EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000012334 (Gene tree)
Gene ID: 104679888
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 45596 bases
Position: chrKN298862.1:1829578-1875173
Accession: 104679888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000003124	POP1	PF06978.11	3.7e-38	1	2
ENSRROP00000003124	POP1	PF06978.11	3.7e-38	2	2
ENSRROP00000003116	POP1	PF06978.11	4e-38	1	2
ENSRROP00000003116	POP1	PF06978.11	4e-38	2	2
ENSRROP00000003124	POPLD	PF08170.12	3.1e-27	1	1
ENSRROP00000003116	POPLD	PF08170.12	3.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000013812	POP1-201	4730	XM_010385621	ENSRROP00000003116	1024 (aa)	XP_010383923	A0A2K6NFT1
ENSRROT00000013843	POP1-202	2991	-	ENSRROP00000003124	996 (aa)	-	A0A2K6NFR7

Gene Model

Click here to download ENSRROG00000012334's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03008	Ribosome biogenesis in eukaryotes	KEGG
rro03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000012334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000012334	POP1	100	96.875	ENSG00000104356	POP1	100	98.907	Homo_sapiens
ENSRROG00000012334	POP1	100	47.981	ENSAPOG00000008198	pop1	100	47.887	Acanthochromis_polyacanthus
ENSRROG00000012334	POP1	100	80.000	ENSAMEG00000000556	POP1	100	80.000	Ailuropoda_melanoleuca
ENSRROG00000012334	POP1	90	49.469	ENSACIG00000004169	POP1	100	46.411	Amphilophus_citrinellus
ENSRROG00000012334	POP1	100	47.264	ENSAOCG00000010991	pop1	100	47.075	Amphiprion_ocellaris
ENSRROG00000012334	POP1	91	47.580	ENSAPEG00000007607	pop1	96	47.835	Amphiprion_percula
ENSRROG00000012334	POP1	100	46.147	ENSATEG00000024814	POP1	100	46.147	Anabas_testudineus
ENSRROG00000012334	POP1	92	62.854	ENSAPLG00000014418	POP1	100	62.959	Anas_platyrhynchos
ENSRROG00000012334	POP1	100	56.647	ENSACAG00000016083	POP1	100	56.530	Anolis_carolinensis
ENSRROG00000012334	POP1	93	94.065	ENSANAG00000026360	POP1	100	94.065	Aotus_nancymaae
ENSRROG00000012334	POP1	93	53.270	ENSACLG00000010951	pop1	100	47.408	Astatotilapia_calliptera
ENSRROG00000012334	POP1	100	45.630	ENSAMXG00000014483	POP1	100	45.672	Astyanax_mexicanus
ENSRROG00000012334	POP1	100	80.859	ENSBTAG00000012596	POP1	100	80.859	Bos_taurus
ENSRROG00000012334	POP1	100	92.480	ENSCJAG00000015567	POP1	100	92.480	Callithrix_jacchus
ENSRROG00000012334	POP1	100	80.664	ENSCAFG00000000469	POP1	100	80.664	Canis_familiaris
ENSRROG00000012334	POP1	100	81.836	ENSCAFG00020026765	POP1	100	81.836	Canis_lupus_dingo
ENSRROG00000012334	POP1	100	81.073	ENSCHIG00000017066	POP1	100	81.073	Capra_hircus
ENSRROG00000012334	POP1	100	85.840	ENSTSYG00000003097	POP1	100	85.840	Carlito_syrichta
ENSRROG00000012334	POP1	100	77.551	ENSCAPG00000007251	POP1	100	77.551	Cavia_aperea
ENSRROG00000012334	POP1	100	80.371	ENSCPOG00000002901	POP1	100	80.371	Cavia_porcellus
ENSRROG00000012334	POP1	100	92.578	ENSCCAG00000018939	POP1	100	92.578	Cebus_capucinus
ENSRROG00000012334	POP1	100	98.145	ENSCATG00000040916	POP1	100	98.145	Cercocebus_atys
ENSRROG00000012334	POP1	100	81.836	ENSCLAG00000007208	POP1	97	81.836	Chinchilla_lanigera
ENSRROG00000012334	POP1	90	97.289	ENSCSAG00000012340	POP1	99	97.289	Chlorocebus_sabaeus
ENSRROG00000012334	POP1	95	79.508	ENSCHOG00000011432	POP1	100	79.508	Choloepus_hoffmanni
ENSRROG00000012334	POP1	100	65.310	ENSCPBG00000006373	POP1	100	65.310	Chrysemys_picta_bellii
