EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000061236 (Gene tree)
Gene ID: 108348298
Gene Symbol: LOC108348298
Alias: Rsl1d1
Full Name: ribosomal L1 domain-containing protein 1-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 11349 bases
Position: chr10:4487882-4499230
Accession: 11419049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070538	Ribosomal_L1	PF00687.21	6.4e-52	1	1
ENSRNOP00000072945	Ribosomal_L1	PF00687.21	6.6e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000092119	-	1395	-	ENSRNOP00000072945	464 (aa)	-	M0RCH8
ENSRNOT00000084043	-	1383	-	ENSRNOP00000070538	460 (aa)	-	A0A0G2JY68

Gene Model

Click here to download ENSRNOG00000061236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000061236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000061236	LOC108348298	70	84.735	ENSRNOG00000032439	Rsl1d1	52	84.735
ENSRNOG00000061236	LOC108348298	100	100.000	ENSRNOG00000048608	Rsl1d1l1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000061236	LOC108348298	93	55.675	ENSG00000171490	RSL1D1	99	70.064	Homo_sapiens
ENSRNOG00000061236	LOC108348298	53	46.939	ENSAPOG00000004544	rsl1d1	84	42.151	Acanthochromis_polyacanthus
ENSRNOG00000061236	LOC108348298	91	55.965	ENSAMEG00000009570	RSL1D1	93	57.918	Ailuropoda_melanoleuca
ENSRNOG00000061236	LOC108348298	53	45.122	ENSACIG00000006608	rsl1d1	92	40.000	Amphilophus_citrinellus
ENSRNOG00000061236	LOC108348298	51	47.899	ENSAOCG00000001548	rsl1d1	84	42.229	Amphiprion_ocellaris
ENSRNOG00000061236	LOC108348298	51	47.899	ENSAPEG00000003334	rsl1d1	84	41.399	Amphiprion_percula
ENSRNOG00000061236	LOC108348298	51	48.739	ENSATEG00000009247	rsl1d1	85	43.323	Anabas_testudineus
ENSRNOG00000061236	LOC108348298	89	40.440	ENSAPLG00000004451	RSL1D1	99	40.220	Anas_platyrhynchos
ENSRNOG00000061236	LOC108348298	92	55.246	ENSANAG00000034590	-	95	56.118	Aotus_nancymaae
ENSRNOG00000061236	LOC108348298	98	49.795	ENSANAG00000026520	-	95	51.266	Aotus_nancymaae
ENSRNOG00000061236	LOC108348298	90	54.608	ENSANAG00000028185	-	93	55.066	Aotus_nancymaae
ENSRNOG00000061236	LOC108348298	73	41.246	ENSACLG00000017535	rsl1d1	86	40.401	Astatotilapia_calliptera
ENSRNOG00000061236	LOC108348298	79	39.674	ENSAMXG00000008624	rsl1d1	99	38.806	Astyanax_mexicanus
ENSRNOG00000061236	LOC108348298	95	53.178	ENSBTAG00000014588	RSL1D1	93	54.367	Bos_taurus
ENSRNOG00000061236	LOC108348298	90	56.000	ENSCJAG00000042606	-	96	56.959	Callithrix_jacchus
ENSRNOG00000061236	LOC108348298	90	55.111	ENSCJAG00000008375	-	96	56.531	Callithrix_jacchus
ENSRNOG00000061236	LOC108348298	92	56.209	ENSCAFG00000018865	RSL1D1	93	57.298	Canis_familiaris
ENSRNOG00000061236	LOC108348298	92	58.810	ENSCAFG00020024488	-	93	57.269	Canis_lupus_dingo
ENSRNOG00000061236	LOC108348298	85	46.914	ENSCAFG00020002457	-	85	46.798	Canis_lupus_dingo
ENSRNOG00000061236	LOC108348298	91	56.872	ENSCHIG00000009867	-	92	57.583	Capra_hircus
