EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000028454 (Gene tree)
Gene ID: 104682417
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 9387 bases
Position: chrKN299193.1:98867-108253
Accession: 104682417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000008109	Gar1	PF04410.14	1.1e-38	1	1
ENSRROP00000008110	Gar1	PF04410.14	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000032135	GAR1-201	1374	-	ENSRROP00000008109	198 (aa)	-	A0A2K6NV10
ENSRROT00000032139	GAR1-202	654	XM_010389064	ENSRROP00000008110	217 (aa)	XP_010387366	A0A2K6NV08

Gene Model

Click here to download ENSRROG00000028454's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000028454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000028454	GAR1	57	82.143	ENSRROG00000044348	-	53	81.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000028454	GAR1	100	99.539	ENSG00000109534	GAR1	100	99.539	Homo_sapiens
ENSRROG00000028454	GAR1	54	94.393	ENSAPOG00000019754	gar1	52	92.727	Acanthochromis_polyacanthus
ENSRROG00000028454	GAR1	55	98.165	ENSAMEG00000004605	GAR1	54	98.182	Ailuropoda_melanoleuca
ENSRROG00000028454	GAR1	54	94.393	ENSAOCG00000020947	gar1	51	92.727	Amphiprion_ocellaris
ENSRROG00000028454	GAR1	54	94.393	ENSAPEG00000001676	gar1	51	92.727	Amphiprion_percula
ENSRROG00000028454	GAR1	54	94.393	ENSATEG00000003733	gar1	51	92.727	Anabas_testudineus
ENSRROG00000028454	GAR1	54	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSRROG00000028454	GAR1	54	91.509	ENSACAG00000010031	GAR1	51	90.741	Anolis_carolinensis
ENSRROG00000028454	GAR1	100	98.624	ENSANAG00000021608	GAR1	100	98.624	Aotus_nancymaae
ENSRROG00000028454	GAR1	55	99.083	ENSBTAG00000000748	GAR1	52	99.091	Bos_taurus
ENSRROG00000028454	GAR1	100	98.165	ENSCJAG00000004041	GAR1	100	98.165	Callithrix_jacchus
ENSRROG00000028454	GAR1	54	99.057	ENSCAFG00020015566	GAR1	57	99.091	Canis_lupus_dingo
ENSRROG00000028454	GAR1	56	99.091	ENSCHIG00000016026	-	53	99.091	Capra_hircus
ENSRROG00000028454	GAR1	55	91.743	ENSTSYG00000026632	-	56	91.818	Carlito_syrichta
ENSRROG00000028454	GAR1	55	100.000	ENSTSYG00000013668	-	52	100.000	Carlito_syrichta
ENSRROG00000028454	GAR1	56	99.091	ENSCPOG00000004216	GAR1	51	99.091	Cavia_porcellus
ENSRROG00000028454	GAR1	100	98.624	ENSCCAG00000029372	GAR1	100	98.624	Cebus_capucinus
ENSRROG00000028454	GAR1	100	100.000	ENSCATG00000021854	GAR1	100	100.000	Cercocebus_atys
ENSRROG00000028454	GAR1	61	97.521	ENSCLAG00000005335	GAR1	99	94.937	Chinchilla_lanigera
ENSRROG00000028454	GAR1	100	100.000	ENSCSAG00000003922	GAR1	100	100.000	Chlorocebus_sabaeus
ENSRROG00000028454	GAR1	56	99.099	ENSCHOG00000007484	-	51	99.138	Choloepus_hoffmanni
ENSRROG00000028454	GAR1	54	92.453	ENSCPBG00000004310	GAR1	56	90.909	Chrysemys_picta_bellii
ENSRROG00000028454	GAR1	100	99.078	ENSCANG00000039262	GAR1	100	99.078	Colobus_angolensis_palliatus
ENSRROG00000028454	GAR1	55	96.330	ENSCGRG00001003919	Gar1	50	96.364	Cricetulus_griseus_chok1gshd
ENSRROG00000028454	GAR1	54	93.458	ENSCSEG00000003525	gar1	50	91.818	Cynoglossus_semilaevis
ENSRROG00000028454	GAR1	54	94.393	ENSCVAG00000002103	gar1	53	92.727	Cyprinodon_variegatus
ENSRROG00000028454	GAR1	54	91.589	ENSDARG00000076526	gar1	68	77.124	Danio_rerio
