EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000059956 (Gene tree)
Gene ID: 360551
Gene Symbol: Bcl6b
Alias: LOC360551|RGD1563179
Full Name: B-cell CLL/lymphoma 6B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 5074 bases
Position: chr10:56834364-56839437
Accession: 1563179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071137	zf-C2H2	PF00096.26	3.4e-17	1	2
ENSRNOP00000071137	zf-C2H2	PF00096.26	3.4e-17	2	2
ENSRNOP00000071137	zf-met	PF12874.7	5.4e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090338	-	3346	XM_008767841	ENSRNOP00000071137	472 (aa)	XP_008766063	D3ZTN3

Gene Model

Click here to download ENSRNOG00000059956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000059956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000059956	Bcl6b	53	40.708	ENSRNOG00000056716	Zbtb20	65	37.838
ENSRNOG00000059956	Bcl6b	93	41.121	ENSRNOG00000016719	Zfp161	54	37.288
ENSRNOG00000059956	Bcl6b	94	50.355	ENSRNOG00000027923	Mynn	86	50.355
ENSRNOG00000059956	Bcl6b	51	32.407	ENSRNOG00000047699	Snai2	51	32.407
ENSRNOG00000059956	Bcl6b	75	42.857	ENSRNOG00000010436	Zbtb17	56	44.444
ENSRNOG00000059956	Bcl6b	54	42.958	ENSRNOG00000029980	Zbtb16	57	42.958
ENSRNOG00000059956	Bcl6b	93	30.108	ENSRNOG00000000308	Zbtb24	74	40.299

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000059956	Bcl6b	100	89.979	ENSG00000161940	BCL6B	100	98.496	Homo_sapiens
ENSRNOG00000059956	Bcl6b	98	45.047	ENSAPOG00000023214	bcl6b	78	55.725	Acanthochromis_polyacanthus
ENSRNOG00000059956	Bcl6b	100	89.727	ENSAMEG00000016319	BCL6B	100	90.147	Ailuropoda_melanoleuca
ENSRNOG00000059956	Bcl6b	99	42.418	ENSACIG00000016645	bcl6b	95	48.975	Amphilophus_citrinellus
ENSRNOG00000059956	Bcl6b	99	43.243	ENSAOCG00000017838	bcl6b	97	47.182	Amphiprion_ocellaris
ENSRNOG00000059956	Bcl6b	98	46.442	ENSAPEG00000007673	bcl6b	95	44.569	Amphiprion_percula
ENSRNOG00000059956	Bcl6b	98	45.772	ENSATEG00000020121	bcl6b	78	55.725	Anabas_testudineus
ENSRNOG00000059956	Bcl6b	100	90.397	ENSANAG00000038241	BCL6B	100	90.397	Aotus_nancymaae
ENSRNOG00000059956	Bcl6b	99	42.268	ENSACLG00000006465	bcl6b	94	50.104	Astatotilapia_calliptera
ENSRNOG00000059956	Bcl6b	98	47.948	ENSAMXG00000012978	bcl6b	79	67.188	Astyanax_mexicanus
ENSRNOG00000059956	Bcl6b	100	87.815	ENSBTAG00000020854	BCL6B	100	88.655	Bos_taurus
ENSRNOG00000059956	Bcl6b	100	89.331	ENSCJAG00000016905	BCL6B	100	89.331	Callithrix_jacchus
