EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000061039 (Gene tree)
Gene ID: 292536
Gene Symbol: Prpf31
Alias: LOC292536
Full Name: pre-mRNA processing factor 31
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 11676 bases
Position: chr1:64150786-64162461
Accession: 1305832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000072903	Prp31_C	PF09785.9	9.3e-46	1	1
ENSRNOP00000072903	Nop	PF01798.18	8.7e-84	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091739	-	2404	-	ENSRNOP00000072903	499 (aa)	-	D3ZI68

Gene Model

Click here to download ENSRNOG00000061039's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000061039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000061039	Prpf31	100	99.399	ENSG00000105618	PRPF31	100	99.399	Homo_sapiens
ENSRNOG00000061039	Prpf31	93	85.745	ENSAPOG00000020310	prpf31	97	85.745	Acanthochromis_polyacanthus
ENSRNOG00000061039	Prpf31	100	99.399	ENSAMEG00000004502	PRPF31	100	99.399	Ailuropoda_melanoleuca
ENSRNOG00000061039	Prpf31	99	83.168	ENSACIG00000006591	prpf31	91	86.177	Amphilophus_citrinellus
ENSRNOG00000061039	Prpf31	99	83.773	ENSAOCG00000021333	prpf31	93	85.652	Amphiprion_ocellaris
ENSRNOG00000061039	Prpf31	99	83.773	ENSAPEG00000008035	prpf31	93	85.652	Amphiprion_percula
ENSRNOG00000061039	Prpf31	99	82.970	ENSATEG00000022705	prpf31	91	85.745	Anabas_testudineus
ENSRNOG00000061039	Prpf31	96	94.990	ENSACAG00000016061	PRPF31	94	95.745	Anolis_carolinensis
ENSRNOG00000061039	Prpf31	84	99.284	ENSANAG00000020822	PRPF31	100	99.284	Aotus_nancymaae
ENSRNOG00000061039	Prpf31	99	83.532	ENSACLG00000021238	prpf31	91	85.961	Astatotilapia_calliptera
ENSRNOG00000061039	Prpf31	99	82.961	ENSAMXG00000012329	prpf31	93	84.017	Astyanax_mexicanus
ENSRNOG00000061039	Prpf31	100	99.399	ENSBTAG00000007757	PRPF31	100	99.399	Bos_taurus
ENSRNOG00000061039	Prpf31	94	46.473	WBGene00022458	prp-31	91	47.174	Caenorhabditis_elegans
ENSRNOG00000061039	Prpf31	100	99.399	ENSCJAG00000018525	PRPF31	100	99.399	Callithrix_jacchus
ENSRNOG00000061039	Prpf31	100	99.599	ENSCAFG00000002700	PRPF31	100	99.599	Canis_familiaris
ENSRNOG00000061039	Prpf31	100	99.599	ENSCAFG00020018376	PRPF31	100	99.599	Canis_lupus_dingo
ENSRNOG00000061039	Prpf31	94	95.532	ENSCHIG00000021020	PRPF31	94	95.532	Capra_hircus
ENSRNOG00000061039	Prpf31	100	99.399	ENSTSYG00000013569	PRPF31	100	99.399	Carlito_syrichta
ENSRNOG00000061039	Prpf31	100	98.597	ENSCAPG00000013797	PRPF31	100	98.597	Cavia_aperea
ENSRNOG00000061039	Prpf31	100	98.597	ENSCPOG00000011507	PRPF31	100	98.597	Cavia_porcellus
ENSRNOG00000061039	Prpf31	100	99.399	ENSCCAG00000020552	-	100	99.399	Cebus_capucinus
ENSRNOG00000061039	Prpf31	92	88.453	ENSCCAG00000022236	-	98	88.453	Cebus_capucinus
ENSRNOG00000061039	Prpf31	100	99.198	ENSCATG00000006020	PRPF31	100	99.198	Cercocebus_atys
ENSRNOG00000061039	Prpf31	100	98.397	ENSCLAG00000001700	PRPF31	100	98.397	Chinchilla_lanigera