ENSRNOG00000061236	LOC108348298	91	54.505	ENSCHIG00000018658	-	93	54.846	Capra_hircus
ENSRNOG00000061236	LOC108348298	98	56.289	ENSTSYG00000009276	RSL1D1	99	56.289	Carlito_syrichta
ENSRNOG00000061236	LOC108348298	96	61.002	ENSCPOG00000010630	RSL1D1	94	63.122	Cavia_porcellus
ENSRNOG00000061236	LOC108348298	99	53.518	ENSCCAG00000031641	-	93	53.084	Cebus_capucinus
ENSRNOG00000061236	LOC108348298	99	53.629	ENSCCAG00000017391	-	95	55.485	Cebus_capucinus
ENSRNOG00000061236	LOC108348298	96	47.046	ENSCCAG00000025197	-	95	50.110	Cebus_capucinus
ENSRNOG00000061236	LOC108348298	93	53.675	ENSCATG00000031153	RSL1D1	92	56.359	Cercocebus_atys
ENSRNOG00000061236	LOC108348298	95	60.430	ENSCLAG00000010975	RSL1D1	94	63.657	Chinchilla_lanigera
ENSRNOG00000061236	LOC108348298	91	55.507	ENSCSAG00000008255	RSL1D1	98	54.792	Chlorocebus_sabaeus
ENSRNOG00000061236	LOC108348298	77	66.667	ENSCHOG00000010827	RSL1D1	74	68.939	Choloepus_hoffmanni
ENSRNOG00000061236	LOC108348298	51	56.303	ENSCPBG00000004564	RSL1D1	92	57.971	Chrysemys_picta_bellii
ENSRNOG00000061236	LOC108348298	55	31.373	ENSCSAVG00000011797	-	75	31.373	Ciona_savignyi
ENSRNOG00000061236	LOC108348298	91	55.947	ENSCANG00000029202	RSL1D1	93	55.921	Colobus_angolensis_palliatus
ENSRNOG00000061236	LOC108348298	95	74.943	ENSCGRG00001014989	Rsl1d1	96	75.172	Cricetulus_griseus_chok1gshd
ENSRNOG00000061236	LOC108348298	95	74.943	ENSCGRG00000001905	Rsl1d1	96	75.172	Cricetulus_griseus_crigri
ENSRNOG00000061236	LOC108348298	51	48.739	ENSCVAG00000000672	rsl1d1	83	40.708	Cyprinodon_variegatus
ENSRNOG00000061236	LOC108348298	52	44.490	ENSDARG00000055868	rsl1d1	96	37.284	Danio_rerio
ENSRNOG00000061236	LOC108348298	66	47.003	ENSDNOG00000047567	-	93	47.634	Dasypus_novemcinctus
ENSRNOG00000061236	LOC108348298	97	50.719	ENSDNOG00000004601	-	98	52.156	Dasypus_novemcinctus
ENSRNOG00000061236	LOC108348298	98	50.305	ENSDNOG00000040779	-	99	51.951	Dasypus_novemcinctus
ENSRNOG00000061236	LOC108348298	97	50.893	ENSDORG00000013432	-	99	51.111	Dipodomys_ordii
ENSRNOG00000061236	LOC108348298	96	56.033	ENSEASG00005011499	RSL1D1	95	57.021	Equus_asinus_asinus
ENSRNOG00000061236	LOC108348298	92	56.344	ENSECAG00000025036	RSL1D1	95	56.596	Equus_caballus
ENSRNOG00000061236	LOC108348298	70	66.667	ENSEEUG00000015569	-	79	66.667	Erinaceus_europaeus
ENSRNOG00000061236	LOC108348298	73	42.730	ENSELUG00000019243	rsl1d1	81	47.479	Esox_lucius
ENSRNOG00000061236	LOC108348298	92	58.297	ENSFCAG00000010114	RSL1D1	93	59.041	Felis_catus
ENSRNOG00000061236	LOC108348298	89	38.053	ENSFALG00000003869	RSL1D1	91	37.744	Ficedula_albicollis
ENSRNOG00000061236	LOC108348298	96	62.022	ENSFDAG00000011414	RSL1D1	93	62.617	Fukomys_damarensis
ENSRNOG00000061236	LOC108348298	55	44.106	ENSFHEG00000017235	rsl1d1	89	38.753	Fundulus_heteroclitus
ENSRNOG00000061236	LOC108348298	56	46.360	ENSGMOG00000013048	rsl1d1	92	46.360	Gadus_morhua