ENSRROG00000012334	POP1	82	38.132	ENSCING00000008323	-	90	36.396	Ciona_intestinalis
ENSRROG00000012334	POP1	100	98.633	ENSCANG00000001647	POP1	100	98.633	Colobus_angolensis_palliatus
ENSRROG00000012334	POP1	100	76.780	ENSCGRG00001017308	Pop1	100	76.780	Cricetulus_griseus_chok1gshd
ENSRROG00000012334	POP1	100	71.220	ENSCGRG00000010824	Pop1	100	71.220	Cricetulus_griseus_crigri
ENSRROG00000012334	POP1	100	45.644	ENSCSEG00000008737	POP1	100	45.928	Cynoglossus_semilaevis
ENSRROG00000012334	POP1	100	47.533	ENSCVAG00000022248	pop1	100	47.533	Cyprinodon_variegatus
ENSRROG00000012334	POP1	100	77.757	ENSDNOG00000019974	POP1	100	77.757	Dasypus_novemcinctus
ENSRROG00000012334	POP1	100	72.656	ENSDORG00000015384	Pop1	100	72.070	Dipodomys_ordii
ENSRROG00000012334	POP1	61	32.753	FBgn0026702	l(1)G0045	78	30.593	Drosophila_melanogaster
ENSRROG00000012334	POP1	89	71.228	ENSETEG00000007839	POP1	88	71.228	Echinops_telfairi
ENSRROG00000012334	POP1	100	83.301	ENSEASG00005003189	POP1	98	83.301	Equus_asinus_asinus
ENSRROG00000012334	POP1	100	83.203	ENSECAG00000024236	POP1	100	83.203	Equus_caballus
ENSRROG00000012334	POP1	69	80.000	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSRROG00000012334	POP1	100	47.660	ENSELUG00000003526	pop1	100	47.660	Esox_lucius
ENSRROG00000012334	POP1	100	83.594	ENSFCAG00000002168	POP1	100	83.594	Felis_catus
ENSRROG00000012334	POP1	100	60.116	ENSFALG00000005711	POP1	100	60.251	Ficedula_albicollis
ENSRROG00000012334	POP1	100	82.422	ENSFDAG00000017068	POP1	100	82.422	Fukomys_damarensis
ENSRROG00000012334	POP1	91	51.511	ENSFHEG00000019518	pop1	100	46.323	Fundulus_heteroclitus
ENSRROG00000012334	POP1	93	46.091	ENSGMOG00000000659	POP1	98	46.091	Gadus_morhua
ENSRROG00000012334	POP1	100	47.546	ENSGAFG00000019770	POP1	100	47.546	Gambusia_affinis
ENSRROG00000012334	POP1	100	46.425	ENSGACG00000003499	pop1	100	46.425	Gasterosteus_aculeatus
ENSRROG00000012334	POP1	100	64.093	ENSGAGG00000011737	POP1	98	64.286	Gopherus_agassizii
ENSRROG00000012334	POP1	100	96.777	ENSGGOG00000003176	POP1	100	96.777	Gorilla_gorilla
ENSRROG00000012334	POP1	100	47.502	ENSHBUG00000021583	pop1	98	52.925	Haplochromis_burtoni
ENSRROG00000012334	POP1	100	81.738	ENSHGLG00000006029	POP1	100	81.738	Heterocephalus_glaber_female
ENSRROG00000012334	POP1	100	81.738	ENSHGLG00100016879	POP1	100	81.738	Heterocephalus_glaber_male
ENSRROG00000012334	POP1	90	49.414	ENSHCOG00000013888	pop1	96	49.467	Hippocampus_comes
ENSRROG00000012334	POP1	100	45.471	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSRROG00000012334	POP1	100	83.105	ENSSTOG00000011455	POP1	97	83.105	Ictidomys_tridecemlineatus
ENSRROG00000012334	POP1	100	79.005	ENSJJAG00000013325	Pop1	100	79.005	Jaculus_jaculus
ENSRROG00000012334	POP1	100	46.398	ENSKMAG00000001346	POP1	100	46.494	Kryptolebias_marmoratus
ENSRROG00000012334	POP1	89	47.629	ENSLBEG00000024457	POP1	100	45.053	Labrus_bergylta
ENSRROG00000012334	POP1	93	56.112	ENSLACG00000012498	POP1	99	55.500	Latimeria_chalumnae
ENSRROG00000012334	POP1	100	51.625	ENSLOCG00000009817	POP1	100	51.820	Lepisosteus_oculatus
ENSRROG00000012334	POP1	100	82.879	ENSLAFG00000010770	POP1	100	82.879	Loxodonta_africana
ENSRROG00000012334	POP1	100	98.047	ENSMFAG00000000347	POP1	100	98.047	Macaca_fascicularis
