EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000061533 (Gene tree)
Gene ID: -
Gene Symbol: AABR07001926.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 2175 bases
Position: chr1:62314276-62316450
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	1	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	2	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	3	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	4	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	5	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	6	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	7	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	8	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	9	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	10	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	11	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	12	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	13	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	14	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	15	16
ENSRNOP00000071753	zf-C2H2	PF00096.26	3.9e-86	16	16
ENSRNOP00000071753	zf-met	PF12874.7	6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000079171	AABR07001926.3-201	2175	-	ENSRNOP00000071753	725 (aa)	-	A0A0G2K197

Gene Model

Click here to download ENSRNOG00000061533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000061533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000061533	AABR07001926.3	98	51.724	ENSRNOG00000015188	AABR07053681.1	81	51.724
ENSRNOG00000061533	AABR07001926.3	90	46.584	ENSRNOG00000014331	Zfp810	92	46.584
ENSRNOG00000061533	AABR07001926.3	83	34.579	ENSRNOG00000008239	Repin1	84	33.065
ENSRNOG00000061533	AABR07001926.3	98	50.474	ENSRNOG00000032625	AC118165.1	100	51.651
ENSRNOG00000061533	AABR07001926.3	99	50.000	ENSRNOG00000052406	LOC102552527	95	50.000
ENSRNOG00000061533	AABR07001926.3	95	49.867	ENSRNOG00000042777	Zfp28	67	49.403
ENSRNOG00000061533	AABR07001926.3	86	53.333	ENSRNOG00000027923	Mynn	62	53.333
ENSRNOG00000061533	AABR07001926.3	95	37.772	ENSRNOG00000002713	Zfp672	89	37.772
ENSRNOG00000061533	AABR07001926.3	96	48.372	ENSRNOG00000049259	LOC102549842	91	48.372
ENSRNOG00000061533	AABR07001926.3	90	45.777	ENSRNOG00000025937	Zfp26	86	45.777
ENSRNOG00000061533	AABR07001926.3	90	46.890	ENSRNOG00000014712	Zfp39	59	45.740
ENSRNOG00000061533	AABR07001926.3	87	50.413	ENSRNOG00000019059	Zfp1	75	50.413
ENSRNOG00000061533	AABR07001926.3	83	33.333	ENSRNOG00000016279	Zfp865	76	36.735
ENSRNOG00000061533	AABR07001926.3	84	47.566	ENSRNOG00000024056	Zfp17	74	47.566
ENSRNOG00000061533	AABR07001926.3	89	44.643	ENSRNOG00000028628	LOC100911196	85	31.250
ENSRNOG00000061533	AABR07001926.3	84	36.782	ENSRNOG00000014658	Zfp423	99	36.782
ENSRNOG00000061533	AABR07001926.3	86	39.706	ENSRNOG00000013586	Snai3	63	39.706
ENSRNOG00000061533	AABR07001926.3	81	40.426	ENSRNOG00000047699	Snai2	53	40.426
ENSRNOG00000061533	AABR07001926.3	82	37.736	ENSRNOG00000013460	Zfp319	91	34.115
ENSRNOG00000061533	AABR07001926.3	96	48.235	ENSRNOG00000048394	Zfp560	90	48.235
ENSRNOG00000061533	AABR07001926.3	90	39.820	ENSRNOG00000010436	Zbtb17	61	38.770
ENSRNOG00000061533	AABR07001926.3	82	41.071	ENSRNOG00000009594	Snai1	53	41.071
ENSRNOG00000061533	AABR07001926.3	83	50.628	ENSRNOG00000019416	Zfp61	75	48.105
ENSRNOG00000061533	AABR07001926.3	82	45.652	ENSRNOG00000013907	Sall1	60	45.652
ENSRNOG00000061533	AABR07001926.3	90	51.485	ENSRNOG00000003455	Zfp13	66	51.485
ENSRNOG00000061533	AABR07001926.3	90	31.041	ENSRNOG00000055761	Zfp574	99	30.375
ENSRNOG00000061533	AABR07001926.3	82	41.379	ENSRNOG00000016874	Zfp521	97	41.379
ENSRNOG00000061533	AABR07001926.3	88	42.699	ENSRNOG00000016417	Zfp136	88	42.699
ENSRNOG00000061533	AABR07001926.3	90	41.739	ENSRNOG00000007576	Zfp597	71	33.569
ENSRNOG00000061533	AABR07001926.3	86	47.368	ENSRNOG00000030308	Zfp251	72	47.368
ENSRNOG00000061533	AABR07001926.3	90	48.905	ENSRNOG00000029490	Znf768	51	56.061
ENSRNOG00000061533	AABR07001926.3	83	39.645	ENSRNOG00000002042	Gfi1	52	39.645
ENSRNOG00000061533	AABR07001926.3	90	52.941	ENSRNOG00000030517	Zfp879	74	52.941
ENSRNOG00000061533	AABR07001926.3	96	43.402	ENSRNOG00000022431	Zfp867	94	42.391
ENSRNOG00000061533	AABR07001926.3	99	47.181	ENSRNOG00000043341	Zfp51	93	46.164
ENSRNOG00000061533	AABR07001926.3	82	36.333	ENSRNOG00000023679	Prdm5	74	36.333
ENSRNOG00000061533	AABR07001926.3	87	42.746	ENSRNOG00000006684	Zfp317	88	42.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000061533	AABR07001926.3	99	61.165	ENSCGRG00000000411	-	99	55.254	Cricetulus_griseus_crigri
ENSRNOG00000061533	AABR07001926.3	99	57.609	ENSCGRG00000000632	-	100	57.769	Cricetulus_griseus_crigri
ENSRNOG00000061533	AABR07001926.3	99	60.626	ENSMAUG00000009331	-	92	60.626	Mesocricetus_auratus
ENSRNOG00000061533	AABR07001926.3	99	57.440	ENSMOCG00000001762	-	90	57.440	Microtus_ochrogaster
ENSRNOG00000061533	AABR07001926.3	100	83.448	ENSMUSG00000059142	Zfp945	94	83.448	Mus_musculus
ENSRNOG00000061533	AABR07001926.3	99	61.155	ENSMUSG00000069743	Zfp820	90	61.155	Mus_musculus
ENSRNOG00000061533	AABR07001926.3	100	84.690	MGP_PahariEiJ_G0023460	Zfp945	90	84.690	Mus_pahari
ENSRNOG00000061533	AABR07001926.3	100	83.034	MGP_SPRETEiJ_G0022052	Zfp945	94	83.034	Mus_spretus