EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000060742 (Gene tree)
Gene ID: -
Gene Symbol: AABR07029809.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 5276 bases
Position: chr10:52478050-52483325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074207	RVT_1	PF00078.27	2.9e-54	1	1
ENSRNOP00000074207	Transposase_22	PF02994.14	1.1e-46	1	1
ENSRNOP00000074207	Exo_endo_phos	PF03372.23	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000083485	AABR07029809.1-201	4887	-	ENSRNOP00000074207	1629 (aa)	-	A0A0G2K7H3

Gene Model

Click here to download ENSRNOG00000060742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000060742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000060742	AABR07029809.1	100	98.098	ENSRNOG00000054519	AABR07053179.1	95	98.098
ENSRNOG00000060742	AABR07029809.1	99	98.072	ENSRNOG00000056748	AC229945.1	100	98.072
ENSRNOG00000060742	AABR07029809.1	100	98.224	ENSRNOG00000059133	AABR07020537.1	98	98.224
ENSRNOG00000060742	AABR07029809.1	58	93.995	ENSRNOG00000060618	AABR07027267.1	69	98.895
ENSRNOG00000060742	AABR07029809.1	55	95.956	ENSRNOG00000005861	Hsd11b1	80	95.956
ENSRNOG00000060742	AABR07029809.1	100	98.958	ENSRNOG00000059691	AABR07033318.1	95	98.958
ENSRNOG00000060742	AABR07029809.1	99	99.133	ENSRNOG00000047294	AABR07043115.1	100	99.133
ENSRNOG00000060742	AABR07029809.1	59	93.298	ENSRNOG00000045583	AABR07002068.1	71	98.295
ENSRNOG00000060742	AABR07029809.1	100	97.730	ENSRNOG00000049504	AABR07009221.1	96	97.730
ENSRNOG00000060742	AABR07029809.1	100	97.975	ENSRNOG00000058209	AABR07063893.1	99	97.975
ENSRNOG00000060742	AABR07029809.1	62	98.857	ENSRNOG00000057039	AC124874.1	92	98.857
ENSRNOG00000060742	AABR07029809.1	59	92.432	ENSRNOG00000034030	AC130162.1	72	92.432
ENSRNOG00000060742	AABR07029809.1	58	93.298	ENSRNOG00000058277	AC080157.1	70	98.295
ENSRNOG00000060742	AABR07029809.1	100	97.426	ENSRNOG00000056033	AC111632.2	98	97.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000060742	AABR07029809.1	53	65.658	ENSBTAG00000051999	-	99	65.965	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	52	67.219	ENSBTAG00000052305	-	89	67.219	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	63	64.382	ENSBTAG00000050534	-	91	64.382	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	66	64.110	ENSBTAG00000049055	-	92	64.110	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	64	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	72	63.432	ENSBTAG00000050912	-	92	63.432	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	68	63.342	ENSBTAG00000053324	-	93	63.342	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	72	63.432	ENSBTAG00000050847	-	92	63.432	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	63	63.967	ENSBTAG00000054175	-	91	63.967	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	52	65.880	ENSBTAG00000051119	-	97	65.880	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	57	65.551	ENSBTAG00000055052	-	99	65.551	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	70	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	62	64.110	ENSBTAG00000054392	-	97	64.110	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	52	64.747	ENSBTAG00000050251	-	99	64.747	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	52	65.452	ENSBTAG00000054826	-	98	65.452	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	68	63.522	ENSBTAG00000051208	-	92	63.522	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	72	63.342	ENSBTAG00000050965	-	92	63.342	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	72	63.522	ENSBTAG00000053316	-	92	63.522	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	72	63.522	ENSBTAG00000049649	-	92	63.751	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	50	66.420	ENSBTAG00000052047	-	100	66.420	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	54	65.533	ENSBTAG00000051121	-	99	65.533	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	54	66.065	ENSBTAG00000049728	-	99	66.065	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	72	63.342	ENSBTAG00000051842	-	92	63.342	Bos_taurus
ENSRNOG00000060742	AABR07029809.1	53	66.584	ENSCHIG00000008599	-	90	66.584	Capra_hircus
ENSRNOG00000060742	AABR07029809.1	55	66.388	ENSCHIG00000008419	-	90	66.388	Capra_hircus
ENSRNOG00000060742	AABR07029809.1	72	75.428	ENSCGRG00000019173	-	91	75.428	Cricetulus_griseus_crigri
ENSRNOG00000060742	AABR07029809.1	67	75.629	ENSCGRG00000019462	-	92	75.629	Cricetulus_griseus_crigri
ENSRNOG00000060742	AABR07029809.1	68	75.428	ENSCGRG00000018650	-	89	75.428	Cricetulus_griseus_crigri
ENSRNOG00000060742	AABR07029809.1	72	75.428	ENSCGRG00000018654	-	91	75.428	Cricetulus_griseus_crigri
ENSRNOG00000060742	AABR07029809.1	72	75.428	ENSCGRG00000019476	-	92	75.428	Cricetulus_griseus_crigri
ENSRNOG00000060742	AABR07029809.1	64	64.843	ENSOCUG00000029721	-	91	64.843	Oryctolagus_cuniculus
ENSRNOG00000060742	AABR07029809.1	64	63.073	ENSOCUG00000029631	-	100	63.073	Oryctolagus_cuniculus
ENSRNOG00000060742	AABR07029809.1	66	63.960	ENSOARG00000008210	-	89	63.960	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	72	63.522	ENSOARG00000001175	-	92	63.522	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	72	63.612	ENSOARG00000010889	-	92	63.612	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	66	64.012	ENSOARG00000005813	-	92	64.012	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	57	63.362	ENSOARG00000011096	-	84	63.362	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	51	67.451	ENSOARG00000006683	-	88	67.451	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	72	63.522	ENSOARG00000000057	-	92	63.522	Ovis_aries
ENSRNOG00000060742	AABR07029809.1	51	65.738	ENSSSCG00000037083	-	99	65.780	Sus_scrofa
ENSRNOG00000060742	AABR07029809.1	68	63.816	ENSSSCG00000036442	-	95	63.816	Sus_scrofa
ENSRNOG00000060742	AABR07029809.1	53	67.213	ENSSSCG00000040911	-	88	67.213	Sus_scrofa
ENSRNOG00000060742	AABR07029809.1	54	64.932	ENSSSCG00000035697	-	91	64.892	Sus_scrofa
ENSRNOG00000060742	AABR07029809.1	72	67.213	ENSSSCG00000040939	-	92	67.213	Sus_scrofa
ENSRNOG00000060742	AABR07029809.1	72	65.079	ENSSSCG00000039414	-	92	65.079	Sus_scrofa