ENSRNOG00000061236	LOC108348298	52	52.697	ENSGALG00000033690	RSL1D1	98	40.529	Gallus_gallus
ENSRNOG00000061236	LOC108348298	51	48.117	ENSGAFG00000020794	rsl1d1	80	40.533	Gambusia_affinis
ENSRNOG00000061236	LOC108348298	83	37.310	ENSGACG00000004483	rsl1d1	97	37.563	Gasterosteus_aculeatus
ENSRNOG00000061236	LOC108348298	93	55.032	ENSGGOG00000013463	RSL1D1	93	55.315	Gorilla_gorilla
ENSRNOG00000061236	LOC108348298	73	41.840	ENSHBUG00000001551	rsl1d1	85	40.401	Haplochromis_burtoni
ENSRNOG00000061236	LOC108348298	94	61.048	ENSHGLG00000006774	RSL1D1	93	61.682	Heterocephalus_glaber_female
ENSRNOG00000061236	LOC108348298	94	61.048	ENSHGLG00100017781	RSL1D1	93	61.682	Heterocephalus_glaber_male
ENSRNOG00000061236	LOC108348298	79	40.548	ENSIPUG00000001677	rsl1d1	90	40.164	Ictalurus_punctatus
ENSRNOG00000061236	LOC108348298	84	58.993	ENSSTOG00000015400	RSL1D1	99	59.712	Ictidomys_tridecemlineatus
ENSRNOG00000061236	LOC108348298	91	60.046	ENSJJAG00000012115	Rsl1d1	95	58.986	Jaculus_jaculus
ENSRNOG00000061236	LOC108348298	52	48.536	ENSKMAG00000021908	rsl1d1	84	40.510	Kryptolebias_marmoratus
ENSRNOG00000061236	LOC108348298	53	44.082	ENSLBEG00000001076	rsl1d1	76	42.857	Labrus_bergylta
ENSRNOG00000061236	LOC108348298	52	47.699	ENSLOCG00000007416	rsl1d1	57	47.699	Lepisosteus_oculatus
ENSRNOG00000061236	LOC108348298	91	57.277	ENSLAFG00000013664	RSL1D1	91	56.912	Loxodonta_africana
ENSRNOG00000061236	LOC108348298	91	56.167	ENSMFAG00000037288	RSL1D1	98	55.000	Macaca_fascicularis
ENSRNOG00000061236	LOC108348298	91	56.167	ENSMMUG00000019632	RSL1D1	100	71.519	Macaca_mulatta
ENSRNOG00000061236	LOC108348298	91	55.947	ENSMNEG00000044196	RSL1D1	98	54.792	Macaca_nemestrina
ENSRNOG00000061236	LOC108348298	91	56.923	ENSMLEG00000042058	RSL1D1	98	55.925	Mandrillus_leucophaeus
ENSRNOG00000061236	LOC108348298	72	42.216	ENSMAMG00000004385	rsl1d1	84	42.857	Mastacembelus_armatus
ENSRNOG00000061236	LOC108348298	51	47.059	ENSMZEG00005007150	rsl1d1	86	40.401	Maylandia_zebra
ENSRNOG00000061236	LOC108348298	87	42.254	ENSMGAG00000000863	RSL1D1	97	42.377	Meleagris_gallopavo
ENSRNOG00000061236	LOC108348298	98	52.965	ENSMICG00000008229	RSL1D1	94	55.172	Microcebus_murinus
ENSRNOG00000061236	LOC108348298	94	75.058	ENSMOCG00000017724	Rsl1d1	97	75.058	Microtus_ochrogaster
ENSRNOG00000061236	LOC108348298	52	44.898	ENSMMOG00000003730	rsl1d1	86	44.186	Mola_mola
ENSRNOG00000061236	LOC108348298	79	41.509	ENSMODG00000029494	-	55	50.633	Monodelphis_domestica
ENSRNOG00000061236	LOC108348298	89	42.982	ENSMODG00000004625	-	98	43.074	Monodelphis_domestica
ENSRNOG00000061236	LOC108348298	50	47.414	ENSMALG00000009531	rsl1d1	84	40.870	Monopterus_albus
ENSRNOG00000061236	LOC108348298	99	84.868	ENSMUSG00000005846	Rsl1d1	100	84.868	Mus_musculus
ENSRNOG00000061236	LOC108348298	99	82.675	MGP_PahariEiJ_G0016164	Rsl1d1	100	82.675	Mus_pahari
ENSRNOG00000061236	LOC108348298	99	84.649	MGP_SPRETEiJ_G0021352	Rsl1d1	100	82.237	Mus_spretus
