EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000028206 (Gene tree)
Gene ID: 104677481
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 63920 bases
Position: chrKN298512.1:339512-403431
Accession: 104677481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000007922	Rif1_N	PF12231.8	7.7e-78	1	1
ENSRROP00000007930	Rif1_N	PF12231.8	4.5e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000031850	RIF1-202	7371	XM_010382507	ENSRROP00000007930	2456 (aa)	XP_010380809	A0A2K6NUI1
ENSRROT00000031837	RIF1-201	9768	XM_010382506	ENSRROP00000007922	2471 (aa)	XP_010380808	A0A2K6NUG6

Gene Model

Click here to download ENSRROG00000028206's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000028206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000028206	RIF1	100	95.591	ENSG00000080345	RIF1	97	98.779	Homo_sapiens
ENSRROG00000028206	RIF1	99	80.484	ENSAMEG00000008461	RIF1	100	80.484	Ailuropoda_melanoleuca
ENSRROG00000028206	RIF1	64	50.469	ENSACIG00000017765	rif1	69	50.469	Amphilophus_citrinellus
ENSRROG00000028206	RIF1	65	48.223	ENSAOCG00000017231	rif1	65	48.223	Amphiprion_ocellaris
ENSRROG00000028206	RIF1	65	48.313	ENSATEG00000022887	rif1	68	48.213	Anabas_testudineus
ENSRROG00000028206	RIF1	84	66.181	ENSAPLG00000007092	RIF1	92	65.889	Anas_platyrhynchos
ENSRROG00000028206	RIF1	85	55.068	ENSACAG00000003714	RIF1	91	55.068	Anolis_carolinensis
ENSRROG00000028206	RIF1	100	90.416	ENSANAG00000024840	RIF1	100	90.295	Aotus_nancymaae
ENSRROG00000028206	RIF1	64	45.438	ENSAMXG00000010910	rif1	52	51.748	Astyanax_mexicanus
ENSRROG00000028206	RIF1	94	79.244	ENSBTAG00000021020	RIF1	99	79.244	Bos_taurus
ENSRROG00000028206	RIF1	100	89.814	ENSCJAG00000003138	RIF1	100	89.693	Callithrix_jacchus
ENSRROG00000028206	RIF1	100	79.051	ENSCAFG00000005670	RIF1	97	78.890	Canis_familiaris
ENSRROG00000028206	RIF1	100	78.284	ENSCAFG00020016401	RIF1	100	78.122	Canis_lupus_dingo
ENSRROG00000028206	RIF1	100	79.355	ENSCHIG00000020327	RIF1	100	79.355	Capra_hircus
ENSRROG00000028206	RIF1	99	79.831	ENSTSYG00000008861	RIF1	100	79.831	Carlito_syrichta
ENSRROG00000028206	RIF1	79	86.047	ENSCAPG00000008957	RIF1	96	86.047	Cavia_aperea
ENSRROG00000028206	RIF1	99	71.400	ENSCPOG00000037898	RIF1	99	71.187	Cavia_porcellus
ENSRROG00000028206	RIF1	100	89.284	ENSCCAG00000024760	RIF1	100	89.123	Cebus_capucinus
ENSRROG00000028206	RIF1	100	97.693	ENSCATG00000033353	RIF1	100	97.693	Cercocebus_atys
ENSRROG00000028206	RIF1	96	74.288	ENSCLAG00000001517	RIF1	99	74.068	Chinchilla_lanigera
ENSRROG00000028206	RIF1	100	97.612	ENSCSAG00000016089	RIF1	100	97.612	Chlorocebus_sabaeus
ENSRROG00000028206	RIF1	97	78.261	ENSCHOG00000007187	RIF1	97	78.261	Choloepus_hoffmanni
ENSRROG00000028206	RIF1	90	72.485	ENSCPBG00000025885	RIF1	95	73.669	Chrysemys_picta_bellii
ENSRROG00000028206	RIF1	100	96.966	ENSCANG00000028962	RIF1	100	98.223	Colobus_angolensis_palliatus
ENSRROG00000028206	RIF1	99	70.350	ENSCGRG00001024589	Rif1	100	70.217	Cricetulus_griseus_chok1gshd
