EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000006040 (Gene tree)
Gene ID: 104679250
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 2736 bases
Position: chrKN298806.1:3577045-3579780
Accession: 104679250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000001486	RNA_ligase	PF09414.10	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000006726	LIG4-201	2736	XM_010384753	ENSRROP00000001486	911 (aa)	XP_010383055	A0A2K6NB42

Gene Model

Click here to download ENSRROG00000006040's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000006040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000006040	LIG4	100	96.707	ENSG00000174405	LIG4	100	96.801	Homo_sapiens
ENSRROG00000006040	LIG4	99	64.868	ENSAPOG00000000866	lig4	99	65.088	Acanthochromis_polyacanthus
ENSRROG00000006040	LIG4	100	88.255	ENSAMEG00000019685	LIG4	99	88.255	Ailuropoda_melanoleuca
ENSRROG00000006040	LIG4	99	66.186	ENSACIG00000018309	lig4	98	66.408	Amphilophus_citrinellus
ENSRROG00000006040	LIG4	99	64.978	ENSAOCG00000011768	lig4	99	65.198	Amphiprion_ocellaris
ENSRROG00000006040	LIG4	99	65.088	ENSAPEG00000017815	lig4	99	65.308	Amphiprion_percula
ENSRROG00000006040	LIG4	99	65.275	ENSATEG00000005583	lig4	99	65.385	Anabas_testudineus
ENSRROG00000006040	LIG4	97	74.659	ENSAPLG00000001673	LIG4	99	74.659	Anas_platyrhynchos
ENSRROG00000006040	LIG4	99	75.441	ENSACAG00000014566	LIG4	99	75.441	Anolis_carolinensis
ENSRROG00000006040	LIG4	100	95.280	ENSANAG00000012446	LIG4	100	95.280	Aotus_nancymaae
ENSRROG00000006040	LIG4	99	65.521	ENSACLG00000027051	lig4	98	65.521	Astatotilapia_calliptera
ENSRROG00000006040	LIG4	99	64.420	ENSAMXG00000008192	lig4	93	64.420	Astyanax_mexicanus
ENSRROG00000006040	LIG4	100	88.035	ENSBTAG00000015868	LIG4	100	88.035	Bos_taurus
ENSRROG00000006040	LIG4	100	94.621	ENSCJAG00000014689	LIG4	100	94.621	Callithrix_jacchus
ENSRROG00000006040	LIG4	100	89.901	ENSCAFG00000006031	LIG4	100	89.901	Canis_familiaris
ENSRROG00000006040	LIG4	100	89.901	ENSCAFG00020021230	LIG4	100	89.901	Canis_lupus_dingo
ENSRROG00000006040	LIG4	100	87.816	ENSCHIG00000001019	LIG4	100	87.816	Capra_hircus
ENSRROG00000006040	LIG4	99	87.486	ENSCAPG00000006284	LIG4	99	87.486	Cavia_aperea
ENSRROG00000006040	LIG4	100	87.377	ENSCPOG00000014266	LIG4	100	87.377	Cavia_porcellus
ENSRROG00000006040	LIG4	100	94.402	ENSCCAG00000019971	LIG4	100	94.402	Cebus_capucinus
ENSRROG00000006040	LIG4	100	98.463	ENSCATG00000021075	LIG4	100	98.463	Cercocebus_atys
ENSRROG00000006040	LIG4	100	88.913	ENSCLAG00000003376	LIG4	100	88.913	Chinchilla_lanigera
ENSRROG00000006040	LIG4	100	98.573	ENSCSAG00000000211	LIG4	100	98.573	Chlorocebus_sabaeus
ENSRROG00000006040	LIG4	99	79.139	ENSCPBG00000023291	LIG4	100	78.649	Chrysemys_picta_bellii
ENSRROG00000006040	LIG4	68	44.992	ENSCING00000009536	-	95	44.992	Ciona_intestinalis
ENSRROG00000006040	LIG4	83	45.072	ENSCSAVG00000010336	-	98	45.072	Ciona_savignyi
ENSRROG00000006040	LIG4	100	99.012	ENSCANG00000005805	LIG4	100	99.012	Colobus_angolensis_palliatus
ENSRROG00000006040	LIG4	100	86.623	ENSCGRG00001012072	Lig4	100	86.623	Cricetulus_griseus_chok1gshd