ENSRNOG00000059956	Bcl6b	99	90.126	ENSCAFG00000015968	BCL6B	99	90.126	Canis_familiaris
ENSRNOG00000059956	Bcl6b	99	90.126	ENSCAFG00020010599	BCL6B	99	90.126	Canis_lupus_dingo
ENSRNOG00000059956	Bcl6b	100	88.235	ENSCHIG00000013253	BCL6B	100	88.235	Capra_hircus
ENSRNOG00000059956	Bcl6b	100	90.776	ENSTSYG00000010666	BCL6B	100	90.776	Carlito_syrichta
ENSRNOG00000059956	Bcl6b	100	87.631	ENSCPOG00000004066	BCL6B	100	87.631	Cavia_porcellus
ENSRNOG00000059956	Bcl6b	100	90.377	ENSCCAG00000023607	BCL6B	100	90.377	Cebus_capucinus
ENSRNOG00000059956	Bcl6b	100	89.727	ENSCATG00000006169	BCL6B	100	89.727	Cercocebus_atys
ENSRNOG00000059956	Bcl6b	99	89.241	ENSCLAG00000014925	BCL6B	99	89.053	Chinchilla_lanigera
ENSRNOG00000059956	Bcl6b	100	90.147	ENSCSAG00000012171	BCL6B	100	90.147	Chlorocebus_sabaeus
ENSRNOG00000059956	Bcl6b	100	89.937	ENSCANG00000036710	BCL6B	100	89.937	Colobus_angolensis_palliatus
ENSRNOG00000059956	Bcl6b	100	93.697	ENSCGRG00001013044	Bcl6b	100	93.697	Cricetulus_griseus_chok1gshd
ENSRNOG00000059956	Bcl6b	92	92.711	ENSCGRG00000008325	Bcl6b	92	92.711	Cricetulus_griseus_crigri
ENSRNOG00000059956	Bcl6b	98	46.328	ENSCSEG00000001042	bcl6b	95	44.925	Cynoglossus_semilaevis
ENSRNOG00000059956	Bcl6b	98	46.654	ENSCVAG00000005449	bcl6b	96	46.097	Cyprinodon_variegatus
ENSRNOG00000059956	Bcl6b	98	40.602	ENSDARG00000069335	bcl6b	94	47.451	Danio_rerio
ENSRNOG00000059956	Bcl6b	100	88.260	ENSDNOG00000035586	BCL6B	100	88.260	Dasypus_novemcinctus
ENSRNOG00000059956	Bcl6b	67	98.507	ENSDORG00000005538	Bcl6b	100	98.507	Dipodomys_ordii
ENSRNOG00000059956	Bcl6b	97	86.105	ENSETEG00000012364	BCL6B	100	86.105	Echinops_telfairi
ENSRNOG00000059956	Bcl6b	100	90.776	ENSEASG00005017913	BCL6B	100	90.776	Equus_asinus_asinus
ENSRNOG00000059956	Bcl6b	100	90.776	ENSECAG00000023771	BCL6B	100	90.776	Equus_caballus
ENSRNOG00000059956	Bcl6b	100	88.889	ENSFCAG00000001356	BCL6B	100	89.308	Felis_catus
ENSRNOG00000059956	Bcl6b	100	88.889	ENSFDAG00000018237	BCL6B	100	88.889	Fukomys_damarensis
ENSRNOG00000059956	Bcl6b	98	46.369	ENSFHEG00000001661	bcl6b	96	46.369	Fundulus_heteroclitus
ENSRNOG00000059956	Bcl6b	97	40.373	ENSGMOG00000013899	bcl6b	96	44.082	Gadus_morhua
ENSRNOG00000059956	Bcl6b	98	46.435	ENSGAFG00000005214	bcl6b	88	46.252	Gambusia_affinis
ENSRNOG00000059956	Bcl6b	99	52.075	ENSGACG00000019349	bcl6b	97	51.230	Gasterosteus_aculeatus
ENSRNOG00000059956	Bcl6b	100	89.979	ENSGGOG00000009787	BCL6B	100	89.979	Gorilla_gorilla