ENSRROG00000028454	GAR1	55	99.083	ENSDNOG00000037632	GAR1	56	99.091	Dasypus_novemcinctus
ENSRROG00000028454	GAR1	73	91.667	ENSDORG00000000482	Gar1	51	96.364	Dipodomys_ordii
ENSRROG00000028454	GAR1	87	53.947	FBgn0011824	CG4038	84	56.552	Drosophila_melanogaster
ENSRROG00000028454	GAR1	56	98.182	ENSEASG00005004658	GAR1	51	98.182	Equus_asinus_asinus
ENSRROG00000028454	GAR1	56	99.091	ENSECAG00000013624	GAR1	56	99.091	Equus_caballus
ENSRROG00000028454	GAR1	55	99.083	ENSFCAG00000040791	-	53	99.091	Felis_catus
ENSRROG00000028454	GAR1	87	53.333	ENSFCAG00000025841	-	78	53.901	Felis_catus
ENSRROG00000028454	GAR1	54	93.396	ENSFALG00000006445	GAR1	66	79.861	Ficedula_albicollis
ENSRROG00000028454	GAR1	56	91.892	ENSFHEG00000008068	gar1	51	91.818	Fundulus_heteroclitus
ENSRROG00000028454	GAR1	53	93.269	ENSGAGG00000004393	GAR1	56	90.826	Gopherus_agassizii
ENSRROG00000028454	GAR1	56	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSRROG00000028454	GAR1	100	99.078	ENSGGOG00000008681	GAR1	100	99.078	Gorilla_gorilla
ENSRROG00000028454	GAR1	54	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSRROG00000028454	GAR1	56	90.000	ENSIPUG00000003194	gar1	52	90.000	Ictalurus_punctatus
ENSRROG00000028454	GAR1	55	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSRROG00000028454	GAR1	56	89.189	ENSKMAG00000010402	gar1	52	90.000	Kryptolebias_marmoratus
ENSRROG00000028454	GAR1	80	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSRROG00000028454	GAR1	55	84.259	ENSMFAG00000003572	-	54	82.727	Macaca_fascicularis
ENSRROG00000028454	GAR1	100	100.000	ENSMFAG00000024592	GAR1	100	100.000	Macaca_fascicularis
ENSRROG00000028454	GAR1	100	100.000	ENSMMUG00000021225	GAR1	100	100.000	Macaca_mulatta
ENSRROG00000028454	GAR1	100	100.000	ENSMNEG00000042594	GAR1	100	100.000	Macaca_nemestrina
ENSRROG00000028454	GAR1	99	99.535	ENSMLEG00000002496	GAR1	99	99.535	Mandrillus_leucophaeus
ENSRROG00000028454	GAR1	55	96.330	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSRROG00000028454	GAR1	57	98.214	ENSMICG00000003326	GAR1	51	99.091	Microcebus_murinus
ENSRROG00000028454	GAR1	55	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSRROG00000028454	GAR1	54	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSRROG00000028454	GAR1	75	74.497	ENSMALG00000009672	gar1	52	92.035	Monopterus_albus
ENSRROG00000028454	GAR1	55	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSRROG00000028454	GAR1	56	96.364	ENSMUSG00000028010	Gar1	90	86.034	Mus_musculus
ENSRROG00000028454	GAR1	88	92.746	MGP_PahariEiJ_G0027076	Gar1	100	94.681	Mus_pahari
ENSRROG00000028454	GAR1	56	96.364	MGP_SPRETEiJ_G0026580	Gar1	90	86.034	Mus_spretus
ENSRROG00000028454	GAR1	55	99.083	ENSMPUG00000008615	GAR1	53	99.091	Mustela_putorius_furo
ENSRROG00000028454	GAR1	100	93.750	ENSMLUG00000003776	GAR1	100	93.750	Myotis_lucifugus
ENSRROG00000028454	GAR1	56	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSRROG00000028454	GAR1	100	97.696	ENSNLEG00000016578	GAR1	100	97.696	Nomascus_leucogenys
ENSRROG00000028454	GAR1	56	83.784	ENSNLEG00000034282	-	56	83.636	Nomascus_leucogenys
ENSRROG00000028454	GAR1	54	98.131	ENSODEG00000011083	GAR1	57	97.273	Octodon_degus
ENSRROG00000028454	GAR1	54	94.393	ENSONIG00000001085	gar1	50	92.727	Oreochromis_niloticus