ENSRROG00000012334	POP1	100	97.559	ENSMNEG00000036870	POP1	100	97.559	Macaca_nemestrina
ENSRROG00000012334	POP1	100	97.949	ENSMLEG00000034986	POP1	100	97.949	Mandrillus_leucophaeus
ENSRROG00000012334	POP1	100	46.648	ENSMAMG00000004040	pop1	100	46.875	Mastacembelus_armatus
ENSRROG00000012334	POP1	100	47.507	ENSMZEG00005025448	pop1	100	47.408	Maylandia_zebra
ENSRROG00000012334	POP1	100	58.025	ENSMGAG00000012167	POP1	100	58.657	Meleagris_gallopavo
ENSRROG00000012334	POP1	100	76.488	ENSMAUG00000017537	Pop1	100	76.488	Mesocricetus_auratus
ENSRROG00000012334	POP1	100	89.019	ENSMICG00000004361	POP1	100	87.012	Microcebus_murinus
ENSRROG00000012334	POP1	100	75.293	ENSMOCG00000006356	Pop1	100	76.074	Microtus_ochrogaster
ENSRROG00000012334	POP1	93	47.361	ENSMMOG00000018242	pop1	98	47.361	Mola_mola
ENSRROG00000012334	POP1	100	69.797	ENSMODG00000006561	POP1	100	69.342	Monodelphis_domestica
ENSRROG00000012334	POP1	93	51.482	ENSMALG00000012621	POP1	100	47.159	Monopterus_albus
ENSRROG00000012334	POP1	100	76.367	MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	Mus_caroli
ENSRROG00000012334	POP1	100	76.758	ENSMUSG00000022325	Pop1	100	76.758	Mus_musculus
ENSRROG00000012334	POP1	100	76.953	MGP_PahariEiJ_G0019735	Pop1	100	76.953	Mus_pahari
ENSRROG00000012334	POP1	100	76.270	MGP_SPRETEiJ_G0020622	Pop1	100	76.270	Mus_spretus
ENSRROG00000012334	POP1	100	81.809	ENSMPUG00000015250	POP1	100	81.712	Mustela_putorius_furo
ENSRROG00000012334	POP1	100	77.778	ENSMLUG00000010204	POP1	100	77.875	Myotis_lucifugus
ENSRROG00000012334	POP1	100	81.641	ENSNGAG00000001582	Pop1	100	81.641	Nannospalax_galili
ENSRROG00000012334	POP1	82	55.372	ENSNBRG00000002356	pop1	93	55.519	Neolamprologus_brichardi
ENSRROG00000012334	POP1	100	95.996	ENSNLEG00000002541	POP1	100	95.996	Nomascus_leucogenys
ENSRROG00000012334	POP1	90	72.046	ENSMEUG00000003118	POP1	92	72.046	Notamacropus_eugenii
ENSRROG00000012334	POP1	100	79.065	ENSOPRG00000007667	POP1	100	78.870	Ochotona_princeps
ENSRROG00000012334	POP1	100	80.019	ENSODEG00000003984	POP1	100	80.019	Octodon_degus
ENSRROG00000012334	POP1	100	48.289	ENSONIG00000016445	pop1	100	48.289	Oreochromis_niloticus
ENSRROG00000012334	POP1	59	70.122	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSRROG00000012334	POP1	100	81.730	ENSOCUG00000017400	POP1	100	81.730	Oryctolagus_cuniculus
ENSRROG00000012334	POP1	100	47.172	ENSORLG00000002839	pop1	100	47.839	Oryzias_latipes
ENSRROG00000012334	POP1	90	49.416	ENSORLG00020022450	POP1	96	49.947	Oryzias_latipes_hni
ENSRROG00000012334	POP1	92	50.052	ENSORLG00015012746	POP1	100	48.031	Oryzias_latipes_hsok
ENSRROG00000012334	POP1	100	47.201	ENSOMEG00000006915	pop1	99	47.531	Oryzias_melastigma
ENSRROG00000012334	POP1	100	83.984	ENSOGAG00000001466	POP1	100	83.984	Otolemur_garnettii
ENSRROG00000012334	POP1	100	97.070	ENSPPAG00000018410	POP1	100	97.070	Pan_paniscus
ENSRROG00000012334	POP1	100	83.512	ENSPPRG00000005002	POP1	100	83.512	Panthera_pardus
ENSRROG00000012334	POP1	100	83.902	ENSPTIG00000016527	POP1	100	83.902	Panthera_tigris_altaica
ENSRROG00000012334	POP1	100	96.973	ENSPTRG00000020458	POP1	100	96.973	Pan_troglodytes
ENSRROG00000012334	POP1	100	97.754	ENSPANG00000009704	POP1	100	97.754	Papio_anubis
ENSRROG00000012334	POP1	100	49.042	ENSPKIG00000016325	POP1	100	49.042	Paramormyrops_kingsleyae
