EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000024699 (Gene tree)
Gene ID: 104682550
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 8079 bases
Position: chrKN299213.1:4593811-4601889
Accession: 104682550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000006185	APOBEC_N	PF08210.11	1.7e-35	1	1
ENSRROP00000006177	APOBEC_N	PF08210.11	2.1e-35	1	1
ENSRROP00000006181	APOBEC_N	PF08210.11	2.7e-35	1	1
ENSRROP00000006188	APOBEC_N	PF08210.11	3e-27	1	1
ENSRROP00000006185	APOBEC_C	PF05240.14	2.9e-26	1	1
ENSRROP00000006181	APOBEC_C	PF05240.14	3e-26	1	1
ENSRROP00000006177	APOBEC_C	PF05240.14	3e-26	1	1
ENSRROP00000006188	APOBEC_C	PF05240.14	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000027451	APOBEC3H-201	1037	XM_010389264	ENSRROP00000006177	211 (aa)	XP_010387566	A0A2K6NPH9
ENSRROT00000027486	APOBEC3H-204	465	-	ENSRROP00000006188	154 (aa)	-	A0A2K6NPH7
ENSRROT00000027479	APOBEC3H-203	603	-	ENSRROP00000006185	200 (aa)	-	A0A2K6NPI6
ENSRROT00000027475	APOBEC3H-202	1184	XM_010389262	ENSRROP00000006181	230 (aa)	XP_010387564	A0A2K6NPI0

Gene Model

Click here to download ENSRROG00000024699's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000024699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000024699	APOBEC3H	88	35.714	ENSRROG00000029996	-	95	33.862
ENSRROG00000024699	APOBEC3H	93	33.333	ENSRROG00000032866	AICDA	100	32.524
ENSRROG00000024699	APOBEC3H	97	34.694	ENSRROG00000028557	-	97	34.653
ENSRROG00000024699	APOBEC3H	90	37.179	ENSRROG00000029045	APOBEC3C	97	35.079
ENSRROG00000024699	APOBEC3H	90	37.696	ENSRROG00000028773	APOBEC3G	97	36.598
ENSRROG00000024699	APOBEC3H	65	31.298	ENSRROG00000033576	APOBEC1	53	33.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000024699	APOBEC3H	100	81.000	ENSG00000100298	APOBEC3H	100	81.421	Homo_sapiens
ENSRROG00000024699	APOBEC3H	94	49.754	ENSAMEG00000010818	-	83	49.065	Ailuropoda_melanoleuca
ENSRROG00000024699	APOBEC3H	94	73.267	ENSANAG00000025410	APOBEC3H	96	72.093	Aotus_nancymaae
ENSRROG00000024699	APOBEC3H	97	51.667	ENSBTAG00000007755	APOBEC3H	94	51.667	Bos_taurus
ENSRROG00000024699	APOBEC3H	100	74.000	ENSCJAG00000012524	APOBEC3H	100	74.000	Callithrix_jacchus
ENSRROG00000024699	APOBEC3H	97	46.392	ENSCAFG00000001361	APOBEC3Z3	100	48.485	Canis_familiaris
ENSRROG00000024699	APOBEC3H	95	46.500	ENSCAFG00020002584	-	94	48.649	Canis_lupus_dingo
ENSRROG00000024699	APOBEC3H	94	50.270	ENSCHIG00000026580	-	98	50.270	Capra_hircus
ENSRROG00000024699	APOBEC3H	99	48.026	ENSTSYG00000032894	-	100	51.124	Carlito_syrichta
ENSRROG00000024699	APOBEC3H	96	55.224	ENSCPOG00000009257	-	91	55.224	Cavia_porcellus
ENSRROG00000024699	APOBEC3H	100	72.611	ENSCCAG00000008525	APOBEC3H	100	72.611	Cebus_capucinus
ENSRROG00000024699	APOBEC3H	100	89.500	ENSCATG00000030302	APOBEC3H	100	89.500	Cercocebus_atys
ENSRROG00000024699	APOBEC3H	95	54.500	ENSCLAG00000016615	-	98	54.500	Chinchilla_lanigera
ENSRROG00000024699	APOBEC3H	100	88.152	ENSCSAG00000006371	APOBEC3H	100	88.152	Chlorocebus_sabaeus
ENSRROG00000024699	APOBEC3H	95	52.217	ENSCGRG00001022976	Apobec3	92	52.217	Cricetulus_griseus_chok1gshd
ENSRROG00000024699	APOBEC3H	95	52.217	ENSCGRG00000005621	Apobec3	93	52.217	Cricetulus_griseus_crigri
ENSRROG00000024699	APOBEC3H	91	53.103	ENSDORG00000027271	-	99	42.857	Dipodomys_ordii
ENSRROG00000024699	APOBEC3H	94	51.000	ENSECAG00000007726	APOBEC3H	87	50.490	Equus_caballus
ENSRROG00000024699	APOBEC3H	94	50.251	ENSFCAG00000005251	APOBEC3Z3	99	49.495	Felis_catus
ENSRROG00000024699	APOBEC3H	91	57.143	ENSSTOG00000007125	-	85	55.000	Ictidomys_tridecemlineatus
