EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000001726 (Gene tree)
Gene ID: 104662033
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 74766 bases
Position: chrKN295428.1:143752-218517
Accession: 104662033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000000743	ResIII	PF04851.15	3.3e-07	1	1
ENSRROP00000000740	ResIII	PF04851.15	3.4e-07	1	1
ENSRROP00000000729	ResIII	PF04851.15	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000003134	CHD1-203	5073	-	ENSRROP00000000743	1690 (aa)	-	A0A2K6N8Z5
ENSRROT00000003130	CHD1-202	5091	-	ENSRROP00000000740	1696 (aa)	-	A0A2K6N8Y7
ENSRROT00000003099	CHD1-201	8066	XM_010362912	ENSRROP00000000729	1712 (aa)	XP_010361214	A0A2K6N8X4

Gene Model

Click here to download ENSRROG00000001726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000001726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000001726	CHD1	98	55.289	ENSRROG00000041087	-	91	59.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000001726	CHD1	100	99.124	ENSG00000153922	CHD1	100	99.124	Homo_sapiens
ENSRROG00000001726	CHD1	68	82.714	ENSAPOG00000005764	chd1	97	83.058	Acanthochromis_polyacanthus
ENSRROG00000001726	CHD1	89	77.139	ENSAOCG00000023105	chd1	92	78.691	Amphiprion_ocellaris
ENSRROG00000001726	CHD1	89	78.329	ENSAPEG00000013544	chd1	92	79.907	Amphiprion_percula
ENSRROG00000001726	CHD1	72	82.387	ENSAMXG00000010843	chd1	91	83.502	Astyanax_mexicanus
ENSRROG00000001726	CHD1	100	99.533	ENSCATG00000032035	CHD1	100	99.533	Cercocebus_atys
ENSRROG00000001726	CHD1	100	99.591	ENSCSAG00000015339	CHD1	100	99.591	Chlorocebus_sabaeus
ENSRROG00000001726	CHD1	55	88.781	ENSCPBG00000015831	CHD1	99	84.375	Chrysemys_picta_bellii
ENSRROG00000001726	CHD1	100	97.753	ENSCANG00000036916	CHD1	100	97.723	Colobus_angolensis_palliatus
ENSRROG00000001726	CHD1	100	95.508	ENSCGRG00001023943	Chd1	100	95.449	Cricetulus_griseus_chok1gshd
ENSRROG00000001726	CHD1	100	95.508	ENSCGRG00000008652	Chd1	100	95.449	Cricetulus_griseus_crigri
ENSRROG00000001726	CHD1	89	75.718	ENSCSEG00000009553	chd1	92	77.569	Cynoglossus_semilaevis
ENSRROG00000001726	CHD1	92	89.263	ENSEASG00005016110	CHD1	99	97.641	Equus_asinus_asinus
ENSRROG00000001726	CHD1	90	77.893	ENSELUG00000017677	chd1	93	77.778	Esox_lucius
ENSRROG00000001726	CHD1	72	81.306	ENSFHEG00000021164	chd1	89	81.306	Fundulus_heteroclitus
ENSRROG00000001726	CHD1	97	77.494	ENSGMOG00000001537	chd1	96	67.378	Gadus_morhua
ENSRROG00000001726	CHD1	92	89.732	ENSGALG00000031327	-	96	89.923	Gallus_gallus
ENSRROG00000001726	CHD1	83	81.846	ENSGAFG00000019880	chd1	93	81.846	Gambusia_affinis
ENSRROG00000001726	CHD1	100	95.406	ENSGGOG00000011463	CHD1	99	95.468	Gorilla_gorilla
ENSRROG00000001726	CHD1	88	79.178	ENSHCOG00000014222	chd1	91	79.611	Hippocampus_comes
ENSRROG00000001726	CHD1	87	81.648	ENSIPUG00000001369	chd1	95	79.662	Ictalurus_punctatus
ENSRROG00000001726	CHD1	63	95.412	ENSLAFG00000023183	CHD1	99	95.070	Loxodonta_africana