ENSRROG00000006040	LIG4	100	86.623	ENSCGRG00000013417	Lig4	100	86.623	Cricetulus_griseus_crigri
ENSRROG00000006040	LIG4	97	66.704	ENSCSEG00000013905	lig4	95	66.704	Cynoglossus_semilaevis
ENSRROG00000006040	LIG4	99	65.714	ENSCVAG00000007896	lig4	99	65.714	Cyprinodon_variegatus
ENSRROG00000006040	LIG4	99	64.341	ENSDARG00000060620	lig4	98	64.341	Danio_rerio
ENSRROG00000006040	LIG4	100	89.474	ENSDNOG00000000513	LIG4	100	89.474	Dasypus_novemcinctus
ENSRROG00000006040	LIG4	100	88.694	ENSDORG00000027303	Lig4	100	88.694	Dipodomys_ordii
ENSRROG00000006040	LIG4	89	31.111	FBgn0030506	Lig4	91	31.111	Drosophila_melanogaster
ENSRROG00000006040	LIG4	99	84.368	ENSETEG00000015563	LIG4	100	84.701	Echinops_telfairi
ENSRROG00000006040	LIG4	99	43.638	ENSEBUG00000014243	lig4	99	43.638	Eptatretus_burgeri
ENSRROG00000006040	LIG4	100	90.889	ENSEASG00005022073	LIG4	100	90.889	Equus_asinus_asinus
ENSRROG00000006040	LIG4	100	90.231	ENSECAG00000003257	LIG4	100	90.231	Equus_caballus
ENSRROG00000006040	LIG4	99	66.262	ENSELUG00000006787	lig4	99	66.373	Esox_lucius
ENSRROG00000006040	LIG4	100	88.804	ENSFCAG00000031985	LIG4	100	88.804	Felis_catus
ENSRROG00000006040	LIG4	89	75.154	ENSFALG00000004214	LIG4	98	75.154	Ficedula_albicollis
ENSRROG00000006040	LIG4	100	89.572	ENSFDAG00000008973	LIG4	100	89.572	Fukomys_damarensis
ENSRROG00000006040	LIG4	99	65.006	ENSFHEG00000007398	lig4	89	65.006	Fundulus_heteroclitus
ENSRROG00000006040	LIG4	85	64.570	ENSGMOG00000012843	lig4	99	64.570	Gadus_morhua
ENSRROG00000006040	LIG4	100	74.454	ENSGALG00000016854	LIG4	100	74.454	Gallus_gallus
ENSRROG00000006040	LIG4	99	65.367	ENSGAFG00000019779	lig4	95	65.275	Gambusia_affinis
ENSRROG00000006040	LIG4	99	63.234	ENSGACG00000014135	lig4	99	63.344	Gasterosteus_aculeatus
ENSRROG00000006040	LIG4	100	97.036	ENSGGOG00000027771	LIG4	100	97.036	Gorilla_gorilla
ENSRROG00000006040	LIG4	99	65.299	ENSHBUG00000006245	lig4	98	65.299	Haplochromis_burtoni
ENSRROG00000006040	LIG4	100	89.682	ENSHGLG00000000718	LIG4	100	89.682	Heterocephalus_glaber_female
ENSRROG00000006040	LIG4	100	89.682	ENSHGLG00100003265	LIG4	100	89.682	Heterocephalus_glaber_male
ENSRROG00000006040	LIG4	99	64.286	ENSHCOG00000012010	lig4	99	64.286	Hippocampus_comes
ENSRROG00000006040	LIG4	100	64.558	ENSIPUG00000013748	lig4	100	64.558	Ictalurus_punctatus
ENSRROG00000006040	LIG4	100	89.462	ENSSTOG00000024303	LIG4	100	89.462	Ictidomys_tridecemlineatus
ENSRROG00000006040	LIG4	100	87.706	ENSJJAG00000006750	Lig4	100	87.706	Jaculus_jaculus
ENSRROG00000006040	LIG4	99	65.116	ENSKMAG00000001149	lig4	99	65.116	Kryptolebias_marmoratus
ENSRROG00000006040	LIG4	91	66.226	ENSLBEG00000014578	lig4	100	66.466	Labrus_bergylta
ENSRROG00000006040	LIG4	99	72.013	ENSLACG00000003282	LIG4	99	72.013	Latimeria_chalumnae
ENSRROG00000006040	LIG4	99	70.000	ENSLOCG00000008901	lig4	98	70.000	Lepisosteus_oculatus
ENSRROG00000006040	LIG4	100	87.733	ENSLAFG00000031152	LIG4	100	87.733	Loxodonta_africana
ENSRROG00000006040	LIG4	100	98.683	ENSMFAG00000037235	LIG4	100	98.683	Macaca_fascicularis
