EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000028773 (Gene tree)
Gene ID: 104682557
Gene Symbol: APOBEC3G
Alias: -
Full Name: Rhinopithecus roxellana apolipoprotein B mRNA editing enzyme catalytic subunit 3G (APOBEC3G)%2C mRNA.
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 122247 bases
Position: chrKN299213.1:4460716-4582962
Accession: NM_001345905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000008655	APOBEC_N	PF08210.11	1e-96	1	2
ENSRROP00000008655	APOBEC_N	PF08210.11	1e-96	2	2
ENSRROP00000008659	APOBEC_N	PF08210.11	9.5e-87	1	2
ENSRROP00000008659	APOBEC_N	PF08210.11	9.5e-87	2	2
ENSRROP00000008649	APOBEC_N	PF08210.11	1.8e-47	1	1
ENSRROP00000008647	APOBEC_N	PF08210.11	1.8e-47	1	1
ENSRROP00000008646	APOBEC_N	PF08210.11	7.2e-47	1	1
ENSRROP00000008659	APOBEC_C	PF05240.14	1.3e-59	1	2
ENSRROP00000008659	APOBEC_C	PF05240.14	1.3e-59	2	2
ENSRROP00000008655	APOBEC_C	PF05240.14	6.4e-59	1	2
ENSRROP00000008655	APOBEC_C	PF05240.14	6.4e-59	2	2
ENSRROP00000008646	APOBEC_C	PF05240.14	1.7e-30	1	1
ENSRROP00000008647	APOBEC_C	PF05240.14	3.7e-30	1	1
ENSRROP00000008649	APOBEC_C	PF05240.14	3.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000032725	-	1016	XM_010389275	ENSRROP00000008647	199 (aa)	XP_010387577	A0A2K6NWJ5
ENSRROT00000032724	-	1068	-	ENSRROP00000008646	187 (aa)	-	A0A2K6NWK2
ENSRROT00000032727	-	600	-	ENSRROP00000008649	199 (aa)	-	A0A2K6NWJ4
ENSRROT00000032733	-	1530	XM_010389271	ENSRROP00000008655	382 (aa)	XP_010387573	A0A2K6NWJ6
ENSRROT00000032737	-	1556	XM_010389267	ENSRROP00000008659	379 (aa)	XP_010387569	A0A2K6NWK4

Gene Model

Click here to download ENSRROG00000028773's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro05170	Human immunodeficiency virus 1 infection	KEGG
rro05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000028773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000028773	APOBEC3G	99	62.304	ENSRROG00000028557	-	100	62.304
ENSRROG00000028773	APOBEC3G	51	35.417	ENSRROG00000033576	APOBEC1	57	42.857
ENSRROG00000028773	APOBEC3G	98	45.699	ENSRROG00000032866	AICDA	97	42.667
ENSRROG00000028773	APOBEC3G	97	36.598	ENSRROG00000024699	APOBEC3H	90	37.696
ENSRROG00000028773	APOBEC3G	99	53.826	ENSRROG00000029996	-	100	53.826
ENSRROG00000028773	APOBEC3G	97	30.288	ENSRROG00000030082	APOBEC2	88	31.429
ENSRROG00000028773	APOBEC3G	99	57.592	ENSRROG00000029045	APOBEC3C	100	57.592

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000028773	APOBEC3G	100	84.555	ENSG00000179750	APOBEC3B	100	84.555	Homo_sapiens
ENSRROG00000028773	APOBEC3G	100	85.027	ENSG00000128383	APOBEC3A	100	82.915	Homo_sapiens
ENSRROG00000028773	APOBEC3G	98	60.870	ENSCJAG00000012500	-	96	60.870	Callithrix_jacchus
ENSRROG00000028773	APOBEC3G	100	59.474	ENSTSYG00000035593	-	99	60.104	Carlito_syrichta
ENSRROG00000028773	APOBEC3G	100	65.263	ENSCCAG00000027450	-	97	65.782	Cebus_capucinus
ENSRROG00000028773	APOBEC3G	99	91.534	ENSCATG00000013527	-	100	86.634	Cercocebus_atys
ENSRROG00000028773	APOBEC3G	77	83.673	ENSCSAG00000018401	-	70	83.673	Chlorocebus_sabaeus
ENSRROG00000028773	APOBEC3G	99	91.005	ENSCSAG00000006445	-	77	91.005	Chlorocebus_sabaeus
ENSRROG00000028773	APOBEC3G	100	95.187	ENSCANG00000030513	-	100	94.975	Colobus_angolensis_palliatus
ENSRROG00000028773	APOBEC3G	100	82.199	ENSGGOG00000006721	APOBEC3B	100	82.199	Gorilla_gorilla
ENSRROG00000028773	APOBEC3G	99	86.911	ENSMFAG00000008980	APOBEC3A	98	86.911	Macaca_fascicularis
ENSRROG00000028773	APOBEC3G	99	89.947	ENSMMUG00000004015	-	98	90.104	Macaca_mulatta
ENSRROG00000028773	APOBEC3G	100	85.789	ENSMMUG00000042504	APOBEC3A	100	84.158	Macaca_mulatta
ENSRROG00000028773	APOBEC3G	99	88.182	ENSMNEG00000043211	-	95	88.182	Macaca_nemestrina
ENSRROG00000028773	APOBEC3G	100	91.623	ENSMLEG00000004809	-	100	91.623	Mandrillus_leucophaeus
ENSRROG00000028773	APOBEC3G	100	83.957	ENSNLEG00000015215	-	100	80.905	Nomascus_leucogenys
ENSRROG00000028773	APOBEC3G	100	86.911	ENSPPAG00000009288	APOBEC3B	100	86.911	Pan_paniscus
ENSRROG00000028773	APOBEC3G	100	83.422	ENSPTRG00000014384	APOBEC3B	100	81.407	Pan_troglodytes
ENSRROG00000028773	APOBEC3G	99	90.341	ENSPANG00000006941	APOBEC3B	100	83.663	Papio_anubis
ENSRROG00000028773	APOBEC3G	100	85.079	ENSPPYG00000011831	-	100	85.079	Pongo_abelii
ENSRROG00000028773	APOBEC3G	76	60.135	ENSPCOG00000017606	-	95	60.135	Propithecus_coquereli
ENSRROG00000028773	APOBEC3G	100	100.000	ENSRBIG00000042829	-	100	100.000	Rhinopithecus_bieti