EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000021975 (Gene tree)
Gene ID: 104657389
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrKN299963.1:345753-346013
Accession: 104657389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000005321	LSM	PF01423.22	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000024349	-	261	XM_010357172	ENSRROP00000005321	86 (aa)	XP_010355474	A0A2K6NM30

Gene Model

Click here to download ENSRROG00000021975's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000021975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000021975	-	100	96.512	ENSRROG00000031057	-	100	96.512
ENSRROG00000021975	-	77	51.515	ENSRROG00000024868	LSM6	83	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000021975	-	100	96.512	ENSG00000139343	SNRPF	100	96.512	Homo_sapiens
ENSRROG00000021975	-	86	94.595	ENSAPOG00000003377	snrpf	58	94.595	Acanthochromis_polyacanthus
ENSRROG00000021975	-	88	84.211	ENSAMEG00000018718	-	87	85.333	Ailuropoda_melanoleuca
ENSRROG00000021975	-	99	96.471	ENSAMEG00000002166	-	100	96.471	Ailuropoda_melanoleuca
ENSRROG00000021975	-	85	94.521	ENSACIG00000013216	snrpf	86	94.521	Amphilophus_citrinellus
ENSRROG00000021975	-	85	94.521	ENSAOCG00000015108	snrpf	86	94.521	Amphiprion_ocellaris
ENSRROG00000021975	-	85	94.521	ENSAPEG00000022022	snrpf	86	94.521	Amphiprion_percula
ENSRROG00000021975	-	85	94.521	ENSATEG00000022625	snrpf	78	94.521	Anabas_testudineus
ENSRROG00000021975	-	86	95.946	ENSACAG00000014073	SNRPF	85	95.946	Anolis_carolinensis
ENSRROG00000021975	-	83	88.732	ENSANAG00000020297	-	65	88.732	Aotus_nancymaae
ENSRROG00000021975	-	100	96.512	ENSANAG00000032845	SNRPF	100	96.512	Aotus_nancymaae
ENSRROG00000021975	-	87	68.000	ENSANAG00000025860	-	85	68.000	Aotus_nancymaae
ENSRROG00000021975	-	85	94.521	ENSACLG00000016066	snrpf	86	94.521	Astatotilapia_calliptera
ENSRROG00000021975	-	87	92.000	ENSAMXG00000007421	snrpf	87	92.000	Astyanax_mexicanus
ENSRROG00000021975	-	91	91.026	ENSBTAG00000050012	-	93	90.667	Bos_taurus
ENSRROG00000021975	-	100	96.512	ENSBTAG00000016271	SNRPF	100	96.512	Bos_taurus
ENSRROG00000021975	-	90	70.130	WBGene00004918	snr-5	85	72.222	Caenorhabditis_elegans
ENSRROG00000021975	-	100	96.512	ENSCJAG00000002705	-	100	96.512	Callithrix_jacchus
ENSRROG00000021975	-	100	96.512	ENSCAFG00000006395	-	77	96.512	Canis_familiaris
ENSRROG00000021975	-	85	90.411	ENSCAFG00000031151	-	87	90.667	Canis_familiaris
ENSRROG00000021975	-	87	88.000	ENSCAFG00020013161	-	74	94.286	Canis_lupus_dingo
ENSRROG00000021975	-	85	90.411	ENSCAFG00020010823	-	87	90.667	Canis_lupus_dingo