ENSRROG00000006040	LIG4	100	98.683	ENSMMUG00000008874	LIG4	100	98.683	Macaca_mulatta
ENSRROG00000006040	LIG4	100	98.683	ENSMNEG00000023575	LIG4	100	98.683	Macaca_nemestrina
ENSRROG00000006040	LIG4	100	98.353	ENSMLEG00000026720	LIG4	100	98.353	Mandrillus_leucophaeus
ENSRROG00000006040	LIG4	99	65.824	ENSMAMG00000008472	lig4	99	66.044	Mastacembelus_armatus
ENSRROG00000006040	LIG4	99	65.521	ENSMZEG00005001855	lig4	98	65.521	Maylandia_zebra
ENSRROG00000006040	LIG4	100	74.891	ENSMGAG00000015532	LIG4	100	74.891	Meleagris_gallopavo
ENSRROG00000006040	LIG4	100	84.523	ENSMOCG00000019000	Lig4	100	84.523	Microtus_ochrogaster
ENSRROG00000006040	LIG4	99	65.338	ENSMMOG00000004390	lig4	99	65.338	Mola_mola
ENSRROG00000006040	LIG4	100	83.425	ENSMODG00000025064	LIG4	100	83.882	Monodelphis_domestica
ENSRROG00000006040	LIG4	99	65.559	ENSMALG00000008555	lig4	99	65.559	Monopterus_albus
ENSRROG00000006040	LIG4	100	86.279	MGP_CAROLIEiJ_G0030809	Lig4	100	86.279	Mus_caroli
ENSRROG00000006040	LIG4	100	86.279	ENSMUSG00000049717	Lig4	100	86.279	Mus_musculus
ENSRROG00000006040	LIG4	100	86.169	MGP_PahariEiJ_G0021270	Lig4	100	86.169	Mus_pahari
ENSRROG00000006040	LIG4	100	86.279	MGP_SPRETEiJ_G0031917	Lig4	100	86.279	Mus_spretus
ENSRROG00000006040	LIG4	100	87.816	ENSMPUG00000018675	LIG4	100	87.816	Mustela_putorius_furo
ENSRROG00000006040	LIG4	100	90.340	ENSMLUG00000001267	LIG4	100	90.340	Myotis_lucifugus
ENSRROG00000006040	LIG4	100	86.828	ENSNGAG00000013258	Lig4	100	86.828	Nannospalax_galili
ENSRROG00000006040	LIG4	99	65.567	ENSNBRG00000021252	lig4	99	65.567	Neolamprologus_brichardi
ENSRROG00000006040	LIG4	100	96.048	ENSNLEG00000007888	LIG4	100	96.048	Nomascus_leucogenys
ENSRROG00000006040	LIG4	100	87.486	ENSOPRG00000005765	LIG4	100	87.486	Ochotona_princeps
ENSRROG00000006040	LIG4	100	87.596	ENSODEG00000019683	LIG4	100	87.596	Octodon_degus
ENSRROG00000006040	LIG4	99	65.338	ENSONIG00000011969	lig4	97	65.559	Oreochromis_niloticus
ENSRROG00000006040	LIG4	100	91.109	ENSOCUG00000015734	LIG4	100	91.109	Oryctolagus_cuniculus
ENSRROG00000006040	LIG4	99	64.176	ENSORLG00000004041	lig4	99	64.176	Oryzias_latipes
ENSRROG00000006040	LIG4	99	64.615	ENSORLG00020019607	lig4	99	64.615	Oryzias_latipes_hni
ENSRROG00000006040	LIG4	99	64.286	ENSORLG00015017754	lig4	99	64.286	Oryzias_latipes_hsok
ENSRROG00000006040	LIG4	75	69.706	ENSOMEG00000003459	lig4	99	69.706	Oryzias_melastigma
ENSRROG00000006040	LIG4	100	91.667	ENSOGAG00000032120	LIG4	99	91.667	Otolemur_garnettii
ENSRROG00000006040	LIG4	82	89.530	ENSOARG00000005590	LIG4	98	89.530	Ovis_aries
ENSRROG00000006040	LIG4	100	96.268	ENSPPAG00000032998	LIG4	100	96.268	Pan_paniscus
ENSRROG00000006040	LIG4	100	89.133	ENSPPRG00000017804	LIG4	100	89.133	Panthera_pardus
ENSRROG00000006040	LIG4	100	89.023	ENSPTIG00000010051	LIG4	100	89.023	Panthera_tigris_altaica
ENSRROG00000006040	LIG4	100	96.378	ENSPTRG00000006025	LIG4	100	96.378	Pan_troglodytes
ENSRROG00000006040	LIG4	100	98.573	ENSPANG00000007562	LIG4	100	98.573	Papio_anubis
ENSRROG00000006040	LIG4	99	66.044	ENSPKIG00000011645	lig4	98	66.044	Paramormyrops_kingsleyae