ENSRNOG00000059956	Bcl6b	98	43.364	ENSHBUG00000018170	bcl6b	51	77.622	Haplochromis_burtoni
ENSRNOG00000059956	Bcl6b	100	89.727	ENSHGLG00000013098	BCL6B	100	89.727	Heterocephalus_glaber_female
ENSRNOG00000059956	Bcl6b	100	89.727	ENSHGLG00100006858	BCL6B	100	89.727	Heterocephalus_glaber_male
ENSRNOG00000059956	Bcl6b	98	48.446	ENSIPUG00000000555	bcl6b	77	66.154	Ictalurus_punctatus
ENSRNOG00000059956	Bcl6b	100	87.421	ENSSTOG00000006365	BCL6B	100	87.421	Ictidomys_tridecemlineatus
ENSRNOG00000059956	Bcl6b	100	88.912	ENSJJAG00000023524	Bcl6b	100	89.121	Jaculus_jaculus
ENSRNOG00000059956	Bcl6b	99	37.790	ENSKMAG00000018952	bcl6b	95	45.826	Kryptolebias_marmoratus
ENSRNOG00000059956	Bcl6b	100	46.474	ENSLBEG00000028080	bcl6b	79	55.000	Labrus_bergylta
ENSRNOG00000059956	Bcl6b	97	63.077	ENSLOCG00000013298	bcl6b	66	63.077	Lepisosteus_oculatus
ENSRNOG00000059956	Bcl6b	100	88.679	ENSLAFG00000006642	BCL6B	100	88.679	Loxodonta_africana
ENSRNOG00000059956	Bcl6b	100	89.937	ENSMFAG00000042774	BCL6B	100	89.937	Macaca_fascicularis
ENSRNOG00000059956	Bcl6b	100	89.937	ENSMMUG00000016268	BCL6B	96	95.385	Macaca_mulatta
ENSRNOG00000059956	Bcl6b	100	90.147	ENSMNEG00000041667	BCL6B	100	90.147	Macaca_nemestrina
ENSRNOG00000059956	Bcl6b	100	90.147	ENSMLEG00000037861	BCL6B	100	90.147	Mandrillus_leucophaeus
ENSRNOG00000059956	Bcl6b	98	47.495	ENSMAMG00000002865	bcl6b	78	58.015	Mastacembelus_armatus
ENSRNOG00000059956	Bcl6b	99	37.950	ENSMZEG00005021509	bcl6b	53	50.000	Maylandia_zebra
ENSRNOG00000059956	Bcl6b	100	92.857	ENSMAUG00000018651	Bcl6b	100	92.857	Mesocricetus_auratus
ENSRNOG00000059956	Bcl6b	100	89.099	ENSMICG00000041989	BCL6B	80	89.099	Microcebus_murinus
ENSRNOG00000059956	Bcl6b	100	92.662	ENSMOCG00000019797	Bcl6b	100	93.082	Microtus_ochrogaster
ENSRNOG00000059956	Bcl6b	99	49.478	ENSMMOG00000012539	bcl6b	96	48.560	Mola_mola
ENSRNOG00000059956	Bcl6b	100	70.370	ENSMODG00000006161	BCL6B	99	72.131	Monodelphis_domestica
ENSRNOG00000059956	Bcl6b	99	86.719	ENSMALG00000009070	bcl6b	97	86.719	Monopterus_albus
ENSRNOG00000059956	Bcl6b	100	95.798	MGP_CAROLIEiJ_G0016622	Bcl6b	100	95.798	Mus_caroli
ENSRNOG00000059956	Bcl6b	100	95.798	ENSMUSG00000000317	Bcl6b	100	95.798	Mus_musculus
ENSRNOG00000059956	Bcl6b	100	94.328	MGP_PahariEiJ_G0017753	Bcl6b	100	94.958	Mus_pahari
ENSRNOG00000059956	Bcl6b	100	95.588	MGP_SPRETEiJ_G0017458	Bcl6b	100	95.588	Mus_spretus
ENSRNOG00000059956	Bcl6b	100	89.937	ENSMPUG00000010670	BCL6B	99	89.937	Mustela_putorius_furo