ENSRROG00000021975	-	92	92.405	ENSTSYG00000031636	-	61	93.151	Carlito_syrichta
ENSRROG00000021975	-	87	85.333	ENSTSYG00000030635	-	87	85.333	Carlito_syrichta
ENSRROG00000021975	-	87	90.789	ENSTSYG00000036502	-	87	90.789	Carlito_syrichta
ENSRROG00000021975	-	99	96.471	ENSCAPG00000007242	SNRPF	100	96.471	Cavia_aperea
ENSRROG00000021975	-	100	96.512	ENSCPOG00000013898	SNRPF	100	96.512	Cavia_porcellus
ENSRROG00000021975	-	100	86.047	ENSCCAG00000033627	-	59	86.667	Cebus_capucinus
ENSRROG00000021975	-	100	96.512	ENSCCAG00000037378	-	100	96.512	Cebus_capucinus
ENSRROG00000021975	-	100	95.349	ENSCCAG00000017356	-	87	97.333	Cebus_capucinus
ENSRROG00000021975	-	100	96.512	ENSCLAG00000007200	SNRPF	100	96.512	Chinchilla_lanigera
ENSRROG00000021975	-	100	96.512	ENSCSAG00000003602	-	70	96.512	Chlorocebus_sabaeus
ENSRROG00000021975	-	74	96.875	ENSCHOG00000009392	SNRPF	100	96.875	Choloepus_hoffmanni
ENSRROG00000021975	-	100	86.047	ENSCPBG00000026463	-	87	88.000	Chrysemys_picta_bellii
ENSRROG00000021975	-	87	89.333	ENSCPBG00000006227	-	87	89.333	Chrysemys_picta_bellii
ENSRROG00000021975	-	100	84.884	ENSCPBG00000001985	-	89	88.000	Chrysemys_picta_bellii
ENSRROG00000021975	-	99	90.588	ENSCPBG00000024287	-	60	93.243	Chrysemys_picta_bellii
ENSRROG00000021975	-	99	83.529	ENSCSAVG00000007498	-	84	86.486	Ciona_savignyi
ENSRROG00000021975	-	87	90.667	ENSCGRG00001008965	-	58	90.667	Cricetulus_griseus_chok1gshd
ENSRROG00000021975	-	100	96.512	ENSCGRG00001017100	-	100	96.512	Cricetulus_griseus_chok1gshd
ENSRROG00000021975	-	93	91.250	ENSCGRG00000018878	-	94	90.667	Cricetulus_griseus_crigri
ENSRROG00000021975	-	100	96.512	ENSCGRG00000000336	-	100	96.512	Cricetulus_griseus_crigri
ENSRROG00000021975	-	87	93.333	ENSCSEG00000004748	snrpf	87	93.333	Cynoglossus_semilaevis
ENSRROG00000021975	-	86	94.595	ENSCVAG00000000397	snrpf	59	94.595	Cyprinodon_variegatus
ENSRROG00000021975	-	87	92.208	ENSDARG00000105037	snrpf	88	92.208	Danio_rerio
ENSRROG00000021975	-	100	96.512	ENSDNOG00000043775	-	55	96.512	Dasypus_novemcinctus
ENSRROG00000021975	-	87	96.000	ENSDNOG00000048989	-	67	96.000	Dasypus_novemcinctus
ENSRROG00000021975	-	87	84.000	ENSDNOG00000049373	-	65	84.000	Dasypus_novemcinctus
ENSRROG00000021975	-	84	88.889	ENSDORG00000025351	-	100	88.889	Dipodomys_ordii
ENSRROG00000021975	-	69	94.915	ENSDORG00000029740	-	72	94.915	Dipodomys_ordii
ENSRROG00000021975	-	98	75.000	FBgn0000426	SmF	83	79.452	Drosophila_melanogaster
ENSRROG00000021975	-	100	96.512	ENSETEG00000001558	-	100	96.512	Echinops_telfairi
ENSRROG00000021975	-	95	73.171	ENSEBUG00000001793	-	72	83.582	Eptatretus_burgeri