ENSRROG00000006040	LIG4	100	78.603	ENSPSIG00000001504	LIG4	100	78.603	Pelodiscus_sinensis
ENSRROG00000006040	LIG4	99	63.778	ENSPMGG00000013486	lig4	99	63.337	Periophthalmus_magnuspinnatus
ENSRROG00000006040	LIG4	100	86.623	ENSPEMG00000000076	Lig4	100	86.623	Peromyscus_maniculatus_bairdii
ENSRROG00000006040	LIG4	100	83.443	ENSPCIG00000021882	LIG4	100	83.443	Phascolarctos_cinereus
ENSRROG00000006040	LIG4	99	65.517	ENSPFOG00000000797	lig4	99	65.275	Poecilia_formosa
ENSRROG00000006040	LIG4	99	65.406	ENSPLAG00000001196	lig4	99	65.165	Poecilia_latipinna
ENSRROG00000006040	LIG4	99	65.517	ENSPMEG00000021353	lig4	99	65.385	Poecilia_mexicana
ENSRROG00000006040	LIG4	99	65.295	ENSPREG00000007323	lig4	99	65.055	Poecilia_reticulata
ENSRROG00000006040	LIG4	100	96.926	ENSPPYG00000005540	LIG4	100	96.926	Pongo_abelii
ENSRROG00000006040	LIG4	100	90.121	ENSPVAG00000016403	LIG4	100	90.121	Pteropus_vampyrus
ENSRROG00000006040	LIG4	99	65.410	ENSPNYG00000009660	lig4	98	65.410	Pundamilia_nyererei
ENSRROG00000006040	LIG4	100	64.622	ENSPNAG00000028056	lig4	100	64.622	Pygocentrus_nattereri
ENSRROG00000006040	LIG4	100	64.622	ENSPNAG00000028069	LIG4	100	64.622	Pygocentrus_nattereri
ENSRROG00000006040	LIG4	100	85.510	ENSRNOG00000014605	Lig4	100	85.510	Rattus_norvegicus
ENSRROG00000006040	LIG4	100	98.573	ENSRBIG00000039962	LIG4	100	98.573	Rhinopithecus_bieti
ENSRROG00000006040	LIG4	100	94.402	ENSSBOG00000019029	LIG4	100	94.402	Saimiri_boliviensis_boliviensis
ENSRROG00000006040	LIG4	100	79.912	ENSSHAG00000009525	LIG4	100	80.482	Sarcophilus_harrisii
ENSRROG00000006040	LIG4	100	65.393	ENSSFOG00015012835	lig4	100	65.393	Scleropages_formosus
ENSRROG00000006040	LIG4	99	63.344	ENSSMAG00000011267	lig4	99	63.344	Scophthalmus_maximus
ENSRROG00000006040	LIG4	99	66.630	ENSSDUG00000010343	lig4	98	66.630	Seriola_dumerili
ENSRROG00000006040	LIG4	99	64.784	ENSSLDG00000003239	lig4	99	64.784	Seriola_lalandi_dorsalis
ENSRROG00000006040	LIG4	100	82.823	ENSSARG00000006573	LIG4	100	82.823	Sorex_araneus
ENSRROG00000006040	LIG4	93	77.607	ENSSPUG00000002444	LIG4	100	77.607	Sphenodon_punctatus
ENSRROG00000006040	LIG4	99	65.275	ENSSPAG00000001609	lig4	99	65.275	Stegastes_partitus
ENSRROG00000006040	LIG4	100	87.925	ENSSSCG00000009540	LIG4	100	87.925	Sus_scrofa
ENSRROG00000006040	LIG4	99	74.176	ENSTGUG00000010795	LIG4	100	74.176	Taeniopygia_guttata
ENSRROG00000006040	LIG4	99	65.604	ENSTRUG00000009984	lig4	99	65.604	Takifugu_rubripes
ENSRROG00000006040	LIG4	99	65.338	ENSTNIG00000010348	lig4	99	65.559	Tetraodon_nigroviridis
ENSRROG00000006040	LIG4	100	90.450	ENSTBEG00000017741	LIG4	100	90.450	Tupaia_belangeri
ENSRROG00000006040	LIG4	100	88.913	ENSTTRG00000012660	LIG4	100	88.913	Tursiops_truncatus
ENSRROG00000006040	LIG4	100	88.364	ENSUAMG00000003773	LIG4	100	88.364	Ursus_americanus
ENSRROG00000006040	LIG4	99	71.696	ENSXETG00000002654	lig4	99	71.696	Xenopus_tropicalis
ENSRROG00000006040	LIG4	99	65.184	ENSXCOG00000017401	lig4	99	64.725	Xiphophorus_couchianus
ENSRROG00000006040	LIG4	99	65.556	ENSXMAG00000015142	lig4	99	65.093	Xiphophorus_maculatus