ENSRROG00000028206	RIF1	99	71.423	ENSCGRG00000010713	Rif1	100	71.464	Cricetulus_griseus_crigri
ENSRROG00000028206	RIF1	67	48.137	ENSCVAG00000022479	rif1	71	48.137	Cyprinodon_variegatus
ENSRROG00000028206	RIF1	99	77.085	ENSDNOG00000011194	RIF1	97	77.085	Dasypus_novemcinctus
ENSRROG00000028206	RIF1	94	72.824	ENSETEG00000012421	RIF1	92	72.500	Echinops_telfairi
ENSRROG00000028206	RIF1	96	87.949	ENSEASG00005023434	RIF1	98	92.079	Equus_asinus_asinus
ENSRROG00000028206	RIF1	97	90.950	ENSECAG00000012679	RIF1	100	90.950	Equus_caballus
ENSRROG00000028206	RIF1	64	50.957	ENSELUG00000006826	rif1	56	50.831	Esox_lucius
ENSRROG00000028206	RIF1	100	79.517	ENSFCAG00000029742	RIF1	100	79.598	Felis_catus
ENSRROG00000028206	RIF1	78	64.329	ENSFALG00000013874	RIF1	91	64.939	Ficedula_albicollis
ENSRROG00000028206	RIF1	99	75.545	ENSFDAG00000006538	RIF1	99	75.545	Fukomys_damarensis
ENSRROG00000028206	RIF1	62	50.401	ENSFHEG00000013721	rif1	65	50.161	Fundulus_heteroclitus
ENSRROG00000028206	RIF1	54	52.747	ENSGMOG00000003517	rif1	81	52.747	Gadus_morhua
ENSRROG00000028206	RIF1	79	65.294	ENSGALG00000012484	RIF1	91	65.294	Gallus_gallus
ENSRROG00000028206	RIF1	65	51.189	ENSGAFG00000017196	rif1	75	51.575	Gambusia_affinis
ENSRROG00000028206	RIF1	59	55.285	ENSGACG00000008579	rif1	66	54.800	Gasterosteus_aculeatus
ENSRROG00000028206	RIF1	88	72.156	ENSGAGG00000012595	RIF1	97	73.273	Gopherus_agassizii
ENSRROG00000028206	RIF1	90	99.142	ENSGGOG00000040178	RIF1	96	99.142	Gorilla_gorilla
ENSRROG00000028206	RIF1	72	51.095	ENSHBUG00000007125	rif1	76	51.016	Haplochromis_burtoni
ENSRROG00000028206	RIF1	95	75.202	ENSHGLG00100009807	RIF1	99	74.766	Heterocephalus_glaber_male
ENSRROG00000028206	RIF1	63	48.919	ENSHCOG00000015943	rif1	60	48.526	Hippocampus_comes
ENSRROG00000028206	RIF1	100	77.604	ENSSTOG00000020712	RIF1	100	77.453	Ictidomys_tridecemlineatus
ENSRROG00000028206	RIF1	99	69.935	ENSJJAG00000023000	Rif1	100	69.774	Jaculus_jaculus
ENSRROG00000028206	RIF1	63	50.833	ENSLBEG00000023196	rif1	59	50.833	Labrus_bergylta
ENSRROG00000028206	RIF1	86	63.582	ENSLACG00000005425	RIF1	91	63.582	Latimeria_chalumnae
ENSRROG00000028206	RIF1	62	54.180	ENSLOCG00000002657	rif1	82	52.903	Lepisosteus_oculatus
ENSRROG00000028206	RIF1	99	77.890	ENSLAFG00000009796	RIF1	100	77.872	Loxodonta_africana
ENSRROG00000028206	RIF1	100	97.734	ENSMFAG00000032233	RIF1	100	97.734	Macaca_fascicularis
ENSRROG00000028206	RIF1	100	97.693	ENSMMUG00000008611	RIF1	100	97.693	Macaca_mulatta
ENSRROG00000028206	RIF1	100	97.653	ENSMNEG00000031616	RIF1	100	97.653	Macaca_nemestrina
ENSRROG00000028206	RIF1	100	97.815	ENSMLEG00000042945	RIF1	100	97.815	Mandrillus_leucophaeus
ENSRROG00000028206	RIF1	75	48.916	ENSMAMG00000001745	rif1	60	53.846	Mastacembelus_armatus
ENSRROG00000028206	RIF1	63	51.113	ENSMZEG00005020920	rif1	69	50.949	Maylandia_zebra
ENSRROG00000028206	RIF1	84	62.040	ENSMGAG00000012732	RIF1	91	62.040	Meleagris_gallopavo