ENSRROG00000012334	POP1	100	63.240	ENSPSIG00000012343	POP1	100	63.240	Pelodiscus_sinensis
ENSRROG00000012334	POP1	90	49.246	ENSPMGG00000022253	POP1	95	49.305	Periophthalmus_magnuspinnatus
ENSRROG00000012334	POP1	99	75.598	ENSPEMG00000023633	Pop1	100	75.598	Peromyscus_maniculatus_bairdii
ENSRROG00000012334	POP1	90	43.538	ENSPMAG00000003209	POP1	100	43.432	Petromyzon_marinus
ENSRROG00000012334	POP1	100	68.624	ENSPCIG00000012216	POP1	100	68.624	Phascolarctos_cinereus
ENSRROG00000012334	POP1	100	49.040	ENSPFOG00000012490	POP1	100	49.040	Poecilia_formosa
ENSRROG00000012334	POP1	100	48.895	ENSPLAG00000004646	POP1	100	48.991	Poecilia_latipinna
ENSRROG00000012334	POP1	100	49.138	ENSPMEG00000019592	POP1	100	49.138	Poecilia_mexicana
ENSRROG00000012334	POP1	100	48.752	ENSPREG00000020951	POP1	100	48.752	Poecilia_reticulata
ENSRROG00000012334	POP1	100	96.289	ENSPPYG00000018777	POP1	100	96.289	Pongo_abelii
ENSRROG00000012334	POP1	100	76.098	ENSPCAG00000016662	POP1	100	75.707	Procavia_capensis
ENSRROG00000012334	POP1	100	87.305	ENSPCOG00000019420	POP1	100	87.305	Propithecus_coquereli
ENSRROG00000012334	POP1	100	81.854	ENSPVAG00000014468	POP1	100	81.854	Pteropus_vampyrus
ENSRROG00000012334	POP1	89	48.394	ENSPNYG00000004476	pop1	95	48.565	Pundamilia_nyererei
ENSRROG00000012334	POP1	100	46.210	ENSPNAG00000000265	pop1	100	44.099	Pygocentrus_nattereri
ENSRROG00000012334	POP1	100	77.441	ENSRNOG00000005243	Pop1	100	77.441	Rattus_norvegicus
ENSRROG00000012334	POP1	100	99.707	ENSRBIG00000007996	POP1	100	99.707	Rhinopithecus_bieti
ENSRROG00000012334	POP1	99	93.775	ENSSBOG00000020830	POP1	100	93.775	Saimiri_boliviensis_boliviensis
ENSRROG00000012334	POP1	100	69.313	ENSSHAG00000000296	POP1	100	69.313	Sarcophilus_harrisii
ENSRROG00000012334	POP1	100	47.424	ENSSFOG00015007429	pop1	99	47.148	Scleropages_formosus
ENSRROG00000012334	POP1	86	53.446	ENSSMAG00000010467	POP1	98	54.058	Scophthalmus_maximus
ENSRROG00000012334	POP1	100	46.509	ENSSDUG00000007817	POP1	100	46.711	Seriola_dumerili
ENSRROG00000012334	POP1	100	46.704	ENSSLDG00000012565	POP1	100	46.992	Seriola_lalandi_dorsalis
ENSRROG00000012334	POP1	100	59.651	ENSSPUG00000003550	-	100	59.923	Sphenodon_punctatus
ENSRROG00000012334	POP1	100	47.150	ENSSPAG00000014955	pop1	100	46.957	Stegastes_partitus
ENSRROG00000012334	POP1	100	81.934	ENSSSCG00000006078	POP1	100	81.934	Sus_scrofa
ENSRROG00000012334	POP1	92	57.143	ENSTGUG00000012011	-	100	57.143	Taeniopygia_guttata
ENSRROG00000012334	POP1	91	48.626	ENSTRUG00000010856	pop1	94	48.626	Takifugu_rubripes
ENSRROG00000012334	POP1	93	48.209	ENSTNIG00000013297	pop1	99	48.209	Tetraodon_nigroviridis
ENSRROG00000012334	POP1	95	80.757	ENSTBEG00000014214	POP1	100	80.757	Tupaia_belangeri
ENSRROG00000012334	POP1	100	80.078	ENSTTRG00000016071	POP1	100	80.078	Tursiops_truncatus
ENSRROG00000012334	POP1	99	78.184	ENSUAMG00000017309	POP1	100	78.184	Ursus_americanus
ENSRROG00000012334	POP1	92	89.879	ENSUMAG00000016952	POP1	100	89.879	Ursus_maritimus
ENSRROG00000012334	POP1	82	87.956	ENSVPAG00000008278	POP1	82	87.956	Vicugna_pacos
ENSRROG00000012334	POP1	100	81.934	ENSVVUG00000010994	POP1	100	81.934	Vulpes_vulpes
ENSRROG00000012334	POP1	100	43.210	ENSXCOG00000017043	POP1	100	43.565	Xiphophorus_couchianus
ENSRROG00000012334	POP1	100	47.464	ENSXMAG00000002472	POP1	100	47.464	Xiphophorus_maculatus