ENSRROG00000021975	-	100	96.512	ENSECAG00000019817	SNRPF	70	96.512	Equus_caballus
ENSRROG00000021975	-	99	96.471	ENSEEUG00000013509	SNRPF	100	96.471	Erinaceus_europaeus
ENSRROG00000021975	-	100	88.372	ENSELUG00000007737	RUXF	86	90.667	Esox_lucius
ENSRROG00000021975	-	87	92.000	ENSELUG00000003121	RUXF	87	92.000	Esox_lucius
ENSRROG00000021975	-	98	77.381	ENSFCAG00000031148	-	69	76.000	Felis_catus
ENSRROG00000021975	-	100	96.512	ENSFCAG00000029966	-	100	96.512	Felis_catus
ENSRROG00000021975	-	87	73.333	ENSFCAG00000021942	-	87	73.333	Felis_catus
ENSRROG00000021975	-	99	96.471	ENSFALG00000010799	SNRPF	99	96.471	Ficedula_albicollis
ENSRROG00000021975	-	100	96.512	ENSFDAG00000002831	-	100	96.512	Fukomys_damarensis
ENSRROG00000021975	-	86	94.595	ENSFHEG00000003240	snrpf	65	94.595	Fundulus_heteroclitus
ENSRROG00000021975	-	86	94.595	ENSGMOG00000007741	snrpf	87	94.595	Gadus_morhua
ENSRROG00000021975	-	100	96.512	ENSGALG00000011409	SNRPF	100	96.512	Gallus_gallus
ENSRROG00000021975	-	85	94.521	ENSGAFG00000016187	snrpf	84	94.521	Gambusia_affinis
ENSRROG00000021975	-	86	93.243	ENSGACG00000020055	snrpf	87	93.243	Gasterosteus_aculeatus
ENSRROG00000021975	-	70	86.667	ENSGAGG00000011163	-	86	91.837	Gopherus_agassizii
ENSRROG00000021975	-	92	87.342	ENSGAGG00000022991	-	80	91.176	Gopherus_agassizii
ENSRROG00000021975	-	80	84.058	ENSGAGG00000014132	-	83	84.058	Gopherus_agassizii
ENSRROG00000021975	-	86	89.189	ENSGAGG00000012945	-	69	92.000	Gopherus_agassizii
ENSRROG00000021975	-	72	93.548	ENSGAGG00000020974	-	54	90.625	Gopherus_agassizii
ENSRROG00000021975	-	92	74.684	ENSGGOG00000039564	-	90	73.333	Gorilla_gorilla
ENSRROG00000021975	-	98	77.381	ENSGGOG00000039936	-	83	76.000	Gorilla_gorilla
ENSRROG00000021975	-	100	96.512	ENSGGOG00000001127	-	100	96.512	Gorilla_gorilla
ENSRROG00000021975	-	87	96.000	ENSHGLG00000021172	-	87	96.000	Heterocephalus_glaber_female
ENSRROG00000021975	-	100	96.512	ENSHGLG00000009108	SNRPF	100	96.512	Heterocephalus_glaber_female
ENSRROG00000021975	-	87	96.000	ENSHGLG00100019596	-	87	96.000	Heterocephalus_glaber_male
ENSRROG00000021975	-	99	96.471	ENSHGLG00100008103	-	100	96.471	Heterocephalus_glaber_male
ENSRROG00000021975	-	73	82.857	ENSHCOG00000018663	snrpf	55	82.857	Hippocampus_comes
ENSRROG00000021975	-	87	94.667	ENSIPUG00000018994	snrpf	87	94.667	Ictalurus_punctatus
ENSRROG00000021975	-	100	96.512	ENSSTOG00000010434	-	100	96.512	Ictidomys_tridecemlineatus
ENSRROG00000021975	-	100	83.721	ENSJJAG00000010502	-	89	86.667	Jaculus_jaculus
ENSRROG00000021975	-	100	96.512	ENSJJAG00000011272	-	100	96.512	Jaculus_jaculus