ENSRNOG00000059956	Bcl6b	100	89.121	ENSMLUG00000003564	-	100	89.121	Myotis_lucifugus
ENSRNOG00000059956	Bcl6b	100	88.889	ENSNGAG00000017106	Bcl6b	100	88.889	Nannospalax_galili
ENSRNOG00000059956	Bcl6b	99	38.692	ENSNBRG00000002571	bcl6b	81	55.882	Neolamprologus_brichardi
ENSRNOG00000059956	Bcl6b	100	89.121	ENSNLEG00000009340	BCL6B	100	89.121	Nomascus_leucogenys
ENSRNOG00000059956	Bcl6b	99	69.874	ENSMEUG00000000375	BCL6B	99	70.894	Notamacropus_eugenii
ENSRNOG00000059956	Bcl6b	100	87.631	ENSOPRG00000006070	BCL6B	100	87.631	Ochotona_princeps
ENSRNOG00000059956	Bcl6b	100	89.308	ENSODEG00000017360	BCL6B	100	89.308	Octodon_degus
ENSRNOG00000059956	Bcl6b	97	55.714	ENSONIG00000004819	bcl6b	73	55.714	Oreochromis_niloticus
ENSRNOG00000059956	Bcl6b	100	43.636	ENSOANG00000006441	-	78	76.271	Ornithorhynchus_anatinus
ENSRNOG00000059956	Bcl6b	63	77.632	ENSOCUG00000002274	BCL6B	99	77.632	Oryctolagus_cuniculus
ENSRNOG00000059956	Bcl6b	98	43.096	ENSORLG00000006659	bcl6b	94	46.444	Oryzias_latipes
ENSRNOG00000059956	Bcl6b	94	52.727	ENSORLG00020000238	bcl6b	95	46.435	Oryzias_latipes_hni
ENSRNOG00000059956	Bcl6b	98	46.629	ENSORLG00015006618	bcl6b	95	46.629	Oryzias_latipes_hsok
ENSRNOG00000059956	Bcl6b	100	88.050	ENSOGAG00000027908	BCL6B	100	88.050	Otolemur_garnettii
ENSRNOG00000059956	Bcl6b	100	88.445	ENSOARG00000009610	BCL6B	100	88.445	Ovis_aries
ENSRNOG00000059956	Bcl6b	100	89.979	ENSPPAG00000033435	BCL6B	100	89.979	Pan_paniscus
ENSRNOG00000059956	Bcl6b	100	88.889	ENSPPRG00000001009	BCL6B	100	89.308	Panthera_pardus
ENSRNOG00000059956	Bcl6b	100	74.451	ENSPTIG00000005476	BCL6B	100	76.447	Panthera_tigris_altaica
ENSRNOG00000059956	Bcl6b	100	89.979	ENSPTRG00000008656	BCL6B	100	89.979	Pan_troglodytes
ENSRNOG00000059956	Bcl6b	100	89.937	ENSPANG00000024201	BCL6B	100	89.937	Papio_anubis
ENSRNOG00000059956	Bcl6b	98	60.870	ENSPKIG00000004089	bcl6b	78	60.870	Paramormyrops_kingsleyae
ENSRNOG00000059956	Bcl6b	99	56.522	ENSPSIG00000013071	BCL6B	91	57.645	Pelodiscus_sinensis
ENSRNOG00000059956	Bcl6b	95	85.156	ENSPMGG00000004285	bcl6b	94	85.156	Periophthalmus_magnuspinnatus
ENSRNOG00000059956	Bcl6b	100	93.697	ENSPEMG00000016932	Bcl6b	100	93.697	Peromyscus_maniculatus_bairdii
ENSRNOG00000059956	Bcl6b	100	72.016	ENSPCIG00000009639	BCL6B	99	72.634	Phascolarctos_cinereus
ENSRNOG00000059956	Bcl6b	93	56.818	ENSPFOG00000009503	bcl6b	69	56.818	Poecilia_formosa