ENSRNOG00000061039	Prpf31	100	99.399	ENSCSAG00000001903	PRPF31	100	99.399	Chlorocebus_sabaeus
ENSRNOG00000061039	Prpf31	89	95.485	ENSCPBG00000011670	PRPF31	92	95.485	Chrysemys_picta_bellii
ENSRNOG00000061039	Prpf31	98	62.772	ENSCSAVG00000010862	-	87	63.812	Ciona_savignyi
ENSRNOG00000061039	Prpf31	100	99.198	ENSCANG00000029967	PRPF31	100	99.198	Colobus_angolensis_palliatus
ENSRNOG00000061039	Prpf31	100	100.000	ENSCGRG00001004873	Prpf31	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000061039	Prpf31	94	99.572	ENSCGRG00000012910	Prpf31	100	99.572	Cricetulus_griseus_crigri
ENSRNOG00000061039	Prpf31	98	82.400	ENSCSEG00000018961	prpf31	91	85.033	Cynoglossus_semilaevis
ENSRNOG00000061039	Prpf31	99	84.990	ENSCVAG00000000226	prpf31	93	85.931	Cyprinodon_variegatus
ENSRNOG00000061039	Prpf31	99	82.609	ENSDARG00000095904	prpf31	91	85.776	Danio_rerio
ENSRNOG00000061039	Prpf31	100	99.198	ENSDNOG00000032884	PRPF31	99	99.198	Dasypus_novemcinctus
ENSRNOG00000061039	Prpf31	100	99.198	ENSDORG00000008022	Prpf31	100	99.198	Dipodomys_ordii
ENSRNOG00000061039	Prpf31	98	60.239	FBgn0036487	Prp31	89	63.252	Drosophila_melanogaster
ENSRNOG00000061039	Prpf31	82	98.291	ENSETEG00000017891	PRPF31	82	98.291	Echinops_telfairi
ENSRNOG00000061039	Prpf31	77	55.729	ENSEBUG00000004819	prpf31	90	55.208	Eptatretus_burgeri
ENSRNOG00000061039	Prpf31	100	99.599	ENSEASG00005021593	PRPF31	100	99.599	Equus_asinus_asinus
ENSRNOG00000061039	Prpf31	100	99.599	ENSECAG00000020667	PRPF31	100	99.599	Equus_caballus
ENSRNOG00000061039	Prpf31	77	90.625	ENSEEUG00000006128	PRPF31	100	90.625	Erinaceus_europaeus
ENSRNOG00000061039	Prpf31	99	82.271	ENSELUG00000014820	prpf31	94	83.051	Esox_lucius
ENSRNOG00000061039	Prpf31	100	99.599	ENSFCAG00000014037	PRPF31	100	99.599	Felis_catus
ENSRNOG00000061039	Prpf31	100	98.798	ENSFDAG00000011961	PRPF31	100	98.798	Fukomys_damarensis
ENSRNOG00000061039	Prpf31	82	89.944	ENSFHEG00000003642	prpf31	66	88.268	Fundulus_heteroclitus
ENSRNOG00000061039	Prpf31	99	81.782	ENSGMOG00000005345	prpf31	89	84.199	Gadus_morhua
ENSRNOG00000061039	Prpf31	99	84.584	ENSGAFG00000013128	prpf31	94	85.714	Gambusia_affinis
ENSRNOG00000061039	Prpf31	99	81.584	ENSGACG00000011464	prpf31	91	84.449	Gasterosteus_aculeatus
ENSRNOG00000061039	Prpf31	96	94.979	ENSGAGG00000000670	PRPF31	94	95.957	Gopherus_agassizii
ENSRNOG00000061039	Prpf31	100	99.399	ENSGGOG00000016516	PRPF31	100	99.399	Gorilla_gorilla
ENSRNOG00000061039	Prpf31	99	83.333	ENSHBUG00000005311	prpf31	91	85.745	Haplochromis_burtoni
ENSRNOG00000061039	Prpf31	100	98.196	ENSHGLG00000010504	PRPF31	100	98.196	Heterocephalus_glaber_female
ENSRNOG00000061039	Prpf31	100	86.172	ENSHGLG00100005911	PRPF31	100	86.172	Heterocephalus_glaber_male
ENSRNOG00000061039	Prpf31	99	81.584	ENSHCOG00000020890	prpf31	91	84.449	Hippocampus_comes
ENSRNOG00000061039	Prpf31	99	81.782	ENSIPUG00000000171	prpf31	91	84.449	Ictalurus_punctatus
ENSRNOG00000061039	Prpf31	100	99.198	ENSSTOG00000001287	PRPF31	100	99.198	Ictidomys_tridecemlineatus