ENSRROG00000021975	-	100	79.070	ENSJJAG00000004558	-	89	81.333	Jaculus_jaculus
ENSRROG00000021975	-	78	89.552	ENSJJAG00000004828	-	86	92.857	Jaculus_jaculus
ENSRROG00000021975	-	87	93.333	ENSKMAG00000013566	snrpf	87	93.333	Kryptolebias_marmoratus
ENSRROG00000021975	-	87	93.333	ENSLBEG00000008800	snrpf	87	93.333	Labrus_bergylta
ENSRROG00000021975	-	100	95.349	ENSLACG00000002456	-	74	95.349	Latimeria_chalumnae
ENSRROG00000021975	-	87	92.000	ENSLOCG00000015744	snrpf	87	92.000	Lepisosteus_oculatus
ENSRROG00000021975	-	99	96.471	ENSLAFG00000017426	SNRPF	99	96.471	Loxodonta_africana
ENSRROG00000021975	-	85	93.151	ENSMAMG00000016593	snrpf	86	93.151	Mastacembelus_armatus
ENSRROG00000021975	-	85	94.521	ENSMZEG00005014701	snrpf	86	94.521	Maylandia_zebra
ENSRROG00000021975	-	98	96.429	ENSMGAG00000011453	-	76	96.429	Meleagris_gallopavo
ENSRROG00000021975	-	87	92.000	ENSMAUG00000008799	-	87	92.000	Mesocricetus_auratus
ENSRROG00000021975	-	73	96.825	ENSMAUG00000016909	-	85	96.825	Mesocricetus_auratus
ENSRROG00000021975	-	73	96.825	ENSMAUG00000019737	-	85	96.825	Mesocricetus_auratus
ENSRROG00000021975	-	97	71.084	ENSMAUG00000010289	-	86	72.222	Mesocricetus_auratus
ENSRROG00000021975	-	87	90.667	ENSMICG00000030494	-	60	90.667	Microcebus_murinus
ENSRROG00000021975	-	100	96.512	ENSMICG00000012153	-	100	96.512	Microcebus_murinus
ENSRROG00000021975	-	79	82.353	ENSMOCG00000020220	-	87	82.353	Microtus_ochrogaster
ENSRROG00000021975	-	87	84.000	ENSMOCG00000022166	-	82	84.000	Microtus_ochrogaster
ENSRROG00000021975	-	100	96.512	ENSMOCG00000020437	Snrpf	100	96.512	Microtus_ochrogaster
ENSRROG00000021975	-	86	93.243	ENSMMOG00000007127	snrpf	87	93.243	Mola_mola
ENSRROG00000021975	-	100	96.512	ENSMODG00000008091	SNRPF	75	96.512	Monodelphis_domestica
ENSRROG00000021975	-	85	94.521	ENSMALG00000012328	snrpf	86	94.521	Monopterus_albus
ENSRROG00000021975	-	100	96.512	MGP_CAROLIEiJ_G0015735	-	100	96.512	Mus_caroli
ENSRROG00000021975	-	100	96.512	ENSMUSG00000020018	Snrpf	100	96.512	Mus_musculus
ENSRROG00000021975	-	100	96.512	MGP_PahariEiJ_G0031350	Snrpf	100	96.512	Mus_pahari
ENSRROG00000021975	-	100	96.512	MGP_SPRETEiJ_G0016553	Snrpf	100	96.512	Mus_spretus
ENSRROG00000021975	-	100	96.512	ENSMPUG00000007176	-	77	96.512	Mustela_putorius_furo
ENSRROG00000021975	-	100	96.512	ENSMLUG00000027932	-	81	96.512	Myotis_lucifugus
ENSRROG00000021975	-	100	96.512	ENSMLUG00000029201	-	81	96.512	Myotis_lucifugus
ENSRROG00000021975	-	99	96.471	ENSMLUG00000013577	-	100	96.471	Myotis_lucifugus