ENSRNOG00000059956	Bcl6b	97	46.197	ENSPLAG00000003629	bcl6b	79	56.061	Poecilia_latipinna
ENSRNOG00000059956	Bcl6b	98	46.239	ENSPMEG00000016714	bcl6b	79	56.818	Poecilia_mexicana
ENSRNOG00000059956	Bcl6b	98	45.370	ENSPREG00000012637	bcl6b	96	45.926	Poecilia_reticulata
ENSRNOG00000059956	Bcl6b	100	90.147	ENSPPYG00000007891	BCL6B	100	90.147	Pongo_abelii
ENSRNOG00000059956	Bcl6b	100	85.954	ENSPCAG00000013548	BCL6B	99	85.954	Procavia_capensis
ENSRNOG00000059956	Bcl6b	100	89.540	ENSPCOG00000026491	BCL6B	100	89.540	Propithecus_coquereli
ENSRNOG00000059956	Bcl6b	98	39.209	ENSPNAG00000025921	bcl6b	77	63.780	Pygocentrus_nattereri
ENSRNOG00000059956	Bcl6b	100	89.937	ENSRROG00000044570	BCL6B	100	89.937	Rhinopithecus_roxellana
ENSRNOG00000059956	Bcl6b	100	88.727	ENSSBOG00000025653	BCL6B	100	89.353	Saimiri_boliviensis_boliviensis
ENSRNOG00000059956	Bcl6b	98	68.367	ENSSHAG00000000166	BCL6B	99	70.612	Sarcophilus_harrisii
ENSRNOG00000059956	Bcl6b	100	45.530	ENSSFOG00015021270	bcl6b	96	50.936	Scleropages_formosus
ENSRNOG00000059956	Bcl6b	98	45.966	ENSSMAG00000008428	bcl6b	95	46.023	Scophthalmus_maximus
ENSRNOG00000059956	Bcl6b	98	47.004	ENSSDUG00000020890	bcl6b	96	46.442	Seriola_dumerili
ENSRNOG00000059956	Bcl6b	98	50.722	ENSSLDG00000021148	bcl6b	97	50.622	Seriola_lalandi_dorsalis
ENSRNOG00000059956	Bcl6b	100	79.665	ENSSARG00000014055	BCL6B	100	79.665	Sorex_araneus
ENSRNOG00000059956	Bcl6b	100	87.992	ENSSSCG00000017927	BCL6B	100	88.199	Sus_scrofa
ENSRNOG00000059956	Bcl6b	100	42.600	ENSTRUG00000013220	bcl6b	98	47.505	Takifugu_rubripes
ENSRNOG00000059956	Bcl6b	97	54.362	ENSTNIG00000002560	-	87	46.903	Tetraodon_nigroviridis
ENSRNOG00000059956	Bcl6b	100	90.985	ENSTBEG00000005792	BCL6B	100	90.985	Tupaia_belangeri
ENSRNOG00000059956	Bcl6b	91	89.220	ENSTTRG00000003982	BCL6B	100	89.220	Tursiops_truncatus
ENSRNOG00000059956	Bcl6b	100	81.971	ENSUAMG00000021378	BCL6B	100	81.971	Ursus_americanus
ENSRNOG00000059956	Bcl6b	95	75.055	ENSUMAG00000014629	BCL6B	96	75.055	Ursus_maritimus
ENSRNOG00000059956	Bcl6b	73	97.744	ENSVPAG00000003583	BCL6B	74	97.744	Vicugna_pacos
ENSRNOG00000059956	Bcl6b	99	90.336	ENSVVUG00000027606	BCL6B	99	90.336	Vulpes_vulpes
ENSRNOG00000059956	Bcl6b	98	47.048	ENSXCOG00000001753	bcl6b	97	49.692	Xiphophorus_couchianus
ENSRNOG00000059956	Bcl6b	98	46.211	ENSXMAG00000015613	bcl6b	95	46.580	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003677	DNA binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component