ENSRNOG00000061039	Prpf31	100	99.599	ENSJJAG00000015594	Prpf31	100	99.599	Jaculus_jaculus
ENSRNOG00000061039	Prpf31	99	82.376	ENSKMAG00000004967	prpf31	91	85.313	Kryptolebias_marmoratus
ENSRNOG00000061039	Prpf31	99	82.574	ENSLBEG00000017225	prpf31	91	85.097	Labrus_bergylta
ENSRNOG00000061039	Prpf31	93	81.602	ENSLACG00000009449	PRPF31	93	81.602	Latimeria_chalumnae
ENSRNOG00000061039	Prpf31	99	76.392	ENSLOCG00000000007	prpf31	90	80.000	Lepisosteus_oculatus
ENSRNOG00000061039	Prpf31	100	99.399	ENSLAFG00000004559	PRPF31	100	99.399	Loxodonta_africana
ENSRNOG00000061039	Prpf31	100	99.399	ENSMFAG00000001108	PRPF31	100	99.399	Macaca_fascicularis
ENSRNOG00000061039	Prpf31	100	99.399	ENSMMUG00000022297	PRPF31	100	99.399	Macaca_mulatta
ENSRNOG00000061039	Prpf31	100	99.399	ENSMNEG00000035943	PRPF31	100	99.399	Macaca_nemestrina
ENSRNOG00000061039	Prpf31	100	99.399	ENSMLEG00000031953	PRPF31	100	99.399	Mandrillus_leucophaeus
ENSRNOG00000061039	Prpf31	99	83.168	ENSMAMG00000019433	prpf31	91	85.714	Mastacembelus_armatus
ENSRNOG00000061039	Prpf31	99	83.532	ENSMZEG00005016314	prpf31	91	85.961	Maylandia_zebra
ENSRNOG00000061039	Prpf31	100	99.800	ENSMAUG00000011581	Prpf31	100	99.800	Mesocricetus_auratus
ENSRNOG00000061039	Prpf31	100	99.399	ENSMICG00000002355	PRPF31	100	99.399	Microcebus_murinus
ENSRNOG00000061039	Prpf31	100	100.000	ENSMOCG00000002128	Prpf31	100	100.000	Microtus_ochrogaster
ENSRNOG00000061039	Prpf31	99	81.188	ENSMMOG00000016451	prpf31	91	84.665	Mola_mola
ENSRNOG00000061039	Prpf31	100	97.194	ENSMODG00000004098	PRPF31	100	97.194	Monodelphis_domestica
ENSRNOG00000061039	Prpf31	99	82.591	ENSMALG00000009251	prpf31	93	83.948	Monopterus_albus
ENSRNOG00000061039	Prpf31	100	100.000	MGP_CAROLIEiJ_G0029094	Prpf31	100	100.000	Mus_caroli
ENSRNOG00000061039	Prpf31	100	99.599	ENSMUSG00000008373	Prpf31	100	99.599	Mus_musculus
ENSRNOG00000061039	Prpf31	100	99.599	MGP_PahariEiJ_G0020963	Prpf31	100	99.599	Mus_pahari
ENSRNOG00000061039	Prpf31	99	100.000	MGP_SPRETEiJ_G0030147	Prpf31	99	100.000	Mus_spretus
ENSRNOG00000061039	Prpf31	100	99.599	ENSMPUG00000010341	PRPF31	100	99.599	Mustela_putorius_furo
ENSRNOG00000061039	Prpf31	99	96.787	ENSMLUG00000016862	PRPF31	99	96.787	Myotis_lucifugus
ENSRNOG00000061039	Prpf31	100	99.399	ENSNGAG00000024131	Prpf31	100	99.399	Nannospalax_galili
ENSRNOG00000061039	Prpf31	99	83.333	ENSNBRG00000002354	prpf31	91	85.745	Neolamprologus_brichardi
ENSRNOG00000061039	Prpf31	84	92.381	ENSNLEG00000006261	-	91	92.381	Nomascus_leucogenys
ENSRNOG00000061039	Prpf31	79	89.141	ENSMEUG00000002943	PRPF31	93	89.141	Notamacropus_eugenii
ENSRNOG00000061039	Prpf31	58	98.616	ENSOPRG00000000055	PRPF31	100	98.616	Ochotona_princeps
ENSRNOG00000061039	Prpf31	100	98.798	ENSODEG00000000855	PRPF31	100	98.798	Octodon_degus
ENSRNOG00000061039	Prpf31	100	82.617	ENSONIG00000006574	prpf31	91	85.961	Oreochromis_niloticus