ENSRROG00000028454	GAR1	55	99.083	ENSOCUG00000003901	GAR1	51	99.091	Oryctolagus_cuniculus
ENSRROG00000028454	GAR1	54	94.393	ENSORLG00000020583	gar1	50	92.727	Oryzias_latipes
ENSRROG00000028454	GAR1	54	94.393	ENSORLG00020008602	gar1	50	92.727	Oryzias_latipes_hni
ENSRROG00000028454	GAR1	54	94.393	ENSORLG00015017643	gar1	50	92.727	Oryzias_latipes_hsok
ENSRROG00000028454	GAR1	55	99.083	ENSOGAG00000004693	GAR1	52	99.091	Otolemur_garnettii
ENSRROG00000028454	GAR1	55	99.083	ENSOARG00000004910	GAR1	52	99.091	Ovis_aries
ENSRROG00000028454	GAR1	100	99.083	ENSPPAG00000014081	GAR1	100	99.083	Pan_paniscus
ENSRROG00000028454	GAR1	55	99.083	ENSPPRG00000023697	GAR1	53	99.091	Panthera_pardus
ENSRROG00000028454	GAR1	55	99.083	ENSPTIG00000021565	GAR1	53	99.091	Panthera_tigris_altaica
ENSRROG00000028454	GAR1	100	99.078	ENSPTRG00000016364	GAR1	100	99.078	Pan_troglodytes
ENSRROG00000028454	GAR1	88	81.651	ENSPTRG00000049340	-	66	73.913	Pan_troglodytes
ENSRROG00000028454	GAR1	100	99.078	ENSPANG00000000639	GAR1	100	99.078	Papio_anubis
ENSRROG00000028454	GAR1	84	73.653	ENSPKIG00000018991	gar1	66	85.034	Paramormyrops_kingsleyae
ENSRROG00000028454	GAR1	54	92.453	ENSPSIG00000002970	GAR1	50	90.909	Pelodiscus_sinensis
ENSRROG00000028454	GAR1	55	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSRROG00000028454	GAR1	55	92.593	ENSPCIG00000018912	GAR1	52	87.805	Phascolarctos_cinereus
ENSRROG00000028454	GAR1	54	93.458	ENSPFOG00000024155	gar1	52	91.818	Poecilia_formosa
ENSRROG00000028454	GAR1	54	93.458	ENSPLAG00000015056	gar1	52	91.818	Poecilia_latipinna
ENSRROG00000028454	GAR1	54	94.393	ENSPMEG00000009320	gar1	53	92.727	Poecilia_mexicana
ENSRROG00000028454	GAR1	100	99.078	ENSPPYG00000014996	GAR1	100	99.078	Pongo_abelii
ENSRROG00000028454	GAR1	54	100.000	ENSPCOG00000027049	GAR1	56	100.000	Propithecus_coquereli
ENSRROG00000028454	GAR1	85	95.906	ENSRNOG00000061146	Gar1	100	95.906	Rattus_norvegicus
ENSRROG00000028454	GAR1	57	82.143	ENSRBIG00000042411	-	53	81.818	Rhinopithecus_bieti
ENSRROG00000028454	GAR1	100	99.539	ENSRBIG00000019547	GAR1	100	99.539	Rhinopithecus_bieti
ENSRROG00000028454	GAR1	61	52.846	YHR089C	-	78	48.092	Saccharomyces_cerevisiae
ENSRROG00000028454	GAR1	97	96.410	ENSSBOG00000024785	GAR1	90	96.410	Saimiri_boliviensis_boliviensis
ENSRROG00000028454	GAR1	54	91.589	ENSSMAG00000009976	gar1	53	88.793	Scophthalmus_maximus
ENSRROG00000028454	GAR1	54	93.458	ENSSLDG00000023264	gar1	52	91.818	Seriola_lalandi_dorsalis
ENSRROG00000028454	GAR1	54	93.396	ENSSPUG00000008707	GAR1	61	91.818	Sphenodon_punctatus
ENSRROG00000028454	GAR1	54	94.393	ENSSPAG00000005974	gar1	54	91.935	Stegastes_partitus
ENSRROG00000028454	GAR1	56	99.091	ENSSSCG00000009137	GAR1	54	99.091	Sus_scrofa
ENSRROG00000028454	GAR1	50	89.899	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSRROG00000028454	GAR1	54	90.654	ENSTRUG00000020580	gar1	53	89.091	Takifugu_rubripes
ENSRROG00000028454	GAR1	53	93.269	ENSTNIG00000013023	gar1	63	91.818	Tetraodon_nigroviridis
ENSRROG00000028454	GAR1	54	99.057	ENSUAMG00000005652	GAR1	57	99.091	Ursus_americanus
ENSRROG00000028454	GAR1	55	99.083	ENSUMAG00000000776	GAR1	53	99.091	Ursus_maritimus
ENSRROG00000028454	GAR1	55	99.083	ENSVVUG00000017612	GAR1	57	99.091	Vulpes_vulpes