96.541	ENSMOCG00000022190	Tsen34	100	96.541	Microtus_ochrogaster
ENSRNOG00000059572	Tsen34l1	99	36.977	ENSMMOG00000009551	tsen34	99	35.691	Mola_mola
ENSRNOG00000059572	Tsen34l1	99	57.556	ENSMODG00000003984	-	76	60.772	Monodelphis_domestica
ENSRNOG00000059572	Tsen34l1	97	38.658	ENSMALG00000018918	tsen34	94	37.460	Monopterus_albus
ENSRNOG00000059572	Tsen34l1	100	99.038	MGP_CAROLIEiJ_G0029099	Tsen34	100	99.038	Mus_caroli
ENSRNOG00000059572	Tsen34l1	100	99.038	ENSMUSG00000035585	Tsen34	100	99.038	Mus_musculus
ENSRNOG00000059572	Tsen34l1	100	99.361	MGP_PahariEiJ_G0020968	Tsen34	100	99.361	Mus_pahari
ENSRNOG00000059572	Tsen34l1	100	99.359	MGP_SPRETEiJ_G0030152	Tsen34	100	99.359	Mus_spretus
ENSRNOG00000059572	Tsen34l1	100	87.179	ENSMPUG00000010373	TSEN34	100	89.103	Mustela_putorius_furo
ENSRNOG00000059572	Tsen34l1	100	86.943	ENSMLUG00000016894	TSEN34	100	86.943	Myotis_lucifugus
ENSRNOG00000059572	Tsen34l1	86	88.390	ENSNGAG00000016187	Tsen34	97	88.390	Nannospalax_galili
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSNLEG00000006309	TSEN34	100	88.462	Nomascus_leucogenys
ENSRNOG00000059572	Tsen34l1	99	61.415	ENSMEUG00000002978	TSEN34	99	61.415	Notamacropus_eugenii
ENSRNOG00000059572	Tsen34l1	100	79.439	ENSODEG00000000096	TSEN34	100	79.439	Octodon_degus
ENSRNOG00000059572	Tsen34l1	76	51.261	ENSOANG00000014747	-	99	52.720	Ornithorhynchus_anatinus
ENSRNOG00000059572	Tsen34l1	99	38.462	ENSORLG00015012740	tsen34	94	39.103	Oryzias_latipes_hsok
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSOGAG00000006966	TSEN34	100	88.462	Otolemur_garnettii
ENSRNOG00000059572	Tsen34l1	91	82.042	ENSOARG00000002763	TSEN34	95	82.042	Ovis_aries
ENSRNOG00000059572	Tsen34l1	100	88.782	ENSPPAG00000036935	TSEN34	100	88.782	Pan_paniscus
ENSRNOG00000059572	Tsen34l1	100	88.141	ENSPPRG00000011779	TSEN34	100	88.141	Panthera_pardus
ENSRNOG00000059572	Tsen34l1	100	89.103	ENSPTRG00000011448	TSEN34	100	89.103	Pan_troglodytes
ENSRNOG00000059572	Tsen34l1	100	89.103	ENSPTRG00000044768	-	100	89.103	Pan_troglodytes
ENSRNOG00000059572	Tsen34l1	100	88.782	ENSPANG00000012101	TSEN34	100	88.782	Papio_anubis
ENSRNOG00000059572	Tsen34l1	96	39.216	ENSPKIG00000014674	tsen34	90	39.216	Paramormyrops_kingsleyae
ENSRNOG00000059572	Tsen34l1	100	97.756	ENSPEMG00000014535	Tsen34	100	97.756	Peromyscus_maniculatus_bairdii
ENSRNOG00000059572	Tsen34l1	99	38.217	ENSPFOG00000008679	tsen34	93	40.000	Poecilia_formosa
ENSRNOG00000059572	Tsen34l1	99	38.907	ENSPLAG00000017309	tsen34	93	39.172	Poecilia_latipinna
ENSRNOG00000059572	Tsen34l1	99	38.217	ENSPMEG00000005235	tsen34	93	40.000	Poecilia_mexicana
ENSRNOG00000059572	Tsen34l1	99	38.978	ENSPREG00000021784	tsen34	93	38.978	Poecilia_reticulata
ENSRNOG00000059572	Tsen34l1	100	89.744	ENSPPYG00000010376	TSEN34	96	89.744	Pongo_abelii
ENSRNOG00000059572	Tsen34l1	99	88.103	ENSPCAG00000012359	TSEN34	100	88.424	Procavia_capensis
ENSRNOG00000059572	Tsen34l1	100	90.735	ENSPCOG00000013843	TSEN34	100	90.735	Propithecus_coquereli
ENSRNOG00000059572	Tsen34l1	100	83.654	ENSPVAG00000015570	TSEN34	100	83.654	Pteropus_vampyrus
ENSRNOG00000059572	Tsen34l1	99	36.677	ENSPNAG00000028698	tsen34	86	36.677	Pygocentrus_nattereri
ENSRNOG00000059572	Tsen34l1	100	89.103	ENSRBIG00000034430	TSEN34	100	89.103	Rhinopithecus_bieti
ENSRNOG00000059572	Tsen34l1	100	89.103	ENSRROG00000024217	TSEN34	100	89.103	Rhinopithecus_roxellana
ENSRNOG00000059572	Tsen34l1	96	89.632	ENSSBOG00000016017	TSEN34	97	89.597	Saimiri_boliviensis_boliviensis
ENSRNOG00000059572	Tsen34l1	70	58.257	ENSSHAG00000009295	-	99	58.716	Sarcophilus_harrisii
ENSRNOG00000059572	Tsen34l1	72	36.889	ENSSFOG00015017579	tsen34	80	36.889	Scleropages_formosus
ENSRNOG00000059572	Tsen34l1	96	40.594	ENSSMAG00000005214	tsen34	93	40.594	Scophthalmus_maximus
ENSRNOG00000059572	Tsen34l1	99	39.365	ENSSDUG00000005391	tsen34	91	39.365	Seriola_dumerili
ENSRNOG00000059572	Tsen34l1	99	39.683	ENSSLDG00000006144	tsen34	88	39.683	Seriola_lalandi_dorsalis
ENSRNOG00000059572	Tsen34l1	94	76.431	ENSSARG00000005857	TSEN34	79	76.431	Sorex_araneus
ENSRNOG00000059572	Tsen34l1	100	41.562	ENSSPUG00000008447	TSEN34	100	41.562	Sphenodon_punctatus
ENSRNOG00000059572	Tsen34l1	99	38.387	ENSSPAG00000010512	tsen34	92	38.065	Stegastes_partitus
ENSRNOG00000059572	Tsen34l1	100	87.821	ENSSSCG00000003268	TSEN34	100	87.821	Sus_scrofa
ENSRNOG00000059572	Tsen34l1	100	89.423	ENSTTRG00000006571	TSEN34	100	89.423	Tursiops_truncatus
ENSRNOG00000059572	Tsen34l1	100	88.141	ENSUAMG00000008701	TSEN34	100	89.423	Ursus_americanus
ENSRNOG00000059572	Tsen34l1	100	88.462	ENSVVUG00000008211	TSEN34	100	88.462	Vulpes_vulpes
ENSRNOG00000059572	Tsen34l1	100	42.320	ENSXETG00000004597	tsen34	100	41.456	Xenopus_tropicalis
ENSRNOG00000059572	Tsen34l1	99	39.032	ENSXMAG00000024266	tsen34	93	39.677	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000214	tRNA-intron endonuclease complex	-	IEA	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0016829	lyase activity	-	IEA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process