ENSRNOG00000061039	Prpf31	81	76.049	ENSOANG00000009386	-	93	77.525	Ornithorhynchus_anatinus
ENSRNOG00000061039	Prpf31	94	90.234	ENSOCUG00000002027	PRPF31	94	90.234	Oryctolagus_cuniculus
ENSRNOG00000061039	Prpf31	99	84.211	ENSORLG00000011189	prpf31	93	85.498	Oryzias_latipes
ENSRNOG00000061039	Prpf31	99	83.976	ENSORLG00020007965	prpf31	93	85.435	Oryzias_latipes_hni
ENSRNOG00000061039	Prpf31	99	81.854	ENSORLG00015013676	prpf31	91	85.498	Oryzias_latipes_hsok
ENSRNOG00000061039	Prpf31	99	81.657	ENSOMEG00000010384	prpf31	91	85.097	Oryzias_melastigma
ENSRNOG00000061039	Prpf31	62	99.674	ENSOGAG00000006936	PRPF31	100	99.674	Otolemur_garnettii
ENSRNOG00000061039	Prpf31	94	86.383	ENSOARG00000003033	PRPF31	95	86.383	Ovis_aries
ENSRNOG00000061039	Prpf31	100	99.399	ENSPPAG00000032209	PRPF31	100	99.399	Pan_paniscus
ENSRNOG00000061039	Prpf31	100	99.599	ENSPPRG00000011686	PRPF31	100	99.599	Panthera_pardus
ENSRNOG00000061039	Prpf31	100	99.599	ENSPTIG00000008467	PRPF31	100	99.599	Panthera_tigris_altaica
ENSRNOG00000061039	Prpf31	100	99.399	ENSPTRG00000045480	-	100	99.399	Pan_troglodytes
ENSRNOG00000061039	Prpf31	100	99.399	ENSPTRG00000011443	PRPF31	100	99.399	Pan_troglodytes
ENSRNOG00000061039	Prpf31	100	99.399	ENSPANG00000025402	PRPF31	100	99.399	Papio_anubis
ENSRNOG00000061039	Prpf31	99	82.192	ENSPKIG00000011812	prpf31	92	85.684	Paramormyrops_kingsleyae
ENSRNOG00000061039	Prpf31	65	95.046	ENSPSIG00000003405	PRPF31	98	95.046	Pelodiscus_sinensis
ENSRNOG00000061039	Prpf31	100	94.790	ENSPEMG00000011678	Prpf31	100	94.790	Peromyscus_maniculatus_bairdii
ENSRNOG00000061039	Prpf31	100	97.194	ENSPCIG00000014820	PRPF31	100	97.194	Phascolarctos_cinereus
ENSRNOG00000061039	Prpf31	99	83.168	ENSPFOG00000008822	prpf31	91	85.961	Poecilia_formosa
ENSRNOG00000061039	Prpf31	99	82.574	ENSPLAG00000013314	prpf31	91	85.313	Poecilia_latipinna
ENSRNOG00000061039	Prpf31	99	84.990	ENSPMEG00000017707	prpf31	93	86.147	Poecilia_mexicana
ENSRNOG00000061039	Prpf31	99	82.574	ENSPREG00000007764	prpf31	91	85.313	Poecilia_reticulata
ENSRNOG00000061039	Prpf31	100	99.399	ENSPPYG00000010371	PRPF31	100	99.399	Pongo_abelii
ENSRNOG00000061039	Prpf31	100	75.150	ENSPCAG00000011872	PRPF31	100	75.150	Procavia_capensis
ENSRNOG00000061039	Prpf31	100	99.399	ENSPCOG00000020393	PRPF31	100	99.399	Propithecus_coquereli
ENSRNOG00000061039	Prpf31	100	98.798	ENSPVAG00000015562	PRPF31	100	98.798	Pteropus_vampyrus
ENSRNOG00000061039	Prpf31	99	83.135	ENSPNYG00000002232	prpf31	91	85.529	Pundamilia_nyererei
ENSRNOG00000061039	Prpf31	99	81.693	ENSPNAG00000003485	prpf31	91	84.979	Pygocentrus_nattereri
ENSRNOG00000061039	Prpf31	100	99.198	ENSRBIG00000034963	PRPF31	100	99.198	Rhinopithecus_bieti
ENSRNOG00000061039	Prpf31	100	99.198	ENSRROG00000038740	PRPF31	100	99.198	Rhinopithecus_roxellana
ENSRNOG00000061039	Prpf31	66	31.356	YGR091W	-	71	31.356	Saccharomyces_cerevisiae
ENSRNOG00000061039	Prpf31	100	99.399	ENSSBOG00000028915	PRPF31	100	99.399	Saimiri_boliviensis_boliviensis