ENSRROG00000028206	RIF1	94	90.251	ENSMAUG00000013158	Rif1	99	90.251	Mesocricetus_auratus
ENSRROG00000028206	RIF1	100	84.281	ENSMICG00000046127	RIF1	100	84.113	Microcebus_murinus
ENSRROG00000028206	RIF1	99	70.311	ENSMOCG00000009381	Rif1	100	70.121	Microtus_ochrogaster
ENSRROG00000028206	RIF1	62	49.960	ENSMMOG00000006519	rif1	64	49.682	Mola_mola
ENSRROG00000028206	RIF1	100	60.272	ENSMODG00000003703	RIF1	100	60.096	Monodelphis_domestica
ENSRROG00000028206	RIF1	63	49.232	ENSMALG00000016759	rif1	72	49.474	Monopterus_albus
ENSRROG00000028206	RIF1	99	69.302	MGP_CAROLIEiJ_G0023555	Rif1	100	69.383	Mus_caroli
ENSRROG00000028206	RIF1	99	69.920	ENSMUSG00000036202	Rif1	100	70.000	Mus_musculus
ENSRROG00000028206	RIF1	99	68.415	MGP_PahariEiJ_G0025006	Rif1	100	68.374	Mus_pahari
ENSRROG00000028206	RIF1	99	69.742	MGP_SPRETEiJ_G0024476	Rif1	100	69.742	Mus_spretus
ENSRROG00000028206	RIF1	100	79.783	ENSMPUG00000000371	RIF1	100	79.783	Mustela_putorius_furo
ENSRROG00000028206	RIF1	90	77.095	ENSMLUG00000003376	RIF1	100	77.095	Myotis_lucifugus
ENSRROG00000028206	RIF1	100	73.024	ENSNGAG00000009268	Rif1	100	72.691	Nannospalax_galili
ENSRROG00000028206	RIF1	68	50.804	ENSNBRG00000014257	rif1	73	50.157	Neolamprologus_brichardi
ENSRROG00000028206	RIF1	100	95.236	ENSNLEG00000010955	RIF1	100	95.236	Nomascus_leucogenys
ENSRROG00000028206	RIF1	82	78.222	ENSMEUG00000007601	-	88	78.222	Notamacropus_eugenii
ENSRROG00000028206	RIF1	99	72.119	ENSODEG00000003950	RIF1	99	72.482	Octodon_degus
ENSRROG00000028206	RIF1	65	50.345	ENSONIG00000013657	rif1	60	50.266	Oreochromis_niloticus
ENSRROG00000028206	RIF1	84	66.058	ENSOANG00000006078	-	56	75.141	Ornithorhynchus_anatinus
ENSRROG00000028206	RIF1	100	76.793	ENSOCUG00000017435	RIF1	100	76.613	Oryctolagus_cuniculus
ENSRROG00000028206	RIF1	64	47.809	ENSORLG00020001302	rif1	69	48.237	Oryzias_latipes_hni
ENSRROG00000028206	RIF1	62	48.837	ENSORLG00015000009	rif1	67	47.902	Oryzias_latipes_hsok
ENSRROG00000028206	RIF1	62	49.043	ENSOMEG00000021513	rif1	66	49.120	Oryzias_melastigma
ENSRROG00000028206	RIF1	99	81.411	ENSOGAG00000006141	RIF1	99	81.331	Otolemur_garnettii
ENSRROG00000028206	RIF1	100	79.315	ENSOARG00000008930	RIF1	100	79.315	Ovis_aries
ENSRROG00000028206	RIF1	100	95.350	ENSPPAG00000023754	RIF1	100	95.350	Pan_paniscus
ENSRROG00000028206	RIF1	100	79.485	ENSPPRG00000003618	RIF1	100	79.566	Panthera_pardus
ENSRROG00000028206	RIF1	100	79.525	ENSPTIG00000020652	RIF1	100	79.606	Panthera_tigris_altaica
ENSRROG00000028206	RIF1	100	95.431	ENSPTRG00000012534	RIF1	100	95.431	Pan_troglodytes
ENSRROG00000028206	RIF1	100	97.491	ENSPANG00000008525	RIF1	100	97.491	Papio_anubis
ENSRROG00000028206	RIF1	63	52.311	ENSPKIG00000004267	rif1	68	52.331	Paramormyrops_kingsleyae
ENSRROG00000028206	RIF1	65	46.742	ENSPMGG00000016141	rif1	80	46.742	Periophthalmus_magnuspinnatus
ENSRROG00000028206	RIF1	99	72.065	ENSPEMG00000000446	Rif1	99	72.013	Peromyscus_maniculatus_bairdii