ENSRROG00000001726	CHD1	100	99.533	ENSMFAG00000031226	CHD1	100	99.533	Macaca_fascicularis
ENSRROG00000001726	CHD1	83	99.296	ENSMMUG00000014090	CHD1	99	99.296	Macaca_mulatta
ENSRROG00000001726	CHD1	100	99.533	ENSMNEG00000045073	CHD1	100	99.533	Macaca_nemestrina
ENSRROG00000001726	CHD1	100	95.565	ENSMLEG00000041096	CHD1	99	95.979	Mandrillus_leucophaeus
ENSRROG00000001726	CHD1	70	83.067	ENSMZEG00005010957	chd1	94	80.431	Maylandia_zebra
ENSRROG00000001726	CHD1	100	92.940	ENSMOCG00000019121	Chd1	100	92.999	Microtus_ochrogaster
ENSRROG00000001726	CHD1	80	78.855	ENSMALG00000013317	chd1	95	78.388	Monopterus_albus
ENSRROG00000001726	CHD1	100	94.169	MGP_CAROLIEiJ_G0021099	Chd1	99	96.858	Mus_caroli
ENSRROG00000001726	CHD1	100	94.461	ENSMUSG00000023852	Chd1	99	97.043	Mus_musculus
ENSRROG00000001726	CHD1	100	93.586	MGP_PahariEiJ_G0023414	Chd1	99	97.045	Mus_pahari
ENSRROG00000001726	CHD1	87	77.206	ENSNBRG00000006860	chd1	93	76.432	Neolamprologus_brichardi
ENSRROG00000001726	CHD1	100	96.485	ENSNLEG00000014493	CHD1	99	96.485	Nomascus_leucogenys
ENSRROG00000001726	CHD1	100	92.522	ENSOANG00000004891	CHD1	100	93.982	Ornithorhynchus_anatinus
ENSRROG00000001726	CHD1	60	77.712	ENSORLG00015016725	chd1	93	77.413	Oryzias_latipes_hsok
ENSRROG00000001726	CHD1	100	97.535	ENSPPAG00000043367	CHD1	99	97.535	Pan_paniscus
ENSRROG00000001726	CHD1	100	98.949	ENSPTRG00000017103	CHD1	100	98.949	Pan_troglodytes
ENSRROG00000001726	CHD1	100	99.533	ENSPANG00000006387	CHD1	100	99.533	Papio_anubis
ENSRROG00000001726	CHD1	91	79.027	ENSPKIG00000024719	chd1	94	79.093	Paramormyrops_kingsleyae
ENSRROG00000001726	CHD1	73	81.395	ENSPMGG00000005785	chd1	93	81.476	Periophthalmus_magnuspinnatus
ENSRROG00000001726	CHD1	100	95.624	ENSPEMG00000015939	Chd1	100	95.566	Peromyscus_maniculatus_bairdii
ENSRROG00000001726	CHD1	50	77.672	ENSPLAG00000006473	-	85	78.055	Poecilia_latipinna
ENSRROG00000001726	CHD1	97	74.834	ENSPREG00000004209	chd1	97	75.015	Poecilia_reticulata
ENSRROG00000001726	CHD1	83	95.707	ENSRNOG00000014434	Chd1	99	95.707	Rattus_norvegicus
ENSRROG00000001726	CHD1	100	97.289	ENSRBIG00000044325	CHD1	100	97.255	Rhinopithecus_bieti
ENSRROG00000001726	CHD1	72	81.848	ENSSFOG00015007161	chd1	90	82.846	Scleropages_formosus
ENSRROG00000001726	CHD1	80	78.897	ENSSDUG00000018314	chd1	94	78.781	Seriola_dumerili
ENSRROG00000001726	CHD1	52	83.941	ENSSLDG00000017244	chd1	84	86.019	Seriola_lalandi_dorsalis
ENSRROG00000001726	CHD1	80	80.059	ENSSPAG00000007024	chd1	95	79.133	Stegastes_partitus
ENSRROG00000001726	CHD1	86	97.804	ENSSSCG00000014177	CHD1	100	97.704	Sus_scrofa
ENSRROG00000001726	CHD1	91	75.306	ENSTRUG00000010282	chd1	96	73.096	Takifugu_rubripes
ENSRROG00000001726	CHD1	72	77.514	ENSTNIG00000007101	chd1	95	78.077	Tetraodon_nigroviridis
ENSRROG00000001726	CHD1	97	72.804	ENSXCOG00000017184	chd1	97	72.888	Xiphophorus_couchianus
ENSRROG00000001726	CHD1	77	78.473	ENSXMAG00000014538	chd1	95	78.806	Xiphophorus_maculatus