ENSRNOG00000061039	Prpf31	100	97.194	ENSSHAG00000009065	PRPF31	100	97.194	Sarcophilus_harrisii
ENSRNOG00000061039	Prpf31	99	82.583	ENSSFOG00015000288	prpf31	92	85.684	Scleropages_formosus
ENSRNOG00000061039	Prpf31	99	82.376	ENSSMAG00000013211	prpf31	91	85.097	Scophthalmus_maximus
ENSRNOG00000061039	Prpf31	99	84.040	ENSSDUG00000008360	prpf31	93	85.097	Seriola_dumerili
ENSRNOG00000061039	Prpf31	99	74.213	ENSSLDG00000002851	prpf31	91	76.609	Seriola_lalandi_dorsalis
ENSRNOG00000061039	Prpf31	96	93.946	ENSSPUG00000008622	PRPF31	94	94.681	Sphenodon_punctatus
ENSRNOG00000061039	Prpf31	99	78.571	ENSSPAG00000022547	prpf31	92	81.224	Stegastes_partitus
ENSRNOG00000061039	Prpf31	100	98.998	ENSSSCG00000003263	PRPF31	100	98.998	Sus_scrofa
ENSRNOG00000061039	Prpf31	99	81.151	ENSTRUG00000015769	prpf31	91	84.416	Takifugu_rubripes
ENSRNOG00000061039	Prpf31	99	81.262	ENSTNIG00000008083	prpf31	91	84.301	Tetraodon_nigroviridis
ENSRNOG00000061039	Prpf31	94	86.200	ENSTTRG00000006566	PRPF31	94	86.200	Tursiops_truncatus
ENSRNOG00000061039	Prpf31	100	99.599	ENSUAMG00000005241	PRPF31	100	99.599	Ursus_americanus
ENSRNOG00000061039	Prpf31	100	99.599	ENSUMAG00000011212	PRPF31	100	99.599	Ursus_maritimus
ENSRNOG00000061039	Prpf31	100	99.599	ENSVVUG00000008257	PRPF31	100	99.599	Vulpes_vulpes
ENSRNOG00000061039	Prpf31	95	91.772	ENSXETG00000010916	prpf31	94	92.934	Xenopus_tropicalis
ENSRNOG00000061039	Prpf31	99	84.381	ENSXCOG00000019456	prpf31	94	85.281	Xiphophorus_couchianus
ENSRNOG00000061039	Prpf31	99	84.584	ENSXMAG00000012272	prpf31	94	85.498	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000244	spliceosomal tri-snRNP complex assembly	-	IEA	Process
GO:0000244	spliceosomal tri-snRNP complex assembly	-	ISO	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005687	U4 snRNP	21873635.	IBA	Component
GO:0005687	U4 snRNP	-	ISO	Component
GO:0005690	U4atac snRNP	-	IEA	Component
GO:0005690	U4atac snRNP	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0015030	Cajal body	-	IEA	Component
GO:0015030	Cajal body	-	ISO	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0030621	U4 snRNA binding	-	IEA	Function
GO:0030621	U4 snRNA binding	-	ISO	Function
GO:0030622	U4atac snRNA binding	-	IEA	Function
GO:0030622	U4atac snRNA binding	-	ISO	Function
GO:0043021	ribonucleoprotein complex binding	-	ISO	Function
GO:0046540	U4/U6 x U5 tri-snRNP complex	-	IEA	Component
GO:0046540	U4/U6 x U5 tri-snRNP complex	-	ISO	Component
GO:0048254	snoRNA localization	-	ISO	Process
GO:0070990	snRNP binding	-	IEA	Function
GO:0070990	snRNP binding	-	ISO	Function
GO:0071005	U2-type precatalytic spliceosome	-	IEA	Component
GO:0071005	U2-type precatalytic spliceosome	-	ISO	Component
GO:0071166	ribonucleoprotein complex localization	-	IEA	Process
GO:0071166	ribonucleoprotein complex localization	-	ISO	Process
GO:0071339	MLL1 complex	-	IEA	Component
GO:0071339	MLL1 complex	-	ISO	Component