ENSRROG00000028206	RIF1	99	59.591	ENSPCIG00000009185	RIF1	99	59.206	Phascolarctos_cinereus
ENSRROG00000028206	RIF1	55	51.772	ENSPFOG00000000554	-	66	51.679	Poecilia_formosa
ENSRROG00000028206	RIF1	62	51.530	ENSPFOG00000017804	rif1	67	51.535	Poecilia_formosa
ENSRROG00000028206	RIF1	62	51.210	ENSPLAG00000017945	rif1	71	51.214	Poecilia_latipinna
ENSRROG00000028206	RIF1	53	49.607	ENSPMEG00000006897	-	65	49.509	Poecilia_mexicana
ENSRROG00000028206	RIF1	55	64.894	ENSPREG00000018052	rif1	69	54.314	Poecilia_reticulata
ENSRROG00000028206	RIF1	100	95.712	ENSPPYG00000012846	RIF1	100	95.712	Pongo_abelii
ENSRROG00000028206	RIF1	83	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSRROG00000028206	RIF1	100	84.758	ENSPCOG00000027888	RIF1	100	84.758	Propithecus_coquereli
ENSRROG00000028206	RIF1	93	89.431	ENSPVAG00000014276	RIF1	95	89.431	Pteropus_vampyrus
ENSRROG00000028206	RIF1	73	48.541	ENSPNYG00000012940	rif1	83	48.466	Pundamilia_nyererei
ENSRROG00000028206	RIF1	62	54.516	ENSPNAG00000016685	rif1	64	54.516	Pygocentrus_nattereri
ENSRROG00000028206	RIF1	99	68.742	ENSRNOG00000054901	Rif1	100	68.690	Rattus_norvegicus
ENSRROG00000028206	RIF1	100	98.705	ENSRBIG00000003704	RIF1	100	98.705	Rhinopithecus_bieti
ENSRROG00000028206	RIF1	97	97.849	ENSSBOG00000029530	RIF1	100	97.849	Saimiri_boliviensis_boliviensis
ENSRROG00000028206	RIF1	99	59.752	ENSSHAG00000018552	RIF1	100	58.922	Sarcophilus_harrisii
ENSRROG00000028206	RIF1	63	53.672	ENSSFOG00015021539	rif1	75	53.430	Scleropages_formosus
ENSRROG00000028206	RIF1	66	50.157	ENSSMAG00000011704	rif1	65	49.728	Scophthalmus_maximus
ENSRROG00000028206	RIF1	62	50.850	ENSSDUG00000015632	rif1	78	48.268	Seriola_dumerili
ENSRROG00000028206	RIF1	50	50.000	ENSSLDG00000019531	rif1	54	48.073	Seriola_lalandi_dorsalis
ENSRROG00000028206	RIF1	63	84.068	ENSSARG00000007161	-	64	84.068	Sorex_araneus
ENSRROG00000028206	RIF1	88	71.257	ENSSPUG00000003062	RIF1	91	71.257	Sphenodon_punctatus
ENSRROG00000028206	RIF1	100	79.783	ENSSSCG00000016395	RIF1	100	79.340	Sus_scrofa
ENSRROG00000028206	RIF1	69	48.816	ENSTRUG00000015808	rif1	75	47.976	Takifugu_rubripes
ENSRROG00000028206	RIF1	68	49.036	ENSTNIG00000011538	rif1	78	47.581	Tetraodon_nigroviridis
ENSRROG00000028206	RIF1	83	89.873	ENSTBEG00000016082	RIF1	81	89.873	Tupaia_belangeri
ENSRROG00000028206	RIF1	100	80.540	ENSTTRG00000011190	RIF1	100	80.540	Tursiops_truncatus
ENSRROG00000028206	RIF1	90	79.661	ENSUAMG00000026385	RIF1	99	79.661	Ursus_americanus
ENSRROG00000028206	RIF1	100	80.540	ENSUMAG00000000337	RIF1	100	80.540	Ursus_maritimus
ENSRROG00000028206	RIF1	100	78.356	ENSVPAG00000002162	RIF1	100	78.082	Vicugna_pacos
ENSRROG00000028206	RIF1	100	78.445	ENSVVUG00000011293	RIF1	100	78.243	Vulpes_vulpes
ENSRROG00000028206	RIF1	99	43.757	ENSXETG00000004530	rif1	56	51.237	Xenopus_tropicalis
ENSRROG00000028206	RIF1	65	48.716	ENSXMAG00000000506	rif1	66	48.794	Xiphophorus_maculatus