ENSRROG00000021975	-	100	96.512	ENSMLUG00000026149	-	81	96.512	Myotis_lucifugus
ENSRROG00000021975	-	100	77.907	ENSMLUG00000026269	-	71	77.333	Myotis_lucifugus
ENSRROG00000021975	-	100	96.512	ENSNGAG00000024292	-	100	96.512	Nannospalax_galili
ENSRROG00000021975	-	73	88.889	ENSNGAG00000005851	-	71	88.333	Nannospalax_galili
ENSRROG00000021975	-	86	94.595	ENSNBRG00000011682	snrpf	76	94.595	Neolamprologus_brichardi
ENSRROG00000021975	-	86	68.919	ENSMEUG00000000671	SNRPF	87	68.919	Notamacropus_eugenii
ENSRROG00000021975	-	100	96.512	ENSODEG00000010328	-	100	96.512	Octodon_degus
ENSRROG00000021975	-	100	95.349	ENSOCUG00000010925	SNRPF	76	95.349	Oryctolagus_cuniculus
ENSRROG00000021975	-	86	91.892	ENSORLG00020008216	snrpf	87	91.892	Oryzias_latipes_hni
ENSRROG00000021975	-	86	91.892	ENSORLG00015007418	snrpf	87	91.892	Oryzias_latipes_hsok
ENSRROG00000021975	-	85	93.151	ENSOMEG00000003018	snrpf	86	93.151	Oryzias_melastigma
ENSRROG00000021975	-	87	96.000	ENSOGAG00000030323	-	87	96.000	Otolemur_garnettii
ENSRROG00000021975	-	100	96.512	ENSOARG00000011853	-	75	96.512	Ovis_aries
ENSRROG00000021975	-	92	74.684	ENSPPAG00000037479	-	91	73.333	Pan_paniscus
ENSRROG00000021975	-	98	77.381	ENSPPAG00000037544	-	83	76.000	Pan_paniscus
ENSRROG00000021975	-	98	76.190	ENSPPRG00000007449	-	77	77.333	Panthera_pardus
ENSRROG00000021975	-	100	96.512	ENSPPRG00000005875	-	100	96.512	Panthera_pardus
ENSRROG00000021975	-	100	96.512	ENSPTIG00000007520	SNRPF	100	96.512	Panthera_tigris_altaica
ENSRROG00000021975	-	98	78.571	ENSPTIG00000005117	-	89	77.333	Panthera_tigris_altaica
ENSRROG00000021975	-	92	74.684	ENSPTRG00000047717	-	91	73.333	Pan_troglodytes
ENSRROG00000021975	-	98	77.381	ENSPTRG00000043814	-	83	76.000	Pan_troglodytes
ENSRROG00000021975	-	86	94.595	ENSPKIG00000014784	snrpf	81	94.595	Paramormyrops_kingsleyae
ENSRROG00000021975	-	99	96.471	ENSPSIG00000016462	SNRPF	99	96.471	Pelodiscus_sinensis
ENSRROG00000021975	-	86	93.243	ENSPMGG00000023548	snrpf	87	93.243	Periophthalmus_magnuspinnatus
ENSRROG00000021975	-	100	96.512	ENSPEMG00000023326	Snrpf	100	96.512	Peromyscus_maniculatus_bairdii
ENSRROG00000021975	-	85	94.521	ENSPLAG00000023932	snrpf	86	94.521	Poecilia_latipinna
ENSRROG00000021975	-	85	94.521	ENSPMEG00000003377	snrpf	86	94.521	Poecilia_mexicana
ENSRROG00000021975	-	85	94.521	ENSPREG00000022635	snrpf	84	94.521	Poecilia_reticulata
ENSRROG00000021975	-	100	96.512	ENSPPYG00000004847	-	100	96.512	Pongo_abelii
ENSRROG00000021975	-	100	96.512	ENSPCOG00000023833	-	100	96.512	Propithecus_coquereli
ENSRROG00000021975	-	100	96.512	ENSPVAG00000009036	SNRPF	100	96.512	Pteropus_vampyrus