ENSRROG00000024699	APOBEC3H	92	50.694	ENSJJAG00000016840	-	74	51.471	Jaculus_jaculus
ENSRROG00000024699	APOBEC3H	94	51.685	ENSLAFG00000027404	-	96	51.685	Loxodonta_africana
ENSRROG00000024699	APOBEC3H	100	90.000	ENSMFAG00000031827	APOBEC3H	100	90.000	Macaca_fascicularis
ENSRROG00000024699	APOBEC3H	100	89.610	ENSMMUG00000001016	APOBEC3H	100	89.610	Macaca_mulatta
ENSRROG00000024699	APOBEC3H	100	90.500	ENSMNEG00000039259	APOBEC3H	100	90.500	Macaca_nemestrina
ENSRROG00000024699	APOBEC3H	100	90.500	ENSMLEG00000033417	APOBEC3H	100	90.500	Mandrillus_leucophaeus
ENSRROG00000024699	APOBEC3H	95	50.490	ENSMAUG00000011683	Apobec3	91	49.765	Mesocricetus_auratus
ENSRROG00000024699	APOBEC3H	94	49.749	ENSMOCG00000021576	Apobec3	80	50.754	Microtus_ochrogaster
ENSRROG00000024699	APOBEC3H	95	48.515	MGP_CAROLIEiJ_G0020029	Apobec3	97	47.196	Mus_caroli
ENSRROG00000024699	APOBEC3H	96	47.590	ENSMUSG00000009585	Apobec3	97	49.485	Mus_musculus
ENSRROG00000024699	APOBEC3H	95	48.293	MGP_PahariEiJ_G0020031	-	91	47.005	Mus_pahari
ENSRROG00000024699	APOBEC3H	96	47.514	MGP_SPRETEiJ_G0020927	Apobec3	98	40.476	Mus_spretus
ENSRROG00000024699	APOBEC3H	97	47.651	ENSMPUG00000013239	-	76	49.000	Mustela_putorius_furo
ENSRROG00000024699	APOBEC3H	96	48.500	ENSNGAG00000018998	Apobec3	100	48.500	Nannospalax_galili
ENSRROG00000024699	APOBEC3H	100	84.834	ENSNLEG00000015218	-	100	84.834	Nomascus_leucogenys
ENSRROG00000024699	APOBEC3H	92	42.553	ENSOCUG00000023913	-	90	42.408	Oryctolagus_cuniculus
ENSRROG00000024699	APOBEC3H	94	50.556	ENSOARG00000016290	APOBEC3F	97	50.556	Ovis_aries
ENSRROG00000024699	APOBEC3H	100	82.000	ENSPPAG00000036522	APOBEC3H	100	82.000	Pan_paniscus
ENSRROG00000024699	APOBEC3H	89	38.356	ENSPPRG00000003675	-	82	39.130	Panthera_pardus
ENSRROG00000024699	APOBEC3H	94	49.749	ENSPPRG00000003941	-	99	49.749	Panthera_pardus
ENSRROG00000024699	APOBEC3H	94	49.749	ENSPTIG00000010283	-	99	49.749	Panthera_tigris_altaica
ENSRROG00000024699	APOBEC3H	100	82.000	ENSPTRG00000014390	APOBEC3H	100	82.000	Pan_troglodytes
ENSRROG00000024699	APOBEC3H	100	90.047	ENSPANG00000010774	APOBEC3H	100	90.047	Papio_anubis
ENSRROG00000024699	APOBEC3H	96	46.602	ENSPEMG00000000456	Apobec3	84	46.190	Peromyscus_maniculatus_bairdii
ENSRROG00000024699	APOBEC3H	95	85.075	ENSPPYG00000011834	-	100	83.886	Pongo_abelii
ENSRROG00000024699	APOBEC3H	89	44.382	ENSPCAG00000015655	-	99	44.444	Procavia_capensis
ENSRROG00000024699	APOBEC3H	89	50.562	ENSPVAG00000009462	-	98	50.562	Pteropus_vampyrus
ENSRROG00000024699	APOBEC3H	65	35.385	ENSPVAG00000024267	-	95	35.385	Pteropus_vampyrus
ENSRROG00000024699	APOBEC3H	64	36.719	ENSPVAG00000024161	-	94	36.719	Pteropus_vampyrus
ENSRROG00000024699	APOBEC3H	91	49.189	ENSRNOG00000016852	Apobec3	91	47.000	Rattus_norvegicus
ENSRROG00000024699	APOBEC3H	100	98.701	ENSRBIG00000029088	APOBEC3H	100	98.701	Rhinopithecus_bieti
ENSRROG00000024699	APOBEC3H	99	66.355	ENSSBOG00000030005	APOBEC3H	100	72.131	Saimiri_boliviensis_boliviensis
ENSRROG00000024699	APOBEC3H	97	55.147	ENSSSCG00000000091	APOBEC3B	92	52.607	Sus_scrofa
ENSRROG00000024699	APOBEC3H	86	56.061	ENSTBEG00000001532	-	98	54.651	Tupaia_belangeri
ENSRROG00000024699	APOBEC3H	88	54.412	ENSTTRG00000001266	-	99	51.667	Tursiops_truncatus
ENSRROG00000024699	APOBEC3H	90	51.034	ENSUAMG00000004427	-	88	48.744	Ursus_americanus
ENSRROG00000024699	APOBEC3H	94	52.525	ENSUMAG00000014435	-	99	52.525	Ursus_maritimus
ENSRROG00000024699	APOBEC3H	65	56.923	ENSVPAG00000011108	-	98	56.923	Vicugna_pacos