ENSRNOG00000061236	LOC108348298	92	54.894	ENSMPUG00000014548	RSL1D1	97	56.082	Mustela_putorius_furo
ENSRNOG00000061236	LOC108348298	94	57.021	ENSMLUG00000000784	RSL1D1	92	56.710	Myotis_lucifugus
ENSRNOG00000061236	LOC108348298	91	67.436	ENSNGAG00000009086	-	94	68.192	Nannospalax_galili
ENSRNOG00000061236	LOC108348298	92	65.548	ENSNGAG00000013578	-	99	65.996	Nannospalax_galili
ENSRNOG00000061236	LOC108348298	51	47.059	ENSNBRG00000002777	rsl1d1	85	42.012	Neolamprologus_brichardi
ENSRNOG00000061236	LOC108348298	72	58.333	ENSNLEG00000012149	-	92	58.310	Nomascus_leucogenys
ENSRNOG00000061236	LOC108348298	91	56.455	ENSNLEG00000010196	-	93	57.081	Nomascus_leucogenys
ENSRNOG00000061236	LOC108348298	97	55.085	ENSOPRG00000004442	-	98	55.085	Ochotona_princeps
ENSRNOG00000061236	LOC108348298	51	47.899	ENSONIG00000019757	rsl1d1	89	39.828	Oreochromis_niloticus
ENSRNOG00000061236	LOC108348298	79	45.455	ENSOANG00000009408	-	84	45.455	Ornithorhynchus_anatinus
ENSRNOG00000061236	LOC108348298	92	57.556	ENSOCUG00000004751	RSL1D1	94	57.616	Oryctolagus_cuniculus
ENSRNOG00000061236	LOC108348298	51	43.697	ENSORLG00000002877	rsl1d1	84	37.982	Oryzias_latipes
ENSRNOG00000061236	LOC108348298	57	41.328	ENSORLG00020006636	rsl1d1	77	41.328	Oryzias_latipes_hni
ENSRNOG00000061236	LOC108348298	77	39.106	ENSORLG00015005427	rsl1d1	77	41.328	Oryzias_latipes_hsok
ENSRNOG00000061236	LOC108348298	97	56.042	ENSOGAG00000015151	RSL1D1	98	54.792	Otolemur_garnettii
ENSRNOG00000061236	LOC108348298	91	54.305	ENSOARG00000006923	RSL1D1	93	55.432	Ovis_aries
ENSRNOG00000061236	LOC108348298	93	55.675	ENSPPAG00000039716	RSL1D1	98	55.487	Pan_paniscus
ENSRNOG00000061236	LOC108348298	92	57.424	ENSPPRG00000005220	RSL1D1	93	58.170	Panthera_pardus
ENSRNOG00000061236	LOC108348298	89	58.636	ENSPTIG00000005526	RSL1D1	91	59.318	Panthera_tigris_altaica
ENSRNOG00000061236	LOC108348298	93	55.460	ENSPTRG00000007777	RSL1D1	98	55.280	Pan_troglodytes
ENSRNOG00000061236	LOC108348298	91	55.947	ENSPANG00000023073	RSL1D1	93	55.921	Papio_anubis
ENSRNOG00000061236	LOC108348298	53	44.715	ENSPKIG00000022687	rsl1d1	97	35.363	Paramormyrops_kingsleyae
ENSRNOG00000061236	LOC108348298	82	46.094	ENSPSIG00000011642	RSL1D1	96	42.952	Pelodiscus_sinensis
ENSRNOG00000061236	LOC108348298	50	48.718	ENSPMGG00000022261	rsl1d1	98	40.181	Periophthalmus_magnuspinnatus
ENSRNOG00000061236	LOC108348298	98	72.687	ENSPEMG00000009523	Rsl1d1	99	74.229	Peromyscus_maniculatus_bairdii
ENSRNOG00000061236	LOC108348298	80	47.978	ENSPCIG00000026851	-	86	48.518	Phascolarctos_cinereus
ENSRNOG00000061236	LOC108348298	73	41.547	ENSPFOG00000005017	rsl1d1	92	41.349	Poecilia_formosa
ENSRNOG00000061236	LOC108348298	53	48.606	ENSPLAG00000000482	rsl1d1	72	42.012	Poecilia_latipinna
ENSRNOG00000061236	LOC108348298	51	48.305	ENSPREG00000016619	rsl1d1	62	47.899	Poecilia_reticulata