ENSRROG00000021975	-	85	94.521	ENSPNYG00000021712	snrpf	86	94.521	Pundamilia_nyererei
ENSRROG00000021975	-	85	93.151	ENSPNAG00000019117	snrpf	86	93.151	Pygocentrus_nattereri
ENSRROG00000021975	-	100	96.512	ENSRNOG00000005556	Snrpf	100	96.512	Rattus_norvegicus
ENSRROG00000021975	-	100	98.837	ENSRBIG00000030414	-	100	98.837	Rhinopithecus_bieti
ENSRROG00000021975	-	81	56.338	YPR182W	SMX3	83	56.338	Saccharomyces_cerevisiae
ENSRROG00000021975	-	87	82.667	ENSSBOG00000032297	-	86	82.667	Saimiri_boliviensis_boliviensis
ENSRROG00000021975	-	100	96.512	ENSSBOG00000036179	-	100	96.512	Saimiri_boliviensis_boliviensis
ENSRROG00000021975	-	87	97.333	ENSSBOG00000012868	-	87	97.333	Saimiri_boliviensis_boliviensis
ENSRROG00000021975	-	87	76.923	ENSSBOG00000027638	-	88	76.923	Saimiri_boliviensis_boliviensis
ENSRROG00000021975	-	99	96.471	ENSSHAG00000012294	SNRPF	77	96.471	Sarcophilus_harrisii
ENSRROG00000021975	-	74	93.750	ENSSFOG00015021523	snrpf	96	93.750	Scleropages_formosus
ENSRROG00000021975	-	87	92.000	ENSSMAG00000005533	snrpf	86	92.000	Scophthalmus_maximus
ENSRROG00000021975	-	76	93.846	ENSSDUG00000016283	snrpf	77	93.846	Seriola_dumerili
ENSRROG00000021975	-	93	71.250	ENSSLDG00000003885	-	90	74.324	Seriola_lalandi_dorsalis
ENSRROG00000021975	-	87	93.333	ENSSLDG00000005119	snrpf	87	93.333	Seriola_lalandi_dorsalis
ENSRROG00000021975	-	98	96.429	ENSSPUG00000014590	-	99	96.429	Sphenodon_punctatus
ENSRROG00000021975	-	86	94.595	ENSSPAG00000003283	snrpf	84	94.595	Stegastes_partitus
ENSRROG00000021975	-	100	96.512	ENSSSCG00000000895	SNRPF	100	96.512	Sus_scrofa
ENSRROG00000021975	-	67	91.379	ENSTRUG00000014956	snrpf	84	91.379	Takifugu_rubripes
ENSRROG00000021975	-	87	93.333	ENSTNIG00000012672	snrpf	87	93.333	Tetraodon_nigroviridis
ENSRROG00000021975	-	87	69.333	ENSTTRG00000006070	SNRPF	87	69.333	Tursiops_truncatus
ENSRROG00000021975	-	95	85.366	ENSUAMG00000001101	-	88	86.667	Ursus_americanus
ENSRROG00000021975	-	100	96.512	ENSUAMG00000008176	-	100	96.512	Ursus_americanus
ENSRROG00000021975	-	87	86.667	ENSUMAG00000006177	-	88	86.667	Ursus_maritimus
ENSRROG00000021975	-	100	96.512	ENSUMAG00000003528	-	100	96.512	Ursus_maritimus
ENSRROG00000021975	-	100	96.512	ENSVPAG00000008712	-	100	96.512	Vicugna_pacos
ENSRROG00000021975	-	91	91.026	ENSVVUG00000023821	-	96	90.667	Vulpes_vulpes
ENSRROG00000021975	-	86	73.684	ENSXETG00000021630	snrpf	87	73.684	Xenopus_tropicalis
ENSRROG00000021975	-	85	94.521	ENSXCOG00000013860	snrpf	84	94.521	Xiphophorus_couchianus
ENSRROG00000021975	-	85	94.521	ENSXMAG00000015448	snrpf	86	94.521	Xiphophorus_maculatus