ENSRNOG00000061236	LOC108348298	94	53.881	ENSPPYG00000019335	-	92	53.302	Pongo_abelii
ENSRNOG00000061236	LOC108348298	90	55.240	ENSPPYG00000007112	RSL1D1	98	56.082	Pongo_abelii
ENSRNOG00000061236	LOC108348298	77	54.622	ENSPCAG00000011264	-	76	58.095	Procavia_capensis
ENSRNOG00000061236	LOC108348298	75	56.749	ENSPCOG00000022456	RSL1D1	99	56.250	Propithecus_coquereli
ENSRNOG00000061236	LOC108348298	94	55.675	ENSPVAG00000005014	RSL1D1	94	55.604	Pteropus_vampyrus
ENSRNOG00000061236	LOC108348298	51	47.059	ENSPNYG00000002850	rsl1d1	85	40.401	Pundamilia_nyererei
ENSRNOG00000061236	LOC108348298	80	40.897	ENSPNAG00000011848	rsl1d1	96	40.209	Pygocentrus_nattereri
ENSRNOG00000061236	LOC108348298	93	55.195	ENSRBIG00000030317	RSL1D1	98	55.000	Rhinopithecus_bieti
ENSRNOG00000061236	LOC108348298	94	55.365	ENSRROG00000033658	RSL1D1	98	55.000	Rhinopithecus_roxellana
ENSRNOG00000061236	LOC108348298	97	41.736	ENSSBOG00000029329	-	89	48.196	Saimiri_boliviensis_boliviensis
ENSRNOG00000061236	LOC108348298	90	55.333	ENSSBOG00000035910	-	95	56.263	Saimiri_boliviensis_boliviensis
ENSRNOG00000061236	LOC108348298	94	51.168	ENSSBOG00000028384	-	97	52.743	Saimiri_boliviensis_boliviensis
ENSRNOG00000061236	LOC108348298	52	51.046	ENSSFOG00015011354	rsl1d1	68	51.046	Scleropages_formosus
ENSRNOG00000061236	LOC108348298	50	46.552	ENSSMAG00000007957	rsl1d1	66	46.552	Scophthalmus_maximus
ENSRNOG00000061236	LOC108348298	51	46.444	ENSSDUG00000008447	rsl1d1	78	41.108	Seriola_dumerili
ENSRNOG00000061236	LOC108348298	51	46.025	ENSSLDG00000008293	rsl1d1	84	41.716	Seriola_lalandi_dorsalis
ENSRNOG00000061236	LOC108348298	93	40.685	ENSSPUG00000007525	RSL1D1	99	41.342	Sphenodon_punctatus
ENSRNOG00000061236	LOC108348298	51	47.479	ENSSPAG00000009755	rsl1d1	84	42.433	Stegastes_partitus
ENSRNOG00000061236	LOC108348298	91	56.987	ENSSSCG00000023984	RSL1D1	93	56.277	Sus_scrofa
ENSRNOG00000061236	LOC108348298	53	53.846	ENSTGUG00000005174	RSL1D1	99	53.846	Taeniopygia_guttata
ENSRNOG00000061236	LOC108348298	52	46.473	ENSTRUG00000016970	rsl1d1	68	46.473	Takifugu_rubripes
ENSRNOG00000061236	LOC108348298	82	37.533	ENSTNIG00000012925	rsl1d1	95	37.337	Tetraodon_nigroviridis
ENSRNOG00000061236	LOC108348298	80	48.284	ENSTBEG00000014678	RSL1D1	99	48.284	Tupaia_belangeri
ENSRNOG00000061236	LOC108348298	83	59.548	ENSTTRG00000011629	RSL1D1	83	59.158	Tursiops_truncatus
ENSRNOG00000061236	LOC108348298	91	57.944	ENSUAMG00000004470	RSL1D1	96	55.949	Ursus_americanus
ENSRNOG00000061236	LOC108348298	82	52.691	ENSUMAG00000003994	RSL1D1	97	53.587	Ursus_maritimus
ENSRNOG00000061236	LOC108348298	91	54.079	ENSVVUG00000024962	-	90	53.882	Vulpes_vulpes
ENSRNOG00000061236	LOC108348298	92	56.645	ENSVVUG00000018170	-	93	57.081	Vulpes_vulpes
ENSRNOG00000061236	LOC108348298	78	43.956	ENSXETG00000033365	-	72	43.402	Xenopus_tropicalis
ENSRNOG00000061236	LOC108348298	50	48.276	ENSXMAG00000025111	rsl1d1	66	48.276	Xiphophorus_maculatus